FFCP PHASE1:Hg19::chr15:102347644..102347653,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:102347644..102347653,+ to FFCP PHASE1:Hg19::chr15:102347644..102347653,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:102347644..102347653,+ | |||
|description=CAGE_peak_at_chr15:102347644..102347653,+ | |||
|id=chr15:102347644..102347653,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.84e-13!180;CL:0000057!2.47e-09!75;CL:0002620!1.70e-07!23;CL:1000507!2.44e-07!12;CL:1000494!2.44e-07!12;CL:1000497!8.68e-07!18;CL:0002518!8.68e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.19e-12;10!CL:1000494;1.19e-12;10!CL:1000497;4.45e-12;17!CL:0002518;4.45e-12;17!CL:0000239;1.65e-08;3!CL:1000615;1.65e-08;3!CL:0002567;1.65e-08;3!CL:0002306;1.65e-08;3!CL:0000075;3.37e-08;27!CL:1000449;4.30e-08;15!CL:0002556;6.31e-08;6!CL:0000243;3.88e-07;15!CL:0000125;3.88e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.71e-12,10;CL:1000494,1.71e-12,10;CL:1000497,5.83e-12,17;CL:0002518,5.83e-12,17;CL:0000333,1.44e-09,41;CL:0002567,9.82e-09,3;CL:0000239,1.84e-08,3;CL:1000615,1.84e-08,3;CL:0002306,1.84e-08,3;CL:0000075,2.76e-08,27;CL:1000449,5.39e-08,15;CL:0002556,5.71e-08,6;CL:0000243,3.42e-07,15;CL:0000125,3.42e-07,15;CL:0000030,3.42e-07,15;CL:0000339,3.42e-07,15;CL:0000148,8.93e-07,10;CL:0000541,8.93e-07,10;CL:0000057,9.98e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000339;3.88e-07;15 | |||
|ontology_enrichment_disease=DOID:14566!5.04e-09!239;DOID:162!3.68e-08!235;DOID:120!6.26e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:1115;1.23e-10;20!DOID:201;2.80e-08;6!DOID:0060100;2.80e-08;6!DOID:3093;4.25e-08;11!DOID:1909;2.08e-07;2!DOID:4231;9.34e-07;2!DOID:1907;9.34e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,1.22e-10,20;DOID:201,2.97e-08,6;DOID:0060100,2.97e-08,6;DOID:3093,3.40e-08,11;DOID:1909,2.09e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!2.44e-07!12;UBERON:0001231!2.44e-07!12;UBERON:0004810!2.44e-07!12;UBERON:0003102!5.59e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.19e-12;10!UBERON:0009773;1.19e-12;10!UBERON:0001231;1.19e-12;10!UBERON:0004810;1.19e-12;10!UBERON:0002113;6.10e-12;24!UBERON:0011143;6.10e-12;24!UBERON:0000489;1.77e-09;29!UBERON:0006554;4.38e-09;30!UBERON:0001008;4.38e-09;30!UBERON:0006853;1.65e-08;3!UBERON:0007685;1.65e-08;3!UBERON:0004134;1.65e-08;3!UBERON:0006555;4.30e-08;15!UBERON:0004819;4.30e-08;15!UBERON:0001285;4.30e-08;15!UBERON:0007684;4.30e-08;15!UBERON:0001758;6.31e-08;6!UBERON:0003672;6.31e-08;6!UBERON:0003129;8.65e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.71e-12,10;UBERON:0002113,9.37e-11,26;UBERON:0003918,9.37e-11,26;UBERON:0011143,9.37e-11,26;UBERON:0005095,9.37e-11,26;UBERON:0007687,9.37e-11,26;UBERON:0000489,1.20e-08,31;UBERON:0006853,1.84e-08,3;UBERON:0007685,1.84e-08,3;UBERON:0004134,1.84e-08,3;UBERON:0004211,5.39e-08,15;UBERON:0009773,5.39e-08,15;UBERON:0001231,5.39e-08,15;UBERON:0001285,5.39e-08,15;UBERON:0007684,5.39e-08,15;UBERON:0004208,5.39e-08,15;UBERON:0001758,5.71e-08,6;UBERON:0003672,5.71e-08,6;UBERON:0006555,1.96e-07,16;UBERON:0004819,1.96e-07,16;UBERON:0003129,7.95e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.866364470720326,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.542270404062111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1185468930115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0.280901613404497,1.02077085627447,4.42203542322365,0.619954687054593,3.56400857184616,0.741800787835671,0,0,2.69337782326506,1.62654075833553,3.3247693858102,5.70670907145089,0.919463387397059,0,0,0.538168907066586,0,0,2.70081986475962,2.16410311400722,1.03056216018252,0.18611685633159,0.506328996723799,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,1.90994212779139,1.17217447210047,1.71072446022705,0.308482478109971,3.60411669412701,2.28661146104463,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,3.99664626553181,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.328508624055237,1.03850885836724,0.116210378459959,0,0.200506470303285,0,0.114814448164607,0.910455840033585,0.262248829918848,0.451199612907412,0.693138033939733,0,4.38417673959782,2.21658420675039,0,0,0,0,1.08378575017541,2.00675909541941,1.01950509218015,1.66215201785745,1.34324852833307,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