FFCP PHASE1:Hg19::chr13:49107182..49107193,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:49107182..49107193,- to FFCP PHASE1:Hg19::chr13:49107182..49107193,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1102 | |EntrezGene=1102 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1914 | |HGNC=1914 | ||
|TSSclassifier=strong | |||
|UniProt=B4DPP7 | |UniProt=B4DPP7 | ||
|association_with_transcript=19bp_to_ENST00000544904_5end | |||
|cluster_id=chr13:49107182..49107193,- | |||
|description=CAGE_peak_5_at_RCBTB2_5end | |||
|id=chr13:49107182..49107193,- | |||
|ontology_enrichment_celltype=CL:0000766!8.43e-25!76;CL:0002009!1.96e-24!65;CL:0002057!1.50e-23!42;CL:0002194!3.20e-23!63;CL:0000576!3.20e-23!63;CL:0000040!3.20e-23!63;CL:0000559!3.20e-23!63;CL:0000557!4.51e-23!71;CL:0000839!1.79e-21!70;CL:0000860!6.46e-20!45;CL:0000763!8.29e-20!112;CL:0000049!8.29e-20!112;CL:0000738!7.34e-16!140;CL:0002032!1.59e-14!165;CL:0000837!1.59e-14!165;CL:0002031!1.85e-14!124;CL:0002087!1.87e-14!119;CL:0000037!5.14e-14!172;CL:0000566!5.14e-14!172;CL:0000988!1.75e-12!182;CL:0002320!1.73e-07!365;CL:0000134!7.99e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.58e-26;39!CL:0000234;2.58e-26;39!CL:0000576;4.93e-26;48!CL:0000860;5.29e-26;33!CL:0002057;5.29e-26;33!CL:0000766;4.25e-20;69!CL:0000763;9.52e-11;100!CL:0002393;2.65e-08;6!CL:0002397;2.65e-08;6!CL:0002087;1.09e-07;104!CL:0000235;1.62e-07;6!CL:0000738;2.73e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.81e-45,48;CL:0000234,2.81e-45,48;CL:0002009,5.42e-43,61;CL:0002194,1.28e-40,59;CL:0000576,1.28e-40,59;CL:0000040,1.28e-40,59;CL:0000559,1.28e-40,59;CL:0000766,2.06e-40,72;CL:0000860,7.74e-39,42;CL:0002057,7.74e-39,42;CL:0000557,1.55e-37,67;CL:0000839,1.70e-34,66;CL:0000763,5.37e-30,108;CL:0000049,5.37e-30,108;CL:0000738,1.21e-24,136;CL:0002087,3.55e-23,115;CL:0002031,7.99e-23,120;CL:0002032,9.45e-22,161;CL:0000837,9.45e-22,161;CL:0000037,1.17e-20,168;CL:0000988,3.64e-19,177;CL:0002393,1.83e-11,9;CL:0002397,1.83e-11,9;CL:0002320,2.33e-08,361;CL:0000134,4.02e-08,354;CL:0000235,9.78e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.02e-28;42!CL:0000049;3.29e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-22!102;UBERON:0003061!1.51e-22!102;UBERON:0002193!5.65e-22!112;UBERON:0002371!2.73e-18!80;UBERON:0004765!4.86e-17!101;UBERON:0001434!4.86e-17!101;UBERON:0001474!2.58e-16!86;UBERON:0002405!5.37e-13!115;UBERON:0002204!3.22e-09!167;UBERON:0007023!5.41e-08!115;UBERON:0002384!2.85e-07!375;UBERON:0003081!8.17e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.90e-34,98;UBERON:0003061,4.90e-34,98;UBERON:0002193,1.47e-33,108;UBERON:0002371,5.35e-31,76;UBERON:0002405,5.74e-28,93;UBERON:0001474,1.85e-27,82;UBERON:0004765,3.24e-27,90;UBERON:0001434,1.04e-22,100;UBERON:0003081,2.02e-14,203;UBERON:0002204,7.03e-13,167;UBERON:0002384,3.07e-08,371;UBERON:0000926,6.24e-07,315;UBERON:0004120,6.24e-07,315;UBERON:0006603,6.24e-07,315 | |||
|phase1_expression=0.908391896352783,1.07050261945492,0.704772020479856,0,0.893922188854576,0.872338524100369,2.53299878168311,0,0.783556884599516,0,0,0,0,0.618831764800233,2.65117900582333,0,1.20538905604795,0,0,0.61560529038394,0.408001382488506,0,0,0,0.125542639594803,0.61130724598361,0.821005894499457,0.314843125254717,1.18009283054671,0.383829398097213,1.23852898652861,0,0.30120591877825,0,0.232401601740905,0.142169232487422,0.587200878669695,2.21598163412751,2.00544447470142,2.60413044859022,5.37397138175818,2.91504299417082,3.60605794687861,5.52513307362346,6.42389104270976,4.60909716256851,2.78914