FFCP PHASE1:Hg19::chr14:100841699..100841706,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:100841699..100841706,- to FFCP PHASE1:Hg19::chr14:100841699..100841706,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7453 | |EntrezGene=7453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12729 | |HGNC=12729 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2Y7 | |UniProt=G3V2Y7 | ||
|association_with_transcript=-7bp_to_ENST00000555410_5end | |||
|cluster_id=chr14:100841699..100841706,- | |||
|description=CAGE_peak_5_at_WARS_5end | |||
|id=chr14:100841699..100841706,- | |||
|ontology_enrichment_celltype=CL:0002057!2.24e-25!42;CL:0000860!7.59e-23!45;CL:0000766!9.82e-16!76;CL:0002194!3.84e-15!63;CL:0000576!3.84e-15!63;CL:0000040!3.84e-15!63;CL:0000559!3.84e-15!63;CL:0002009!4.57e-14!65;CL:0000839!3.81e-13!70;CL:0000557!1.54e-12!71;CL:0000763!1.82e-10!112;CL:0000049!1.82e-10!112;CL:0000738!9.86e-08!140;CL:0002087!1.39e-07!119;CL:0000988!3.41e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-23;33!CL:0002057;1.16e-23;33!CL:0000473;7.46e-18;39!CL:0000234;7.46e-18;39!CL:0000576;3.11e-16;48!CL:0000766;1.85e-11;69!CL:0002139;6.39e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.66e-32,42;CL:0002057,1.66e-32,42;CL:0000473,8.03e-30,48;CL:0000234,8.03e-30,48;CL:0000766,7.16e-23,72;CL:0002194,7.37e-23,59;CL:0000576,7.37e-23,59;CL:0000040,7.37e-23,59;CL:0000559,7.37e-23,59;CL:0002009,2.01e-21,61;CL:0000839,3.40e-19,66;CL:0000557,1.33e-18,67;CL:0000763,3.42e-14,108;CL:0000049,3.42e-14,108;CL:0002087,2.90e-12,115;CL:0000738,1.21e-11,136;CL:0000988,6.26e-10,177;CL:0002031,7.41e-10,120;CL:0002032,5.08e-09,161;CL:0000837,5.08e-09,161;CL:0000037,7.04e-09,168;CL:0002393,1.14e-07,9;CL:0002397,1.14e-07,9;CL:0002139,6.62e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.30e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.09e-16!112;UBERON:0002390!4.99e-13!102;UBERON:0003061!4.99e-13!102;UBERON:0002405!1.13e-11!115;UBERON:0003081!1.78e-11!216;UBERON:0002371!8.52e-11!80;UBERON:0001474!2.09e-10!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002465;5.09e-07;10!UBERON:0001473;9.65e-07;8!UBERON:0004536;9.65e-07;8!UBERON:0006558;9.65e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.54e-23,108;UBERON:0002405,5.46e-22,93;UBERON:0002390,2.43e-18,98;UBERON:0003061,2.43e-18,98;UBERON:0003081,1.35e-17,203;UBERON:0002371,3.81e-16,76;UBERON:0001474,2.56e-15,82;UBERON:0000926,3.96e-13,315;UBERON:0004120,3.96e-13,315;UBERON:0006603,3.96e-13,315;UBERON:0004765,1.21e-12,90;UBERON:0001434,2.65e-11,100;UBERON:0002465,4.67e-07,10;UBERON:0001473,8.96e-07,8;UBERON:0004536,8.96e-07,8;UBERON:0006558,8.96e-07,8 | |||
|phase1_expression=0.363356758541113,0,1.55049844505568,1.0007329835313,0,0.872338524100369,0,3.79031924056099,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,3.44800193625897,1.43117993565528,1.23186982565596,0.376627918784408,6.03665905408815,5.41863890369642,7.87107813136792,3.93364276848904,4.22212337906934,4.18003532953405,0,0,0.369754010166788,0.309868802321207,0.853015394924529,0,4.43196326825502,5.41470008169383,6.94434786290726,0,0.647787332037959,0,8.86929256555345,6.42389104270976,11.6440349370152,11.6214518452842,5.75635043230556,16.1047312865454,47.4692447331548,36.8871417401905,53.9179484145974,9.99762474136194,12.2642089880927,18.9597081232078,9.03563229804502,10.3704337021981,15.0564734578207,11.3251040177234,16.3673803808808,29.4095077867559,36.2836430205388,36.1029220295154,51.9994195649887,20.895065181258,14.1846306172785,24.2900677108274,25.8786125214446,34.4178726157333,44.740902009254,21.1889825921679,22.0966581592539,24.684066220389,14.365359469212,15.5201138974482,8.80566311135179,2.80821577866238,3.60424542819615,1.76798145366788,11.4005097496499,16.9079175619227,11.6905058409366,1.75996244461323,0,0.889509253863555,0,2.00197993518006,0.574752439954483,0,0,0,0.587237189370939,0,0,2.24203425192614,0,0,0,0.205601498999509,1.17030546773475,0,0,0,0.891283655081389,0,0,0,1.66518715643378,3.38154303655683,0.986627427622057,0,0.289803085735052,0,0,0,0.679856056185397,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0,0,0,0,0.201606743224732,0,0,0,6.03630773733273,1.02290049474824,1.44575660953827,3.50936537445123,1.88300474649071,0,3.89307896242109,0.850813354476611,0.443458794925128,0.263504357079378,1.30979075497713,0,0,2.27183175558278,1.91542711029194,5.05240249971688,0.238490624305342,0.571994910780128,0,0.596287222100115,0,2.42998351125316,1.69592382577203,1.67799774483962,2.20094433552054,1.25396979922086,6.20200222006389,10.6729878806013,9.0374565446461,10.876391561947,5.32190474002959,15.1318475679865,2.20597848207521,2.43042584364528,2.58969212023831,1.57170560838319,1.46394924628319,0,0,1.09921046358244,1.31780417436063,0,0,3.47880366186723,2.5326102332916