FFCP PHASE1:Hg19::chr12:53345639..53345644,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:53345639..53345644,+ to FFCP PHASE1:Hg19::chr12:53345639..53345644,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3875 | |EntrezGene=3875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6430 | |HGNC=6430 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=113bp_to_ENST00000548496_5end | |||
|cluster_id=chr12:53345639..53345644,+ | |||
|description=CAGE_peak_8_at_KRT18_5end | |||
|id=chr12:53345639..53345644,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.34e-35!254;CL:0000223!9.32e-11!59;CL:0000077!3.98e-10!19;CL:0002076!7.41e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002097;3.65e-13;2!CL:0000082;1.05e-10;19!CL:0000174;4.59e-09;3!CL:0002577;4.59e-09;3!CL:0002681;5.59e-08;12!CL:0002584;5.59e-08;12!CL:0000349;1.26e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,2.12e-13,2;CL:0000066,5.23e-13,253;CL:0000082,1.21e-10,19;CL:0000174,3.21e-09,3;CL:0002577,5.40e-09,3;CL:0002681,5.21e-08,12;CL:0002584,5.21e-08,12;CL:0000349,1.36e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;8.45e-09;30 | |||
|ontology_enrichment_disease=DOID:305!5.40e-32!106;DOID:0050687!6.43e-28!143;DOID:162!1.13e-19!235;DOID:14566!1.30e-18!239;DOID:299!1.14e-11!25;DOID:7!2.41e-09!39;DOID:170!3.26e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:0050615;8.13e-13;16!DOID:299;4.80e-11;25!DOID:1324;9.98e-10;15!DOID:0050619;3.50e-07;1!DOID:1357;3.50e-07;1!DOID:5093;3.51e-07;4!DOID:1612;3.51e-07;4!DOID:3119;6.02e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.65e-14,106;DOID:0050615,7.19e-13,16;DOID:299,3.96e-11,25;DOID:0050687,8.83e-10,143;DOID:1324,9.74e-10,15;DOID:0050619,2.67e-07,1;DOID:1357,2.67e-07,1;DOID:5093,3.21e-07,4;DOID:1612,3.21e-07,4;DOID:3119,5.14e-07,14;DOID:162,8.39e-07,235;DOID:0050686,9.55e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0005911!5.96e-14!82;UBERON:0004119!1.02e-13!169;UBERON:0000925!1.02e-13!169;UBERON:0006595!1.02e-13!169;UBERON:0005177!1.35e-12!107;UBERON:0009569!1.71e-12!113;UBERON:0000466!1.82e-12!126;UBERON:0000077!2.65e-12!130;UBERON:0001007!4.30e-12!155;UBERON:0001555!4.30e-12!155;UBERON:0007026!4.30e-12!155;UBERON:0004921!6.34e-12!129;UBERON:0004185!6.34e-12!129;UBERON:0003929!1.77e-09!54;UBERON:0002100!2.31e-09!216;UBERON:0002417!4.70e-09!61;UBERON:0000916!4.70e-09!61;UBERON:0005153!4.85e-09!37;UBERON:0005172!1.01e-08!55;UBERON:0005173!1.01e-08!55;UBERON:0000464!2.53e-08!104;UBERON:0001041!4.16e-08!98;UBERON:0005631!5.15e-08!14;UBERON:0000158!5.15e-08!14;UBERON:0003104!7.40e-08!238;UBERON:0009142!7.40e-08!238;UBERON:0007499!8.11e-08!25;UBERON:0006554!8.45e-08!44;UBERON:0001008!1.80e-07!45;UBERON:0003064!2.30e-07!37;UBERON:0009856!2.48e-07!26;UBERON:0005157!3.80e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001851;1.05e-13;15!UBERON:0004802;1.05e-10;19!UBERON:0000115;1.05e-10;19!UBERON:0002048;3.60e-09;22!UBERON:0004807;3.60e-09;22!UBERON:0000117;3.60e-09;22!UBERON:0000171;3.60e-09;22!UBERON:0000170;3.60e-09;22!UBERON:0002369;4.59e-09;3!UBERON:0001235;4.59e-09;3!UBERON:0006858;4.59e-09;3!UBERON:0002294;2.87e-08;7!UBERON:0001173;2.87e-08;7!UBERON:0001225;5.59e-08;12!UBERON:0008987;5.59e-08;12!UBERON:0005177;1.34e-07;99!UBERON:0005178;3.23e-07;34!UBERON:0002224;3.23e-07;34!UBERON:0007195;3.50e-07;1!UBERON:0001764;3.50e-07;1!UBERON:0004913;3.50e-07;1!UBERON:0003703;3.50e-07;1!UBERON:0001825;3.50e-07;1!UBERON:0001174;3.50e-07;1!UBERON:0004914;3.50e-07;1!UBERON:0001987;5.34e-07;4!UBERON:0005181;7.13e-07;35!UBERON:0001052;9.08e-07;4!UBERON:0002394;9.08e-07;4!UBERON:0003928;9.08e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,7.82e-14,15;UBERON:0009569,2.26e-13,112;UBERON:0005177,1.31e-11,101;UBERON:0004802,1.21e-10,19;UBERON:0000115,1.21e-10,19;UBERON:0005631,2.18e-10,14;UBERON:0000158,2.18e-10,14;UBERON:0005911,1.38e-09,82;UBERON:0002369,3.21e-09,3;UBERON:0001235,3.21e-09,3;UBERON:0006858,3.21e-09,3;UBERON:0002048,4.07e-09,22;UBERON:0000117,4.07e-09,22;UBERON:0000171,4.07e-09,22;UBERON:0000170,4.07e-09,22;UBERON:0005597,4.07e-09,22;UBERON:0000118,4.07e-09,22;UBERON:0002100,8.97e-09,199;UBERON:0003124,3.39e-08,7;UBERON:0004119,4.06e-08,160;UBERON:0000925,4.06e-08,160;UBERON:0006595,4.06e-08,160;UBERON:0004921,4.98e-08,118;UBERON:0001225,5.21e-08,12;UBERON:0008987,5.21e-08,12;UBERON:0000915,9.09e-08,52;UBERON:0000058,1.23e-07,19;UBERON:0005178,1.42e-07,34;UBERON:0002224,1.42e-07,34;UBERON:0005172,1.72e-07,54;UBERON:0005173,1.72e-07,54;UBERON:0004913,1.74e-07,1;UBERON:0003703,1.74e-07,1;UBERON:0001174,1.74e-07,1;UBERON:0004914,1.74e-07,1;UBERON:0001041,1.92e-07,87;UBERON:0005181,2.48e-07,35;UBERON:0001764,2.67e-07,1;UBERON:0001825,2.67e-07,1;UBERON:0004807,4.82e-07,28;UBERON:0001007,4.86e-07,145;UBERON:0001