FFCP PHASE1:Hg19::chr11:65769946..65769992,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:65769946..65769992,+ to FFCP PHASE1:Hg19::chr11:65769946..65769992,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8815 | |EntrezGene=8815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17397 | |HGNC=17397 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000524628_5end | |||
|cluster_id=chr11:65769946..65769992,+ | |||
|description=CAGE_peak_1_at_BANF1_5end | |||
|id=chr11:65769946..65769992,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.12e-30!679;CL:0000004!4.12e-30!679;CL:0000255!4.12e-30!679;CL:0000012!4.36e-30!682;CL:0000055!2.20e-17!180;CL:0000144!8.27e-17!625;CL:0000003!1.83e-16!722;CL:0002321!6.62e-15!248;CL:0000220!8.31e-15!246;CL:0000066!1.06e-14!254;CL:0002371!3.26e-13!591;CL:0000222!5.45e-11!119;CL:0000063!1.02e-09!578;CL:0000183!2.05e-08!59;CL:0000393!1.50e-07!60;CL:0000211!1.50e-07!60;CL:0000680!5.62e-07!57;CL:0000056!5.62e-07!57;CL:0000355!5.62e-07!57;CL:1000449!6.65e-07!16;CL:0000187!9.87e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.78e-08;15!CL:1000497;2.55e-07;17!CL:0002518;2.55e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.58e-15,253;CL:0002321,9.86e-15,250;CL:0000222,9.70e-11,121;CL:1000449,7.70e-08,15;CL:1000497,2.50e-07,17;CL:0002518,2.50e-07,17;CL:0000393,3.65e-07,61;CL:0000211,3.65e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.82e-12!239;DOID:162!4.68e-12!235;DOID:0050687!1.63e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.82e-12,239;DOID:162,4.68e-12,235;DOID:0050687,1.63e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0005256!9.46e-12!143;UBERON:0003104!8.70e-11!238;UBERON:0009142!8.70e-11!238;UBERON:0002100!1.51e-09!216;UBERON:0000914!5.35e-09!83;UBERON:0002329!5.35e-09!83;UBERON:0003077!5.35e-09!83;UBERON:0003059!5.35e-09!83;UBERON:0007282!5.35e-09!83;UBERON:0009618!5.35e-09!83;UBERON:0007285!5.35e-09!83;UBERON:0004290!4.04e-08!70;UBERON:0000486!7.55e-08!82;UBERON:0000490!2.82e-07!138;UBERON:0001134!6.49e-07!61;UBERON:0002036!6.49e-07!61;UBERON:0003082!6.49e-07!61;UBERON:0004211!6.65e-07!16;UBERON:0001285!6.65e-07!16;UBERON:0007684!6.65e-07!16;UBERON:0003220!6.65e-07!16;UBERON:0004208!6.65e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.78e-08;15!UBERON:0004819;7.78e-08;15!UBERON:0001285;7.78e-08;15!UBERON:0007684;7.78e-08;15!UBERON:0000353;4.41e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.58e-10,78;UBERON:0003104,2.57e-09,160;UBERON:0009142,2.57e-09,160;UBERON:0002100,3.61e-09,199;UBERON:0005256,1.59e-08,122;UBERON:0000490,3.95e-08,148;UBERON:0004211,7.70e-08,15;UBERON:0009773,7.70e-08,15;UBERON:0001231,7.70e-08,15;UBERON:0001285,7.70e-08,15;UBERON:0007684,7.70e-08,15;UBERON:0004208,7.70e-08,15;UBERON:0002329,9.50e-08,71;UBERON:0003059,9.50e-08,71;UBERON:0007282,9.50e-08,71;UBERON:0004290,9.50e-08,71;UBERON:0009618,9.50e-08,71;UBERON:0000486,1.62e-07,83;UBERON:0007524,2.40e-07,73;UBERON:0003077,2.54e-07,72;UBERON:0007285,2.54e-07,72;UBERON:0006555,3.40e-07,16;UBERON:0004819,3.40e-07,16;UBERON:0000353,4.37e-07,15;UBERON:0006554,4.98e-07,47;UBERON:0001008,6.09e-07,48 | |||
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| ||
|short_description=p1@BANF1 | |||
}} | }} |
Latest revision as of 12:44, 19 September 2015
Short description: | p1@BANF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BANF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524628_5end |
EntrezGene: | BANF1 |
HGNC: | 17397 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.58e-15 | 253 |
embryonic cell | 9.86e-15 | 250 |
mesodermal cell | 9.70e-11 | 121 |
epithelial cell of nephron | 7.70e-08 | 15 |
kidney cell | 2.50e-07 | 17 |
kidney epithelial cell | 2.50e-07 | 17 |
electrically responsive cell | 3.65e-07 | 61 |
electrically active cell | 3.65e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.58e-10 | 78 |
mesenchyme | 2.57e-09 | 160 |
entire embryonic mesenchyme | 2.57e-09 | 160 |
trunk | 3.61e-09 | 199 |
trunk mesenchyme | 1.59e-08 | 122 |
unilaminar epithelium | 3.95e-08 | 148 |
nephron epithelium | 7.70e-08 | 15 |
renal tubule | 7.70e-08 | 15 |
nephron tubule | 7.70e-08 | 15 |
nephron | 7.70e-08 | 15 |
uriniferous tubule | 7.70e-08 | 15 |
nephrogenic mesenchyme | 7.70e-08 | 15 |
somite | 9.50e-08 | 71 |
presomitic mesoderm | 9.50e-08 | 71 |
presumptive segmental plate | 9.50e-08 | 71 |
dermomyotome | 9.50e-08 | 71 |
trunk paraxial mesoderm | 9.50e-08 | 71 |
multilaminar epithelium | 1.62e-07 | 83 |
dense mesenchyme tissue | 2.40e-07 | 73 |
paraxial mesoderm | 2.54e-07 | 72 |
presumptive paraxial mesoderm | 2.54e-07 | 72 |
excretory tube | 3.40e-07 | 16 |
kidney epithelium | 3.40e-07 | 16 |
parenchyma | 4.37e-07 | 15 |
urinary system structure | 4.98e-07 | 47 |
renal system | 6.09e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.82e-12 | 239 |
cancer | 4.68e-12 | 235 |
cell type cancer | 1.63e-07 | 143 |