FFCP PHASE1:Hg19::chr11:62472992..62473012,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:62472992..62473012,- to FFCP PHASE1:Hg19::chr11:62472992..62473012,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_CU678804,CU680238,CU692014_5end | |||
|cluster_id=chr11:62472992..62473012,- | |||
|description=CAGE_peak_4_at_CU678804_5end,CAGE_peak_4_at_CU680238_5end,CAGE_peak_4_at_CU692014_5end | |||
|id=chr11:62472992..62473012,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;1.98e-14;3!CL:0002616;3.11e-11;1!CL:0000136;1.70e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,2.42e-14,3;CL:0002616,1.97e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006222;3.11e-11;1!UBERON:0005425;3.11e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.82e-17!115;UBERON:0001049!2.96e-11!57;UBERON:0005068!2.96e-11!57;UBERON:0006241!2.96e-11!57;UBERON:0007135!2.96e-11!57;UBERON:0002616!2.52e-10!59;UBERON:0001017!5.62e-10!82;UBERON:0002780!8.59e-10!41;UBERON:0001890!8.59e-10!41;UBERON:0006240!8.59e-10!41;UBERON:0005743!1.16e-09!86;UBERON:0003080!2.26e-09!42;UBERON:0000073!2.46e-09!94;UBERON:0001016!2.46e-09!94;UBERON:0000955!9.01e-09!69;UBERON:0006238!9.01e-09!69;UBERON:0002020!1.41e-07!34;UBERON:0003528!1.41e-07!34;UBERON:0002346!1.52e-07!90;UBERON:0003075!2.24e-07!86;UBERON:0007284!2.24e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.98e-14;3!UBERON:0000941;3.11e-11;1!UBERON:0001785;3.11e-11;1!UBERON:0002464;3.11e-11;1!UBERON:0004904;3.11e-11;1!UBERON:0001021;3.11e-11;1!UBERON:0002072;5.06e-09;5!UBERON:0002021;7.54e-09;5!UBERON:0001013;5.39e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.42e-14,3;UBERON:0000941,2.42e-11,1;UBERON:0001785,2.42e-11,1;UBERON:0002464,2.42e-11,1;UBERON:0004904,2.42e-11,1;UBERON:0001021,2.42e-11,1;UBERON:0003902,2.42e-11,1;UBERON:0005425,2.42e-11,1;UBERON:0002072,5.72e-09,5;UBERON:0002021,1.21e-08,5;UBERON:0001013,5.23e-07,14 | |||
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| ||
|short_description=p4@CU678804,p4@CU680238,p4@CU692014 | |||
}} | }} |
Latest revision as of 23:47, 23 July 2015
Short description: | p4@CU678804, p4@CU680238, p4@CU692014 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU678804_5end, CAGE_peak_4_at_CU680238_5end, CAGE_peak_4_at_CU692014_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_CU678804, CU680238, CU692014_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 2.42e-14 | 3 |
perirenal adipocyte cell | 1.97e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.42e-14 | 3 |
cranial nerve II | 2.42e-11 | 1 |
cranial nerve | 2.42e-11 | 1 |
nerve trunk | 2.42e-11 | 1 |
nerve connecting eye with brain | 2.42e-11 | 1 |
nerve | 2.42e-11 | 1 |
retinal neural layer | 2.42e-11 | 1 |
presumptive neural retina | 2.42e-11 | 1 |
hypodermis | 5.72e-09 | 5 |
occipital lobe | 1.21e-08 | 5 |
adipose tissue | 5.23e-07 | 14 |