,2.51577443545116,3.44203944898576,2.12801029319014,0,0,3.45334567784024,1.24484414159907,0.538842688278752,0.490385709340376,0.756787138224657,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0.309977343527296,1.18800285728205,3.70900393917835,2.73048408581408,7.18618141816238,0,0,0,0,0,1.50238058906597,0.453728732640084,0,0.640672166455702,0.635795703478686,0.600182192168805,0.721367704669072,4.12224864073007,2.97786970130544,1.0126579934476,1.46155507741798,0.252433774244115,1.01254888506529,5.4959659318396,0,0.403008392910561,0,0.193260853163297,0,0,0,0.132529768321485,0.116193942869518,0.829288440122964,0.504641701751257,0,4.69348596989448,0,1.38134921352481,0.464367928031979,1.44375896333917,0.354920400119532,0.842923450390509,0,1.10293972732394,0.653638332277218,0.949082476444386,0.674156540800822,0.98110732562673,0,5.16708818237254,1.40241773803446,0,0,0,0.982827216677626,1.18157981336281,0,0,0.857839051492628,0.109750285408626,0,0.100528972411631,0,0.651616610620649,0,0,1.73895607462615,1.87853910777315,18.9120046567007,12.9635943521451,12.1762657430143,0,0,0.492434012174795,4.21207677250628,1.78357394746474,0,0,0,0,0.581267877027924,0.383382679165211,2.46331618947972,0.792435906119034,0.207328115540772,0.144119953416961,0.12624243342638,13.4615535899398,24.829247661288,25.7878383862103,11.9750712215894,4.73006466435288,18.320926528479,35.4424776461917,0.112131084345361,1.30788020649984,0.1466765716419,0.646358578788889,0,0,7.97814349754611,2.08014873822732,0.257207374262142,0,0,1.71573592389777,0,0,0,0.355391948742546,0,2.1100756394171,0.871533458600294,0.299918973546171,0,0,2.10833939483032,1.19812427745791,3.44585807502342,0,0,0.205476322550383,0,6.05259777565047,0.394061520403854,0.431255149719035,0.256686072559497,0.254094624222463,1.30139853857622,0,0.502548796003046,0,4.49404214368309,2.99161459204025,6.21623270154053,0.24538298343828,0,1.08506009479894,6.65506756898583,0.892144943985809,2.05013139544115,1.40569697991256,0.601892199455438,0,3.10419213877515,0,0.368738337083406,0.695068915744663,0.391602314925481,0.686286847621712,1.03384013061444,7.11856862701436,2.34800627167578,0,0,0,2.23297027036899,1.38115775959256,0.841980283299221,5.50998341799514,1.02341449813341,0.804269605718038,0,0,0.355123450626254,0.492762936082855,2.07701771673448,0,0.120859449591622,0,0.184161977871793,9.64441364582697,2.73136752010076,9.17870904715969,0.451199612907412,0.308061348417659,0,0,0.105551628892876,10.2360045663807,4.76262374774244,3.23873874153209,20.0495428497376,0.541892875087706,1.00337954770971,0.764628819135115,0.831076008928724,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0.325378394664303,1.33953315142039,0,0.247528499761764,0,0,3.21367859688319,2.90012154876366,0.154048617114644,0,0,0.2148404897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| ||
|short_description=p5@WARS | |||
}} | }} |
Latest revision as of 10:18, 18 September 2015
Short description: | p5@WARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WARS_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000555410_5end |
EntrezGene: | WARS |
HGNC: | 12729 |
UniProt: | G3V2Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.66e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-32 | 42 |
defensive cell | 8.03e-30 | 48 |
phagocyte | 8.03e-30 | 48 |
myeloid leukocyte | 7.16e-23 | 72 |
monopoietic cell | 7.37e-23 | 59 |
monocyte | 7.37e-23 | 59 |
monoblast | 7.37e-23 | 59 |
promonocyte | 7.37e-23 | 59 |
macrophage dendritic cell progenitor | 2.01e-21 | 61 |
myeloid lineage restricted progenitor cell | 3.40e-19 | 66 |
granulocyte monocyte progenitor cell | 1.33e-18 | 67 |
myeloid cell | 3.42e-14 | 108 |
common myeloid progenitor | 3.42e-14 | 108 |
nongranular leukocyte | 2.90e-12 | 115 |
leukocyte | 1.21e-11 | 136 |
hematopoietic cell | 6.26e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 7.41e-10 | 120 |
hematopoietic oligopotent progenitor cell | 5.08e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-09 | 161 |
hematopoietic stem cell | 7.04e-09 | 168 |
intermediate monocyte | 1.14e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.14e-07 | 9 |
endothelial cell of vascular tree | 6.62e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.54e-23 | 108 |
immune system | 5.46e-22 | 93 |
hematopoietic system | 2.43e-18 | 98 |
blood island | 2.43e-18 | 98 |
lateral plate mesoderm | 1.35e-17 | 203 |
bone marrow | 3.81e-16 | 76 |
bone element | 2.56e-15 | 82 |
mesoderm | 3.96e-13 | 315 |
mesoderm-derived structure | 3.96e-13 | 315 |
presumptive mesoderm | 3.96e-13 | 315 |
skeletal element | 1.21e-12 | 90 |
skeletal system | 2.65e-11 | 100 |
lymphoid system | 4.67e-07 | 10 |
lymphatic vessel | 8.96e-07 | 8 |
lymph vasculature | 8.96e-07 | 8 |
lymphatic part of lymphoid system | 8.96e-07 | 8 |