844286822,2.05583944010913,0.929119112685311,3.16461631554365,1.7931249457037,2.83778675866302,1.37898272294647,0.645484683583826,4.06279459783025,3.57660445130949,2.72906150057846,3.37085226667627,1.22433556948361,0.962787081228281,0.639337125799041,3.29851300186716,5.38551875578406,7.6720455095885,1.45104619314292,3.40431134814684,2.4912889959823,2.51248665256743,2.60741459210101,4.77815458351257,2.42159801053347,1.10483290796269,3.16462387440884,3.38008458099107,2.76385589954557,3.98351426465914,4.38081661471331,4.8056605709282,4.50031642751824,1.71007646244749,4.77400025277816,2.37463399894024,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,1.68152568894461,0,0.393419540227666,0,0.205601498999509,0.501559486172034,0.651844533267181,0.946895611469467,0,1.22551502573691,0.883817722424512,1.32920336750173,0.270803863765016,0.640456598628376,0.260118695119756,0.822189523018381,0.829050053357545,1.15921234294021,0.14828656316206,0.267540828089713,0,2.37949619664889,0.766440987203842,0.68725489096526,0.506039384039006,0.318565414324097,0,0,1.20460095262218,0.76791966692651,0,1.4206635122641,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0.255725123687061,2.89151321907653,3.00802746381534,0.289693037921647,1.5905718941022,1.45990461090791,0.945348171640679,0.665188192387692,0.702678285545008,0.72038491523742,0,0,0.649094787309367,1.0447784237956,0.930705723632056,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,1.03366703667732,0.71153252537342,1.33888245105868,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0,1.07159673940896,0.44905874525234,0.563057402416611,1.53316637465883,0.949265659568129,0,1.31780417436063,0,0,0.496971951695318,0.379891534993739,1.05927344650575,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0.908144565869588,0.576175924479999,0,0.312160076830321,0.570471821544449,0,0.23486899728753,0.161872944368132,0.561803226808994,0.816616685019573,0.245668634623536,1.54988671763648,0,0,0,0,0,0.375355559615893,0.831192346452549,0.438977620880838,0.30648779579902,0.751190294532984,0.226864366320042,1.79389635688862,1.92201649936711,0.635795703478686,1.50045548042201,0.412210116953756,2.06112432036503,0.930584281657949,1.68776332241266,1.16924406193438,1.51460264546469,0.552299391853796,1.13152239773168,1.77504796258307,0.806016785821122,1.01736355386293,0.966304265816484,0.272746120590835,0.286804595389004,0.121973706129595,0.397589304964456,0,0.10366105501537,0,0,1.56449532329816,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0.811512834825538,0.70445216541493,0.288732895522148,0,0.570762456703795,0,0,6.15542515218493,1.8720341211139,2.22946743433092,0.93733833986777,1.34385702559088,0.567100388969546,0.447792613514241,1.16253575405585,0.766765358330422,0.492663237895943,0.352193736052904,0.829312462163088,0.576479813667846,0.37872730027914,0.825472625798197,0.381988425558278,0,1.71072446022705,0.514137463516618,0,2.00078502841405,0.448524337381443,1.74384027533312,0.36669142910475,0.387815147273333,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,1.20575750823834,0,0.499864955910285,2.43247561282381,1.50677127429638,2.10833939483032,0.479249710983165,1.14861935834114,0,0.868687840005475,0.61642896765115,1.43248770591916,3.81089489577993,2.75843064282698,1.07813787429759,1.79680250791648,0,0,0,0,0,7.49007023947182,8.97484377612075,9.11714129559278,1.59498939234882,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0,0,1.73767228936166,0.391602314925481,0.686286847621712,0.82707210449155,0.647142602455851,1.17400313583789,0,0,0.30239029