,3.46293581513704,1.3940745403212,0,0,0,0,0.286249773483982,0,0.949138274156178,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,1.65409603063837,0.66343897524122,0.438450885253763,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3766064000164,0.16480387422676,0,0,0,0,3.27259784006895,0.369254416383208,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90794580678476,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,1.35291077473043,0,0,0,0,0,0.853828638089378,1.38674673013139,0,0,1.30588809870604,0,0,0,0,0,0,0,0,23.1600852653009,4.17300684576278,0,0,3.36667045056442,0,0,0,0,0,0,1.49103042678519,0,3.94122197613481,5.23014231561666,0.611989305817931,1.73370353940911,0,0,0,0,2.89176089707246,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,1.36381929150995,0.211200673038813,0,0,0,0,0,0.542999601753713,0,0,10.7757172406239,0,15.1645339389025,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37478448758317,7.58245587708239,11.4186133417987,0,0,0,0,0.233713309847224,0.554805861502613,0,0.50313580350515,0,0.228840068396924,0,0.310874401165561,0,0.318593534327405,0.449803112163605,0.465788870628778,0,0.265841714557995,0,0,0.380805212168795,1.62748293281865,0.181848659202559,0.214821114084977,0.464033759878494,0,1.20008329398946,0,0.336749488765919,1.26184898228651,0,0,0,0.226705925512272,3.24131464053368,0,0.71635536432595,0,0,3.35709377297174,0,0,19.218113894096,0,0.303859956177382,0,0,0,0.163565394255844,0.327609848846413,6.14432271884298,0,0,0,0,6.2426754892352,1.28874165176289,0,0,0,0,0.157265941855896,0,0.509197589862076,0.212574920101683,0.247871528518004,3.91051442581271,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0.381382095467167,20.710797781803,0,0,20.573917007759,0,0,0.327543835020193,0,0,0,0,0,0,0,0,10.0246609284984,0,0,0,0,0,0,1.15233987555779,0.342976018874837,0,0,0,0.111231401892069,0,0,0,0,55.4933909431857,27.7095978974489,0.142953088353313,0,0,0,0,0,0,0,0,1.41998400876678,1.19298766662821,0,0.22910686854405,2.79185747097888,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0.199882311849858,0,5.64631794745107,0.240724100067505,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.732629417498771,0,3.8614456457388,0,0,0,0,0,0,0.320568492303233 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| ||
|short_description=p@chr15:102347644..102347653,+ | |||
}} | }} |
Latest revision as of 00:21, 25 July 2015
Short description: | p@chr15:102347644..102347653, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:102347644..102347653, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.71e-12 | 10 |
nephron tubule epithelial cell | 1.71e-12 | 10 |
kidney cell | 5.83e-12 | 17 |
kidney epithelial cell | 5.83e-12 | 17 |
migratory neural crest cell | 1.44e-09 | 41 |
light melanocyte | 9.82e-09 | 3 |
brush border epithelial cell | 1.84e-08 | 3 |
kidney cortex tubule cell | 1.84e-08 | 3 |
epithelial cell of proximal tubule | 1.84e-08 | 3 |
columnar/cuboidal epithelial cell | 2.76e-08 | 27 |
epithelial cell of nephron | 5.39e-08 | 15 |
fibroblast of periodontium | 5.71e-08 | 6 |
glial cell (sensu Vertebrata) | 3.42e-07 | 15 |
glial cell | 3.42e-07 | 15 |
glioblast | 3.42e-07 | 15 |
glioblast (sensu Vertebrata) | 3.42e-07 | 15 |
melanocyte | 8.93e-07 | 10 |
melanoblast | 8.93e-07 | 10 |
fibroblast | 9.98e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.71e-12 | 10 |
kidney | 9.37e-11 | 26 |
kidney mesenchyme | 9.37e-11 | 26 |
upper urinary tract | 9.37e-11 | 26 |
kidney rudiment | 9.37e-11 | 26 |
kidney field | 9.37e-11 | 26 |
cavitated compound organ | 1.20e-08 | 31 |
renal cortex tubule | 1.84e-08 | 3 |
region of nephron tubule | 1.84e-08 | 3 |
proximal tubule | 1.84e-08 | 3 |
nephron epithelium | 5.39e-08 | 15 |
renal tubule | 5.39e-08 | 15 |
nephron tubule | 5.39e-08 | 15 |
nephron | 5.39e-08 | 15 |
uriniferous tubule | 5.39e-08 | 15 |
nephrogenic mesenchyme | 5.39e-08 | 15 |
periodontium | 5.71e-08 | 6 |
dentition | 5.71e-08 | 6 |
excretory tube | 1.96e-07 | 16 |
kidney epithelium | 1.96e-07 | 16 |
skull | 7.95e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 1.22e-10 | 20 |
connective tissue cancer | 2.97e-08 | 6 |
musculoskeletal system cancer | 2.97e-08 | 6 |
nervous system cancer | 3.40e-08 | 11 |
melanoma | 2.09e-07 | 2 |