FFCP PHASE1:Hg19::chr19:50016725..50016736,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:50016725..50016736,+ to FFCP PHASE1:Hg19::chr19:50016725..50016736,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2217 | |EntrezGene=2217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3621 | |HGNC=3621 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=273bp_to_uc002pof.1_5end | |||
|cluster_id=chr19:50016725..50016736,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_FCGRT_5end | |||
|id=chr19:50016725..50016736,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.12e-28!42;CL:0000766!1.65e-26!76;CL:0000860!2.17e-24!45;CL:0002009!4.86e-24!65;CL:0002194!8.52e-23!63;CL:0000576!8.52e-23!63;CL:0000040!8.52e-23!63;CL:0000559!8.52e-23!63;CL:0000839!5.82e-22!70;CL:0000557!2.27e-21!71;CL:0000763!2.45e-21!112;CL:0000049!2.45e-21!112;CL:0000738!6.53e-20!140;CL:0000037!1.01e-16!172;CL:0000566!1.01e-16!172;CL:0000988!1.24e-16!182;CL:0002032!8.94e-15!165;CL:0000837!8.94e-15!165;CL:0002087!9.39e-14!119;CL:0002031!1.45e-13!124;CL:0000094!9.54e-08!8;CL:0002393!3.68e-07!9;CL:0002397!3.68e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.62e-43;33!CL:0002057;5.62e-43;33!CL:0000576;3.13e-39;48!CL:0000473;4.79e-31;39!CL:0000234;4.79e-31;39!CL:0000766;4.50e-27;69!CL:0000094;5.32e-16;8!CL:0000763;6.35e-13;100!CL:0000081;4.18e-11;11!CL:0002087;9.21e-10;104!CL:0000738;1.32e-09;136!CL:0002393;1.16e-07;6!CL:0002397;1.16e-07;6!CL:0000775;2.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.75e-58,42;CL:0002057,3.75e-58,42;CL:0000766,5.67e-58,72;CL:0002009,1.35e-52,61;CL:0000473,8.67e-52,48;CL:0000234,8.67e-52,48;CL:0002194,1.12e-49,59;CL:0000576,1.12e-49,59;CL:0000040,1.12e-49,59;CL:0000559,1.12e-49,59;CL:0000839,2.60e-47,66;CL:0000557,1.31e-46,67;CL:0000763,1.35e-44,108;CL:0000049,1.35e-44,108;CL:0000738,2.98e-40,136;CL:0000037,1.91e-32,168;CL:0000988,8.53e-30,177;CL:0002032,1.12e-29,161;CL:0000837,1.12e-29,161;CL:0002031,3.92e-28,120;CL:0002087,3.78e-27,115;CL:0000094,6.77e-16,8;CL:0002393,5.58e-12,9;CL:0002397,5.58e-12,9;CL:0000081,4.94e-11,11;CL:0000134,3.74e-08,354;CL:0002320,1.14e-07,361;CL:0000775,2.32e-07,3;CL:0000219,3.10e-07,386;CL:0000451,9.74e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-41;42!CL:0000049;8.84e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.31e-24!102;UBERON:0003061!2.31e-24!102;UBERON:0002193!2.01e-21!112;UBERON:0002371!5.03e-17!80;UBERON:0001474!3.50e-16!86;UBERON:0002405!1.12e-13!115;UBERON:0004765!2.86e-11!101;UBERON:0001434!2.86e-11!101;UBERON:0000178!4.60e-08!15;UBERON:0000179!4.60e-08!15;UBERON:0000463!4.60e-08!15;UBERON:0003081!7.17e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.31e-13;15!UBERON:0000179;1.31e-13;15!UBERON:0000463;1.31e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.66e-49,98;UBERON:0003061,5.66e-49,98;UBERON:0002193,8.56e-43,108;UBERON:0002371,2.13e-39,76;UBERON:0001474,3.17e-37,82;UBERON:0004765,1.24e-32,90;UBERON:0002405,5.38e-31,93;UBERON:0001434,6.17e-28,100;UBERON:0003081,4.42e-18,203;UBERON:0000178,1.52e-13,15;UBERON:0000179,1.52e-13,15;UBERON:0000463,1.52e-13,15;UBERON:0002204,7.03e-13,167;UBERON:0000926,2.12e-09,315;UBERON:0004120,2.12e-09,315;UBERON:0006603,2.12e-09,315;UBERON:0002384,5.61e-08,371 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0.487932798790507,0.738726348460727,0,0.313454721478088,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,4.32700704533794,3.0706351847777,4.18003532953405,0,0,0,0,0.142169232487422,0.880801318004542,4.43196326825502,0.802177789880567,1.73608696572681,2.01523926815932,0.971680998056939,1.80302897343931,0.872389432677388,3.77875943688809,2.42584061187816,2.55671940596253,2.46700732813095,1.85823822537062,2.58923153089935,2.81776777182011,13.9524515634265,2.75796544589295,4.51839278508678,0,3.57660445130949,3.82068610080984,6.96642801779762,3.06083892370903,13.4790191371959,4.47535988059329,1.31940520074686,1.39624560335142,3.40979800426155,4.06292934080018,5.6738522469114,4.35975574296902,2.00998932205395,4.17186334736161,10.4250645458456,2.42159801053347,11.7848843516021,13.607882659958,3.59133986730301,3.82687739937078,6.70907665626803,9.88491954089157,7.80919842775833,8.19700492155109,3.42015292489498,2.18808344918999,2.19196984517561,0,0,1.77901850772711,0,0.400395987036012,0.574752439954483,0,0.954053754535364,0,0,0,1.32171328579026,1.68152568894461,0.526768169550154,0,0,0.411202997999018,0.167186495390678,0,0,0,0,0.294605907474837,0.664601683750863,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0.579606171470105,0.296573126324121,0.267540828089713,0,0.339928028092699,0.383220493601921,0,0.759059076058509,0.637130828648193,0.651083453856419,0,1.05402583354441,0.255973222308837,2.49861453104692,0.947109008176067,0.821127996921047,0,0,0,0,0,0.255725123687061,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,2.94702919869853,0,0.370784442784429,0,0.348259474598534,0