FFCP PHASE1:Hg19::chr14:32887572..32887584,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr14:32887572..32887584,+ to FFCP PHASE1:Hg19::chr14:32887572..32887584,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:32887572..32887584,+ | |||
|coexpression_cluster_id=C3422 | |||
|description=CAGE_peak_at_chr14:32887572..32887584,+ | |||
|id=chr14:32887572..32887584,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.27e-09!10;CL:0000541!2.27e-09!10;CL:0000333!4.53e-08!41;CL:0002589!4.64e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.01e-24;3!CL:0000148;4.18e-08;10!CL:0000322;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,7.02e-25,3;CL:0000148,3.76e-08,10;CL:0000541,3.76e-08,10;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.71e-19;1 | |||
|ontology_enrichment_disease=DOID:114!6.08e-09!2;DOID:1909!1.29e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;8.19e-37;2!DOID:178;3.56e-19;1!DOID:326;3.56e-19;1!DOID:3978;3.56e-19;1!DOID:3394;3.56e-19;1!DOID:5844;3.56e-19;1!DOID:1287;5.64e-19;4!DOID:1909;1.43e-10;2!DOID:3910;2.85e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.83e-37,2;DOID:178,2.71e-19,1;DOID:326,2.71e-19,1;DOID:3978,2.71e-19,1;DOID:3394,2.71e-19,1;DOID:5844,2.71e-19,1;DOID:1287,5.15e-19,4;DOID:1909,1.43e-10,2;DOID:3910,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.59e-17!27;UBERON:0003978!4.42e-12!3;UBERON:0009751!4.42e-12!3;UBERON:0000946!4.42e-12!3;UBERON:0002523!4.42e-12!3;UBERON:0005983!4.42e-12!3;UBERON:0002165!4.42e-12!3;UBERON:0002062!4.42e-12!3;UBERON:0007280!4.42e-12!3;UBERON:0003103!3.78e-11!69;UBERON:0000948!5.90e-11!24;UBERON:0005498!5.90e-11!24;UBERON:0004140!5.90e-11!24;UBERON:0009881!5.90e-11!24;UBERON:0004141!5.90e-11!24;UBERON:0003084!5.90e-11!24;UBERON:0007005!5.90e-11!24;UBERON:0004139!5.90e-11!24;UBERON:0004291!5.90e-11!24;UBERON:0002133!2.09e-08!2;UBERON:0001529!4.64e-08!2;UBERON:0007204!4.64e-08!2;UBERON:0003127!7.62e-08!2;UBERON:0001009!3.25e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;1.30e-19;1!UBERON:0005623;1.30e-19;1!UBERON:0002084;1.71e-19;1!UBERON:0002082;1.71e-19;1!UBERON:0007100;3.81e-18;25!UBERON:0004903;2.85e-10;2!UBERON:0002173;2.85e-10;2!UBERON:0002186;2.85e-10;2!UBERON:0003978;2.05e-07;3!UBERON:0000946;2.05e-07;3!UBERON:0004151;2.25e-07;3!UBERON:0004821;2.88e-07;3!UBERON:0007499;2.88e-07;3!UBERON:0003215;2.88e-07;3!UBERON:0010368;2.88e-07;3!UBERON:0009911;2.88e-07;3!UBERON:0002299;2.88e-07;3!UBERON:0006524;2.88e-07;3!UBERON:0008874;2.88e-07;3!UBERON:0002169;2.88e-07;3!UBERON:0004894;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,1.30e-19,1;UBERON:0005623,1.30e-19,1;UBERON:0002084,1.56e-19,1;UBERON:0002082,1.56e-19,1;UBERON:0010226,1.56e-19,1;UBERON:0007100,7.90e-17,27;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0003978,2.05e-07,3;UBERON:0009751,2.05e-07,3;UBERON:0000946,2.05e-07,3;UBERON:0002523,2.05e-07,3;UBERON:0005983,2.05e-07,3;UBERON:0002165,2.05e-07,3;UBERON:0002062,2.05e-07,3;UBERON:0007280,2.05e-07,3;UBERON:0004151,2.19e-07,3;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
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| ||
|short_description=p@chr14:32887572..32887584,+ | |||
}} | }} |
Latest revision as of 20:10, 24 July 2015
Short description: | p@chr14:32887572..32887584, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:32887572..32887584, + |
Coexpression cluster: | C3422_melanoma_astrocytoma_heart_left_hepatoma_bronchioalveolar_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 7.02e-25 | 3 |
melanocyte | 3.76e-08 | 10 |
melanoblast | 3.76e-08 | 10 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 1.30e-19 | 1 |
semi-lunar valve | 1.30e-19 | 1 |
heart left ventricle | 1.56e-19 | 1 |
cardiac ventricle | 1.56e-19 | 1 |
future cardiac ventricle | 1.56e-19 | 1 |
primary circulatory organ | 7.90e-17 | 27 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
valve | 2.05e-07 | 3 |
cardiac mesenchyme | 2.05e-07 | 3 |
cardial valve | 2.05e-07 | 3 |
tunica intima | 2.05e-07 | 3 |
heart layer | 2.05e-07 | 3 |
endocardium | 2.05e-07 | 3 |
endocardial cushion | 2.05e-07 | 3 |
presumptive endocardium | 2.05e-07 | 3 |
cardiac chamber | 2.19e-07 | 3 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.83e-37 | 2 |
vascular disease | 2.71e-19 | 1 |
ischemia | 2.71e-19 | 1 |
extrinsic cardiomyopathy | 2.71e-19 | 1 |
myocardial ischemia | 2.71e-19 | 1 |
myocardial infarction | 2.71e-19 | 1 |
cardiovascular system disease | 5.15e-19 | 4 |
melanoma | 1.43e-10 | 2 |
lung adenocarcinoma | 3.58e-10 | 2 |