FFCP PHASE1:Hg19::chr18:12059774..12059782,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:12059774..12059782,- | |||
|description=CAGE_peak_at_chr18:12059774..12059782,- | |||
|id=chr18:12059774..12059782,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;3.67e-23;1!CL:0000159;2.74e-12;2!CL:0002253;2.74e-12;2!CL:0002563;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.62e-23,1;CL:0000159,2.32e-12,2;CL:0002253,3.24e-12,2;CL:0002563,9.63e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!7.60e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:3030;3.67e-23;1!DOID:5409;6.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.62e-23,1;DOID:5409,6.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002619!8.69e-31!22;UBERON:0001950!2.87e-29!20;UBERON:0001869!6.88e-27!32;UBERON:0000956!7.63e-27!25;UBERON:0000203!7.63e-27!25;UBERON:0001893!3.99e-25!34;UBERON:0002020!5.60e-25!34;UBERON:0003528!5.60e-25!34;UBERON:0002616!2.75e-23!59;UBERON:0002791!1.28e-22!33;UBERON:0001049!7.08e-22!57;UBERON:0005068!7.08e-22!57;UBERON:0006241!7.08e-22!57;UBERON:0007135!7.08e-22!57;UBERON:0000955!6.41e-21!69;UBERON:0006238!6.41e-21!69;UBERON:0000073!1.75e-20!94;UBERON:0001016!1.75e-20!94;UBERON:0002780!2.79e-20!41;UBERON:0001890!2.79e-20!41;UBERON:0006240!2.79e-20!41;UBERON:0003080!1.02e-19!42;UBERON:0007023!3.12e-19!115;UBERON:0001017!1.31e-18!82;UBERON:0005743!1.66e-17!86;UBERON:0002346!5.79e-17!90;UBERON:0000200!8.24e-17!6;UBERON:0003075!1.82e-14!86;UBERON:0007284!1.82e-14!86;UBERON:0002771!8.28e-13!3;UBERON:0003056!1.69e-12!61;UBERON:0001871!2.61e-12!7;UBERON:0000033!1.02e-10!123;UBERON:0000924!1.81e-10!173;UBERON:0006601!1.81e-10!173;UBERON:0000153!5.57e-10!129;UBERON:0007811!5.57e-10!129;UBERON:0004121!7.50e-09!169;UBERON:0002021!6.78e-08!5;UBERON:0001872!8.16e-08!5;UBERON:0000013!1.44e-07!5;UBERON:0002410!1.44e-07!5;UBERON:0002298!1.69e-07!8;UBERON:0000349!1.98e-07!5;UBERON:0000025!3.70e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.67e-23;1!UBERON:0006518;3.67e-23;1!UBERON:0008949;3.67e-23;1!UBERON:0000101;3.67e-23;1!UBERON:0002167;3.67e-23;1!UBERON:0002771;2.74e-12;2!UBERON:0001950;4.17e-10;20!UBERON:0002619;2.78e-09;22!UBERON:0000956;2.79e-08;25!UBERON:0000203;2.79e-08;25!UBERON:0002346;6.50e-07;4!UBERON:0000923;6.50e-07;4!UBERON:0010316;6.50e-07;4!UBERON:0005291;6.50e-07;4!UBERON:0001052;8.85e-07;4!UBERON:0001242;8.85e-07;4!UBERON:0001262;8.85e-07;4!UBERON:0004786;8.85e-07;4!UBERON:0004808;8.85e-07;4!UBERON:0001277;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.10e-23,1;UBERON:0006518,2.10e-23,1;UBERON:0008949,2.10e-23,1;UBERON:0000101,2.10e-23,1;UBERON:0002167,2.10e-23,1;UBERON:0002771,2.90e-12,2;UBERON:0001950,4.58e-10,20;UBERON:0002619,3.03e-09,22;UBERON:0000956,3.01e-08,25;UBERON:0000203,3.01e-08,25;UBERON:0001052,9.63e-07,4;UBERON:0001242,9.63e-07,4;UBERON:0001262,9.63e-07,4;UBERON:0004786,9.63e-07,4;UBERON:0004808,9.63e-07,4;UBERON:0001277,9.63e-07,4 | |||
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| ||
|short_description=p@chr18:12059774..12059782,- | |||
}} | }} |
Latest revision as of 23:39, 25 July 2015
Short description: | p@chr18:12059774..12059782, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:12059774..12059782, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.62e-23 | 1 |
seromucus secreting cell | 2.32e-12 | 2 |
epithelial cell of large intestine | 3.24e-12 | 2 |
intestinal epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.10e-23 | 1 |
right lung lobe | 2.10e-23 | 1 |
lower lobe of lung | 2.10e-23 | 1 |
lobe of lung | 2.10e-23 | 1 |
right lung | 2.10e-23 | 1 |
middle temporal gyrus | 2.90e-12 | 2 |
neocortex | 4.58e-10 | 20 |
regional part of cerebral cortex | 3.03e-09 | 22 |
cerebral cortex | 3.01e-08 | 25 |
pallium | 3.01e-08 | 25 |
rectum | 9.63e-07 | 4 |
intestinal mucosa | 9.63e-07 | 4 |
wall of intestine | 9.63e-07 | 4 |
gastrointestinal system mucosa | 9.63e-07 | 4 |
gastrointestinal system epithelium | 9.63e-07 | 4 |
intestinal epithelium | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.62e-23 | 1 |
lung small cell carcinoma | 6.87e-07 | 4 |