FFCP PHASE1:Hg19::chr17:38975907..38975928,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:38975907..38975928,- to FFCP PHASE1:Hg19::chr17:38975907..38975928,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3858 | |EntrezGene=3858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6413 | |HGNC=6413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_uc010cxd.2_5end | |||
|cluster_id=chr17:38975907..38975928,- | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_3_at_KRT10_5end | |||
|id=chr17:38975907..38975928,- | |||
|ontology_enrichment_celltype=CL:0002139!6.50e-20!24;CL:0000115!2.50e-19!35;CL:0000071!6.92e-14!18;CL:0002546!6.92e-14!18;CL:0002078!1.73e-13!44;CL:1000413!2.95e-12!9;CL:0000213!4.43e-10!57;CL:0000215!4.43e-10!57;CL:0002544!7.16e-09!6;CL:0005020!9.55e-08!6;CL:0002138!9.55e-08!6;CL:0005022!9.55e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:1000413;5.69e-22;9!CL:0000115;2.17e-17;36!CL:0002139;1.52e-15;24!CL:0000071;1.95e-15;18!CL:0002544;1.28e-12;6!CL:0002623;7.29e-12;3!CL:0002078;7.44e-12;45!CL:0002591;3.12e-09;1!CL:0000213;2.36e-08;58!CL:0000215;2.36e-08;58!CL:0000622;1.85e-07;5!CL:0002188;3.13e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,3.44e-22,9;CL:0000115,1.56e-20,36;CL:0002078,4.08e-16,45;CL:0002139,1.20e-15,24;CL:0000071,1.36e-15,18;CL:0002546,1.36e-15,18;CL:0002544,9.53e-13,6;CL:0000213,3.76e-12,58;CL:0000215,3.76e-12,58;CL:0002623,1.10e-11,3;CL:0002591,5.28e-09,1;CL:0000222,2.19e-07,121;CL:0000622,2.36e-07,5;CL:0002188,3.34e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.95e-15;18!UBERON:0004874;1.16e-09;1!UBERON:0008801;3.12e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-23!115;UBERON:0004111!2.72e-23!241;UBERON:0000477!7.00e-22!286;UBERON:0000025!1.08e-17!194;UBERON:0001049!6.71e-15!57;UBERON:0005068!6.71e-15!57;UBERON:0006241!6.71e-15!57;UBERON:0007135!6.71e-15!57;UBERON:0001986!6.92e-14!18;UBERON:0004638!6.92e-14!18;UBERON:0004852!6.92e-14!18;UBERON:0003075!1.66e-13!86;UBERON:0007284!1.66e-13!86;UBERON:0000055!1.21e-12!69;UBERON:0002346!2.44e-12!90;UBERON:0003915!2.95e-12!9;UBERON:0004700!2.95e-12!9;UBERON:0001917!2.95e-12!9;UBERON:0002616!4.23e-12!59;UBERON:0000119!6.03e-12!312;UBERON:0000483!6.57e-12!309;UBERON:0002049!1.74e-10!79;UBERON:0007798!1.74e-10!79;UBERON:0000487!1.89e-10!22;UBERON:0004872!2.24e-10!84;UBERON:0003080!3.11e-10!42;UBERON:0001981!1.12e-09!60;UBERON:0007500!1.12e-09!60;UBERON:0004537!1.12e-09!60;UBERON:0006965!1.12e-09!60;UBERON:0002020!1.26e-09!34;UBERON:0003528!1.26e-09!34;UBERON:0002780!1.97e-09!41;UBERON:0001890!1.97e-09!41;UBERON:0006240!1.97e-09!41;UBERON:0000955!2.24e-09!69;UBERON:0006238!2.24e-09!69;UBERON:0001017!3.26e-09!82;UBERON:0001869!4.23e-09!32;UBERON:0001893!4.38e-09!34;UBERON:0005743!5.31e-09!86;UBERON:0000467!7.87e-09!625;UBERON:0000480!9.45e-09!626;UBERON:0006914!1.26e-08!25;UBERON:0002791!1.51e-08!33;UBERON:0001009!2.38e-08!113;UBERON:0003914!2.51e-08!118;UBERON:0004535!2.51e-08!110;UBERON:0000468!1.62e-07!659;UBERON:0000073!3.15e-07!94;UBERON:0001016!3.15e-07!94;UBERON:0002619!4.44e-07!22;UBERON:0003103!4.77e-07!69;UBERON:0000153!7.26e-07!129;UBERON:0007811!7.26e-07!129;UBERON:0001950!7.59e-07!20;UBERON:0000033!7.99e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;5.69e-22;9!UBERON:0004700;5.69e-22;9!UBERON:0001917;5.69e-22;9!UBERON:0004638;1.95e-15;18!UBERON:0001986;1.95e-15;18!UBERON:0004852;1.95e-15;18!UBERON:0001044;1.07e-12;6!UBERON:0003293;1.07e-12;6!UBERON:0003294;1.07e-12;6!UBERON:0010