FFCP PHASE1:Hg19::chr12:53243277..53243289,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=196374 | |EntrezGene=196374 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28926 | |HGNC=28926 | ||
|TSSclassifier=strong | |||
|UniProt=F8VS93 | |UniProt=F8VS93 | ||
|association_with_transcript=-401bp_to_ENST00000547110_5end | |||
|cluster_id=chr12:53243277..53243289,- | |||
|coexpression_cluster_id=C1674 | |||
|description=CAGE_peak_2_at_KRT78_5end | |||
|id=chr12:53243277..53243289,- | |||
|ontology_enrichment_celltype=CL:0000840!1.54e-19!5;CL:0001029!1.54e-19!5;CL:0001014!8.66e-16!2;CL:0001016!8.66e-16!2;CL:0000990!4.27e-13!8;CL:0000451!9.62e-11!10;CL:0000622!6.67e-07!5;CL:0000453!7.94e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.78e-15;2!CL:0001016;1.78e-15;2!CL:0002623;6.73e-11;3!CL:0000622;4.79e-07;5!CL:0000453;5.70e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.78e-15,2;CL:0001016,1.78e-15,2;CL:0002623,6.73e-11,3;CL:0000622,4.79e-07,5;CL:0000453,5.70e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.16e-29;1!UBERON:0008814;1.43e-15;2!UBERON:0010056;1.43e-15;2 | |||
|ontology_enrichment_disease=DOID:3151!1.59e-08!1;DOID:3149!1.59e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!5.98e-18!10;UBERON:0009145!5.98e-18!10;UBERON:0000974!2.91e-17!10;UBERON:0006562!2.63e-16!11;UBERON:0000341!2.99e-15!2;UBERON:0003127!6.14e-15!2;UBERON:0000166!4.02e-12!21;UBERON:0001723!4.59e-11!3;UBERON:0001033!4.59e-11!3;UBERON:0010056!4.59e-11!3;UBERON:0001557!2.30e-09!19;UBERON:0000165!5.87e-09!28;UBERON:0000930!5.87e-09!28;UBERON:0007029!7.56e-09!1;UBERON:0002372!8.15e-09!1;UBERON:0001961!8.15e-09!1;UBERON:0001744!8.15e-09!1;UBERON:0001735!8.15e-09!1;UBERON:0000989!1.18e-08!1;UBERON:0008811!1.18e-08!1;UBERON:0006258!1.18e-08!1;UBERON:0005876!1.18e-08!1;UBERON:0004874!1.18e-08!1;UBERON:0001004!2.85e-08!72;UBERON:0000014!2.85e-08!4;UBERON:0008814!7.58e-08!15;UBERON:0002370!9.51e-08!4;UBERON:0005058!9.51e-08!4;UBERON:0009113!9.51e-08!4;UBERON:0003295!9.51e-08!4;UBERON:0005562!9.51e-08!4;UBERON:0000161!4.68e-07!35;UBERON:0003408!6.61e-07!10;UBERON:0000078!7.30e-07!18;UBERON:0000072!8.12e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.01e-38;3!UBERON:0001033;1.01e-38;3!UBERON:0002372;3.16e-29;1!UBERON:0007029;3.16e-29;1!UBERON:0001961;3.16e-29;1!UBERON:0001744;3.16e-29;1!UBERON:0001042;3.16e-29;1!UBERON:0001735;3.16e-29;1!UBERON:0000165;9.84e-17;28!UBERON:0006562;2.37e-15;2!UBERON:0001043;1.09e-10;3!UBERON:0001041;4.21e-09;14!UBERON:0001555;2.01e-08;54!UBERON:0000014;2.43e-08;4!UBERON:0004921;1.41e-07;33!UBERON:0000161;6.01e-07;19!UBERON:0000166;6.01e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.01e-38,3;UBERON:0001033,1.01e-38,3;UBERON:0010056,1.01e-38,3;UBERON:0007029,2.37e-29,1;UBERON:0002372,3.16e-29,1;UBERON:0001961,3.16e-29,1;UBERON:0001744,3.16e-29,1;UBERON:0001735,3.16e-29,1;UBERON:0001042,3.92e-26,10;UBERON:0009145,3.92e-26,10;UBERON:0006562,7.72e-24,11;UBERON:0000166,3.95e-21,22;UBERON:0000165,3.55e-16,29;UBERON:0000930,3.55e-16,29;UBERON:0001557,3.79e-14,19;UBERON:0000161,3.87e-13,36;UBERON:0001043,1.20e-10,3;UBERON:0009143,1.20e-10,3;UBERON:0001444,8.77e-10,49;UBERON:0000033,1.29e-08,56;UBERON:0001041,1.81e-08,87;UBERON:0000014,2.26e-08,4;UBERON:0000153,8.01e-08,62;UBERON:0007811,8.01e-08,62;UBERON:0003102,1.75e-07,99;UBERON:0008814,2.60e-07,18 | |||
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|short_description=p2@KRT78 | |||
}} | }} |
Latest revision as of 01:00, 19 September 2015
Short description: | p2@KRT78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT78_5end |
Coexpression cluster: | C1674_tongue_salivary_pagetoid_uterus_cervix_esophagus_skin |
Association with transcript: | -401bp_to_ENST00000547110_5end |
EntrezGene: | KRT78 |
HGNC: | 28926 |
UniProt: | F8VS93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.78e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.78e-15 | 2 |
acinar cell of salivary gland | 6.73e-11 | 3 |
acinar cell | 4.79e-07 | 5 |
Langerhans cell | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.01e-38 | 3 |
gustatory system | 1.01e-38 | 3 |
future tongue | 1.01e-38 | 3 |
surface | 2.37e-29 | 1 |
tonsil | 3.16e-29 | 1 |
mucosa-associated lymphoid tissue | 3.16e-29 | 1 |
lymphoid tissue | 3.16e-29 | 1 |
tonsillar ring | 3.16e-29 | 1 |
chordate pharynx | 3.92e-26 | 10 |
pharyngeal region of foregut | 3.92e-26 | 10 |
pharynx | 7.72e-24 | 11 |
oral opening | 3.95e-21 | 22 |
mouth | 3.55e-16 | 29 |
stomodeum | 3.55e-16 | 29 |
upper respiratory tract | 3.79e-14 | 19 |
orifice | 3.87e-13 | 36 |
esophagus | 1.20e-10 | 3 |
esophageal region | 1.20e-10 | 3 |
subdivision of head | 8.77e-10 | 49 |
head | 1.29e-08 | 56 |
foregut | 1.81e-08 | 87 |
zone of skin | 2.26e-08 | 4 |
anterior region of body | 8.01e-08 | 62 |
craniocervical region | 8.01e-08 | 62 |
surface structure | 1.75e-07 | 99 |
pharyngeal arch system | 2.60e-07 | 18 |