.132957960518865,1.66943437013739,2.85997455390064,2.60020250930695,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0.183201743930407,54.0299711487859,38.7780264148325,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0,0.309157587715317,0,0,0,0,0,0,0.161646056818812,0,0.302256294682921,0,0,0,0,0.243947412259191,0,0.116193942869518,0.414644220061482,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,1.96781501668982,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.811512834825538,0.352226082707465,0,0,0,0,0,0.492434012174795,0.468008530278475,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0.253991577168676,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0.502257091432126,0,0.479249710983165,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0.508189248444927,0,0,0.670065061337395,0.637938751653163,41.9443933410422,14.9580729602012,42.6847978839116,0,0,0,0,0.356857977594324,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0.783204629850962,0,2.27444828735176,1.07857100409308,0.533637789017222,0,3.32870879020994,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0.131124414959424,0,0,0.784349769176855,0,0.105551628892876,0,0,0,3.08454505380579,0.270946437543853,0.501689773854853,0,0,0,1.09629938322967,3.13722541229881,0,0.328014645699706,0,0.721287081534056,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0.10115778085555,0,0.31481234683064,0,0.924100740528266,0,0,0.37064843820784,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0.563391205064483,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0.753150406214233,0,0,0,0,7.10426652925037,11.4695581071356,4.5571774973933,4.2881719582402,6.58179636937911,7.78167973431261,10.2605973075242,3.96562588147135,0.213648142254946,0,0,0.185803175125719,0,1.63626239701352,1.91311527274587,0,0.766021480529467,0.211673582723883,0.324621940274555,0,0,0,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0.343505344755765,0,1.11838053946208,1.00109485027145,0.19538809540204,0,0,0,0,0,0,3.07667176470977,0.242721043499027,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0.503865495708552,0.409074730008619,0,0,0.0898683511473268,0,0,0.789147245095469,4.7896618469388,0,0,0.278304294485554,0,0,0.174919999992391,0,0,0.762760950878299,0.236387681767936,0,2.04123229368278,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.41827123283581,0.692552326534174,0,0,0.718061155278177,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,1.11255605286265,0,0.163232808159148,2.40300221437699,0.432777279484182,1.99052386215701,4.59979335417364,2.4441205797345,0,0.123563938946503,0.208843899010911,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,2.4198143209732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| ||
|short_description=p6@FCGRT | |||
}} | }} |
Latest revision as of 08:01, 19 September 2015
Short description: | p6@FCGRT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FCGRT_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 273bp_to_uc002pof.1_5end |
EntrezGene: | FCGRT |
HGNC: | 3621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.75e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.75e-58 | 42 |
myeloid leukocyte | 5.67e-58 | 72 |
macrophage dendritic cell progenitor | 1.35e-52 | 61 |
defensive cell | 8.67e-52 | 48 |
phagocyte | 8.67e-52 | 48 |
monopoietic cell | 1.12e-49 | 59 |
monocyte | 1.12e-49 | 59 |
monoblast | 1.12e-49 | 59 |
promonocyte | 1.12e-49 | 59 |
myeloid lineage restricted progenitor cell | 2.60e-47 | 66 |
granulocyte monocyte progenitor cell | 1.31e-46 | 67 |
myeloid cell | 1.35e-44 | 108 |
common myeloid progenitor | 1.35e-44 | 108 |
leukocyte | 2.98e-40 | 136 |
hematopoietic stem cell | 1.91e-32 | 168 |
hematopoietic cell | 8.53e-30 | 177 |
hematopoietic oligopotent progenitor cell | 1.12e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-29 | 161 |
hematopoietic lineage restricted progenitor cell | 3.92e-28 | 120 |
nongranular leukocyte | 3.78e-27 | 115 |
granulocyte | 6.77e-16 | 8 |
intermediate monocyte | 5.58e-12 | 9 |
CD14-positive, CD16-positive monocyte | 5.58e-12 | 9 |
blood cell | 4.94e-11 | 11 |
mesenchymal cell | 3.74e-08 | 354 |
connective tissue cell | 1.14e-07 | 361 |
neutrophil | 2.32e-07 | 3 |
motile cell | 3.10e-07 | 386 |
dendritic cell | 9.74e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.66e-49 | 98 |
blood island | 5.66e-49 | 98 |
hemolymphoid system | 8.56e-43 | 108 |
bone marrow | 2.13e-39 | 76 |
bone element | 3.17e-37 | 82 |
skeletal element | 1.24e-32 | 90 |
immune system | 5.38e-31 | 93 |
skeletal system | 6.17e-28 | 100 |
lateral plate mesoderm | 4.42e-18 | 203 |
blood | 1.52e-13 | 15 |
haemolymphatic fluid | 1.52e-13 | 15 |
organism substance | 1.52e-13 | 15 |
musculoskeletal system | 7.03e-13 | 167 |
mesoderm | 2.12e-09 | 315 |
mesoderm-derived structure | 2.12e-09 | 315 |
presumptive mesoderm | 2.12e-09 | 315 |
connective tissue | 5.61e-08 | 371 |