555,4.86e-07,145;UBERON:0007026,4.86e-07,145;UBERON:0007195,5.84e-07,1;UBERON:0001987,6.03e-07,4;UBERON:0004340,6.03e-07,4;UBERON:0005153,6.15e-07,37;UBERON:0001052,9.38e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,1.96597234917155,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.357198913136319,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0.163461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0.348581828608555,0,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.983907508344908,0.686271241194102,0,0,0,0.185176890317059,0,0,0,0,0.469634776943287,0,0,0,3.95102198979638,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0.783204629850962,0,0,0,0,1.21251028578504,3.32870879020994,0,0,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0,0,0,0.725156697549733,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,1.80479845162965,1.30926073077505,0,0,0.211103257785751,1.13733384070897,0,0.215915916102139,0,1.35473218771926,0.501689773854853,0.509752546090077,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.38126038784765,0.255897791311334,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.673554789078584,0,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,1.70481688083848,0.47748896947538,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0.269605053441981,1.43216939740487,0,0,0,1.11136990144637,0,0,0,2.60427761085233,0.437299999980979,0,0.1137934482855,0.508507300585533,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0.46112780877612,0.269272933229316,0.651884231532048,1.27600463892768,0.183195186803725,0,0,0,0,0,0,0.167821586975843,0,0,0.421996129056054,3.10142335502381,1.27217764290547,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0.978323094660449,0.971121518136371,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0.313932918407225,0,0,0,0.173559738335131,0.195984794828755,0.261177619741208,0,0,0.19351266257817,0.219267951258557,0.246346371159628,0,0.706049013532002,0,0,0,0,3.71547627196126,0.160317640503067,0,0,0.144090417154106,0,0,0.288109595976299,0.248505071130865,0,0.135904206073614,0.418411385249333,0.203996435272644,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0.0787831823072236,0.164831716762333,0.13480708770837,0.492137407573744,0,0,0,0.482259445395058,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.511164065356265,0,0.146552233678082,0,0.129282956361551,0,3.07956308191793,1.40963004463334,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,1.41348686625211,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,1.73357847366573,3.21662387062389,0.521988583930423,0.453411851024545,0.926089897295336,0.734210113519403,0.179088841081487,1.54400723580486,0.219284049578707,0.176689145945881,1.15748422962549,0.844712203265363,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.633936370075881,0,0,0,0.567515953566836,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0.346576998451015,0,0,0,0,0,0,0.261906694481422,0.327543835020193,1.92212912082159,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0.354809480650555,0,0.171488009437418,0,0,0.590969204419841,1.33477682270483,0.078493092850514,0,1.40136081656895,0,0.431855182437243,0.47775168788705,0,0,0.697448552208751,0.347716544605159,0,0.207216164163037,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,0.111855431797792,2.0611549059201,0.975343399858155,0,0,0,0,0,0,0,0.33883824611688,0,0,0.154348316215889,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0.178553938605658,0,1.28386186702669,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0.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| ||
|short_description=p8@KRT18 | |||
}} | }} |
Latest revision as of 01:16, 19 September 2015
Short description: | p8@KRT18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KRT18_5end |
Coexpression cluster: | NA |
Association with transcript: | 113bp_to_ENST00000548496_5end |
EntrezGene: | KRT18 |
HGNC: | 6430 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 2.12e-13 | 2 |
epithelial cell | 5.23e-13 | 253 |
epithelial cell of lung | 1.21e-10 | 19 |
steroid hormone secreting cell | 3.21e-09 | 3 |
placental epithelial cell | 5.40e-09 | 3 |
kidney cortical cell | 5.21e-08 | 12 |
renal cortical epithelial cell | 5.21e-08 | 12 |
extraembryonic cell | 1.36e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.65e-14 | 106 |
respiratory system cancer | 7.19e-13 | 16 |
adenocarcinoma | 3.96e-11 | 25 |
cell type cancer | 8.83e-10 | 143 |
lung cancer | 9.74e-10 | 15 |
paranasal sinus cancer | 2.67e-07 | 1 |
maxillary sinus cancer | 2.67e-07 | 1 |
thoracic cancer | 3.21e-07 | 4 |
breast cancer | 3.21e-07 | 4 |
gastrointestinal system cancer | 5.14e-07 | 14 |
cancer | 8.39e-07 | 235 |
organ system cancer | 9.55e-07 | 137 |