332968,0.496215615637554,0.767309866440312,0.561320188866147,0.640695746278505,0.511707249066704,0.482561763430822,0,0.154209693802656,0.355123450626254,0.574890092096664,0,0.464841513839837,0.241718899183244,0.200506470303285,0,0.229628896329213,0,0.655622074797121,0,0.616122696835318,0,1.46139224653261,0.316654886678627,0,0,0,1.54227252690289,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0.2192598766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| |phase1_expression=0.908391896352783,1.07050261945492,0.704772020479856,0,0.893922188854576,0.872338524100369,2.53299878168311,0,0.783556884599516,0,0,0,0,0.618831764800233,2.65117900582333,0,1.20538905604795,0,0,0.61560529038394,0.408001382488506,0,0,0,0.125542639594803,0.61130724598361,0.821005894499457,0.314843125254717,1.18009283054671,0.383829398097213,1.23852898652861,0,0.30120591877825,0,0.232401601740905,0.142169232487422,0.587200878669695,2.21598163412751,2.00544447470142,2.60413044859022,5.37397138175818,2.91504299417082,3.60605794687861,5.52513307362346,6.42389104270976,4.60909716256851,2.78914844286822,2.05583944010913,0.929119112685311,3.16461631554365,1.7931249457037,2.83778675866302,1.37898272294647,0.645484683583826,4.06279459783025,3.57660445130949,2.72906150057846,3.37085226667627,1.22433556948361,0.962787081228281,0.639337125799041,3.29851300186716,5.38551875578406,7.6720455095885,1.45104619314292,3.40431134814684,2.4912889959823,2.51248665256743,2.60741459210101,4.77815458351257,2.42159801053347,1.10483290796269,3.16462387440884,3.38008458099107,2.76385589954557,3.98351426465914,4.38081661471331,4.8056605709282,4.50031642751824,1.71007646244749,4.77400025277816,2.37463399894024,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,1.68152568894461,0,0.393419540227666,0,0.205601498999509,0.501559486172034,0.651844533267181,0.946895611469467,0,1.22551502573691,0.883817722424512,1.32920336750173,0.270803863765016,0.640456598628376,0.260118695119756,0.822189523018381,0.829050053357545,1.15921234294021,0.14828656316206,0.267540828089713,0,2.37949619664889,0.766440987203842,0.68725489096526,0.506039384039006,0.318565414324097,0,0,1.20460095262218,0.76791966692651,0,1.4206635122641,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0.255725123687061,2.89151321907653,3.00802746381534,0.289693037921647,1.5905718941022,1.45990461090791,0.945348171640679,0.665188192387692,0.702678285545008,0.72038491523742,0,0,0.649094787309367,1.0447784237956,0.930705723632056,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,1.03366703667732,0.71153252537342,1.33888245105868,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0,1.07159673940896,0.44905874525234,0.563057402416611,1.53316637465883,0.949265659568129,0,1.31780417436063,0,0,0.496971951695318,0.379891534993739,1.05927344650575,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0.908144565869588,0.576175924479999,0,0.312160076830321,0.570471821544449,0,0.23486899728753,0.161872944368132,0.561803226808994,0.816616685019573,0.245668634623536,1.54988671763648,0,0,0,0,0,0.375355559615893,0.831192346452549,0.438977620880838,0.30648779579902,0.751190294532984,0.226864366320042,1.79389635688862,1.92201649936711,0.635795703478686,1.50045548042201,0.412210116953756,2.06112432036503,0.930584281657949,1.68776332241266,1.16924406193438,1.51460264546469,0.552299391853796,1.13152239773168,1.77504796258307,0.806016785821122,1.01736355386293,0.966304265816484,0.272746120590835,0.286804595389004,0.121973706129595,0.397589304964456,0,0.10366105501537,0,0,1.56449532329816,