047;1.07e-12;6!UBERON:0003408;1.07e-12;6!UBERON:0000167;1.07e-12;6!UBERON:0000487;1.50e-12;22!UBERON:0002106;4.85e-12;3!UBERON:0006914;5.48e-11;25!UBERON:0007029;1.16e-09;1!UBERON:0000989;1.16e-09;1!UBERON:0008811;1.16e-09;1!UBERON:0002426;1.16e-09;1!UBERON:0003831;1.16e-09;1!UBERON:0003898;1.16e-09;1!UBERON:0004830;1.16e-09;1!UBERON:0003830;1.16e-09;1!UBERON:0005175;1.16e-09;1!UBERON:0001774;1.16e-09;1!UBERON:0001103;1.16e-09;1!UBERON:0001000;3.12e-09;1!UBERON:0001831;3.12e-09;1!UBERON:0005352;3.12e-09;1!UBERON:0001567;3.12e-09;1!UBERON:0001637;9.11e-09;42!UBERON:0003509;9.11e-09;42!UBERON:0004572;9.11e-09;42!UBERON:0007500;2.00e-08;56!UBERON:0001981;2.00e-08;56!UBERON:0004537;2.00e-08;56!UBERON:0000490;2.72e-08;33!UBERON:0004177;1.45e-07;5!UBERON:0005057;1.45e-07;5!UBERON:0000055;9.35e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,3.44e-22,9;UBERON:0004700,3.44e-22,9;UBERON:0001917,3.44e-22,9;UBERON:0004638,1.36e-15,18;UBERON:0001986,1.36e-15,18;UBERON:0004852,1.36e-15,18;UBERON:0000487,1.12e-12,22;UBERON:0001044,1.16e-12,6;UBERON:0003293,1.16e-12,6;UBERON:0003294,1.16e-12,6;UBERON:0010047,1.16e-12,6;UBERON:0000167,1.16e-12,6;UBERON:0002106,6.04e-12,3;UBERON:0004854,6.04e-12,3;UBERON:0009034,6.04e-12,3;UBERON:0002095,6.04e-12,3;UBERON:0004782,6.04e-12,3;UBERON:0003281,6.04e-12,3;UBERON:0009664,6.04e-12,3;UBERON:0002296,6.04e-12,3;UBERON:0005602,6.04e-12,3;UBERON:0001179,6.04e-12,3;UBERON:0006293,6.04e-12,3;UBERON:0006914,4.25e-11,25;UBERON:0003887,6.28e-11,12;UBERON:0000055,3.93e-10,68;UBERON:0004872,8.20e-10,83;UBERON:0007029,8.68e-10,1;UBERON:0000989,9.44e-10,1;UBERON:0008811,9.44e-10,1;UBERON:0006258,9.44e-10,1;UBERON:0005876,9.44e-10,1;UBERON:0004874,9.44e-10,1;UBERON:0002426,1.12e-09,1;UBERON:0003831,1.12e-09,1;UBERON:0003898,1.12e-09,1;UBERON:0004830,1.12e-09,1;UBERON:0003830,1.12e-09,1;UBERON:0005175,1.12e-09,1;UBERON:0001774,1.12e-09,1;UBERON:0001103,1.12e-09,1;UBERON:0010084,1.12e-09,1;UBERON:0007500,1.35e-09,59;UBERON:0001981,1.35e-09,59;UBERON:0004537,1.35e-09,59;UBERON:0006965,1.35e-09,59;UBERON:0001831,1.99e-09,1;UBERON:0001567,1.99e-09,1;UBERON:0008801,1.99e-09,1;UBERON:0001000,4.50e-09,1;UBERON:0005352,4.50e-09,1;UBERON:0002049,1.25e-08,78;UBERON:0007798,1.25e-08,78;UBERON:0001637,1.53e-08,42;UBERON:0003509,1.53e-08,42;UBERON:0004572,1.53e-08,42;UBERON:0003408,8.54e-08,10;UBERON:0004111,1.94e-07,240;UBERON:0002553,2.15e-07,61;UBERON:0003498,3.34e-07,5;UBERON:0005985,3.34e-07,5;UBERON:0004876,4.15e-07,11;UBERON:0000058,8.72e-07,19 | |||
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| ||
|short_description=p3@KRT10 | |||
}} | }} |
Latest revision as of 03:42, 20 September 2015
Short description: | p3@KRT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KRT10_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | 57bp_to_uc010cxd.2_5end |
EntrezGene: | KRT10 |
HGNC: | 6413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 3.44e-22 | 9 |
endothelial cell | 1.56e-20 | 36 |
meso-epithelial cell | 4.08e-16 | 45 |
endothelial cell of vascular tree | 1.20e-15 | 24 |
blood vessel endothelial cell | 1.36e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.36e-15 | 18 |
aortic endothelial cell | 9.53e-13 | 6 |
lining cell | 3.76e-12 | 58 |
barrier cell | 3.76e-12 | 58 |
acinar cell of salivary gland | 1.10e-11 | 3 |
smooth muscle cell of the pulmonary artery | 5.28e-09 | 1 |
mesodermal cell | 2.19e-07 | 121 |
acinar cell | 2.36e-07 | 5 |
glomerular endothelial cell | 3.34e-07 | 5 |