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0.811512834825538,0.70445216541493,0.288732895522148,0,0.570762456703795,0,0,6.15542515218493,1.8720341211139,2.22946743433092,0.93733833986777,1.34385702559088,0.567100388969546,0.447792613514241,1.16253575405585,0.766765358330422,0.492663237895943,0.352193736052904,0.829312462163088,0.576479813667846,0.37872730027914,0.825472625798197,0.381988425558278,0,1.71072446022705,0.514137463516618,0,2.00078502841405,0.448524337381443,1.74384027533312,0.36669142910475,0.387815147273333,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,1.20575750823834,0,0.499864955910285,2.43247561282381,1.50677127429638,2.10833939483032,0.479249710983165,1.14861935834114,0,0.868687840005475,0.61642896765115,1.43248770591916,3.81089489577993,2.75843064282698,1.07813787429759,1.79680250791648,0,0,0,0,0,7.49007023947182,8.97484377612075,9.11714129559278,1.59498939234882,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0.585707074963566,0.300946099727719,0,0,0,0,1.73767228936166,0.391602314925481,0.686286847621712,0.82707210449155,0.647142602455851,1.17400313583789,0,0,0.30239029332968,0.496215615637554,0.767309866440312,0.561320188866147,0.640695746278505,0.511707249066704,0.482561763430822,0,0.154209693802656,0.355123450626254,0.574890092096664,0,0.464841513839837,0.241718899183244,0.200506470303285,0,0.229628896329213,0,0.655622074797121,0,0.616122696835318,0,1.46139224653261,0.316654886678627,0,0,0,1.54227252690289,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0.2192598766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| ||
|short_description=p5@RCBTB2 | |||
}} | }} |
Latest revision as of 15:54, 17 September 2015
Short description: | p5@RCBTB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RCBTB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000544904_5end |
EntrezGene: | RCBTB2 |
HGNC: | 1914 |
UniProt: | B4DPP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.81e-45 | 48 |
phagocyte | 2.81e-45 | 48 |
macrophage dendritic cell progenitor | 5.42e-43 | 61 |
monopoietic cell | 1.28e-40 | 59 |
monocyte | 1.28e-40 | 59 |
monoblast | 1.28e-40 | 59 |
promonocyte | 1.28e-40 | 59 |
myeloid leukocyte | 2.06e-40 | 72 |
classical monocyte | 7.74e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.74e-39 | 42 |
granulocyte monocyte progenitor cell | 1.55e-37 | 67 |
myeloid lineage restricted progenitor cell | 1.70e-34 | 66 |
myeloid cell | 5.37e-30 | 108 |
common myeloid progenitor | 5.37e-30 | 108 |
leukocyte | 1.21e-24 | 136 |
nongranular leukocyte | 3.55e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 7.99e-23 | 120 |
hematopoietic oligopotent progenitor cell | 9.45e-22 | 161 |
hematopoietic multipotent progenitor cell | 9.45e-22 | 161 |
hematopoietic stem cell | 1.17e-20 | 168 |
hematopoietic cell | 3.64e-19 | 177 |
intermediate monocyte | 1.83e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.83e-11 | 9 |
connective tissue cell | 2.33e-08 | 361 |
mesenchymal cell | 4.02e-08 | 354 |
macrophage | 9.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.90e-34 | 98 |
blood island | 4.90e-34 | 98 |
hemolymphoid system | 1.47e-33 | 108 |
bone marrow | 5.35e-31 | 76 |
immune system | 5.74e-28 | 93 |
bone element | 1.85e-27 | 82 |
skeletal element | 3.24e-27 | 90 |
skeletal system | 1.04e-22 | 100 |
lateral plate mesoderm | 2.02e-14 | 203 |
musculoskeletal system | 7.03e-13 | 167 |
connective tissue | 3.07e-08 | 371 |
mesoderm | 6.24e-07 | 315 |
mesoderm-derived structure | 6.24e-07 | 315 |
presumptive mesoderm | 6.24e-07 | 315 |