FFCP PHASE1:Hg19::chr19:54705025..54705034,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr19:54705025..54705034,+ to FFCP PHASE1:Hg19::chr19:54705025..54705034,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6203 | |EntrezGene=6203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10442 | |HGNC=10442 | ||
|TSSclassifier=strong | |||
|UniProt=C9JM19 | |UniProt=C9JM19 | ||
|association_with_transcript=0bp_to_ENST00000441429,ENST00000460761,uc002qeb.2,uc002qec.2,uc002qed.1_5end | |||
|cluster_id=chr19:54705025..54705034,+ | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_7_at_RPS9_5end | |||
|id=chr19:54705025..54705034,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-54!42;CL:0000860!4.30e-50!45;CL:0000839!3.55e-41!70;CL:0000557!2.11e-40!71;CL:0002009!2.69e-37!65;CL:0000766!3.93e-35!76;CL:0002194!6.45e-35!63;CL:0000576!6.45e-35!63;CL:0000040!6.45e-35!63;CL:0000559!6.45e-35!63;CL:0000763!2.19e-28!112;CL:0000049!2.19e-28!112;CL:0002031!7.14e-24!124;CL:0000738!2.57e-20!140;CL:0002032!5.72e-18!165;CL:0000837!5.72e-18!165;CL:0000037!1.91e-17!172;CL:0000566!1.91e-17!172;CL:0002087!1.14e-16!119;CL:0000988!1.52e-15!182;CL:0000134!9.46e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.01e-95;33!CL:0002057;7.01e-95;33!CL:0000473;9.26e-71;39!CL:0000234;9.26e-71;39!CL:0000576;8.32e-51;48!CL:0000766;2.11e-36;69!CL:0000763;6.53e-15;100!CL:0002087;1.93e-10;104!CL:0000738;3.45e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.71e-93,42;CL:0002057,5.71e-93,42;CL:0000473,3.76e-86,48;CL:0000234,3.76e-86,48;CL:0000839,6.30e-72,66;CL:0002194,1.92e-67,59;CL:0000576,1.92e-67,59;CL:0000040,1.92e-67,59;CL:0000559,1.92e-67,59;CL:0000557,1.34e-66,67;CL:0000766,1.04e-65,72;CL:0002009,5.00e-65,61;CL:0000763,4.80e-44,108;CL:0000049,4.80e-44,108;CL:0002031,2.53e-36,120;CL:0000738,2.22e-33,136;CL:0002087,2.68e-31,115;CL:0000037,3.00e-27,168;CL:0002032,5.20e-27,161;CL:0000837,5.20e-27,161;CL:0000988,1.85e-25,177;CL:0000134,2.85e-10,354;CL:0002320,6.56e-10,361;CL:0000048,2.69e-09,427;CL:0000723,4.80e-09,433;CL:0000034,1.02e-08,441;CL:0000219,1.22e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-68;42!CL:0000049;3.00e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.19e-34!80;UBERON:0001474!1.20e-30!86;UBERON:0004765!7.41e-28!101;UBERON:0001434!7.41e-28!101;UBERON:0002390!1.82e-23!102;UBERON:0003061!1.82e-23!102;UBERON:0002193!3.58e-22!112;UBERON:0002405!3.39e-21!115;UBERON:0002204!1.12e-15!167;UBERON:0001737!3.54e-12!9;UBERON:0003081!1.46e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.46e-58,76;UBERON:0001474,3.58e-53,82;UBERON:0004765,8.08e-48,90;UBERON:0002405,4.79e-46,93;UBERON:0002390,2.49e-43,98;UBERON:0003061,2.49e-43,98;UBERON:0001434,2.56e-42,100;UBERON:0002193,1.21e-38,108;UBERON:0002204,1.33e-27,167;UBERON:0003081,2.74e-21,203;UBERON:0000926,9.44e-12,315;UBERON:0004120,9.44e-12,315;UBERON:0006603,9.44e-12,315;UBERON:0002384,2.04e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.80808358407193,2.92124036154949,0,0,0,0,0,0,0,0,0,0,0,0,3.40595471295367,0,0,0,0,0,0,0,0,0,0,0,0,1.16318591023652,1.51150377475524,0.970336244751265,1.39457422143411,2.46700732813095,2.78735733805593,1.7261543539329,2.81776777182011,2.12834006899727,1.72372840368309,1.93645405075148,1.35426486594342,1.31769637679823,1.63743690034707,2.9214052977861,0.612167784741805,1.92557416245656,1.27867425159808,0.989553900560148,1.99463657621632,2.98357325372886,2.03146467040009,1.70215567407342,3.11411124497787,2.26123798731069,3.12889751052121,3.25783267057675,0.605399502633369,2.20966581592539,1.89877432464531,1.05627643155971,0.850417199860174,2.72556239160889,1.01095768031846,3.15371474967163,1.92870704036496,0.285012743741249,0.79566670879636,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0.664601683750863,0,0,0,0.493313713811028,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0.759059076058509,0,0.651083453856419,0,0.301150238155546,0.639933055772092,0,0.236777252044017,0,0,0,0,0,0,2.42938867502708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675105328965065,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0.756962552626885,0.36497735907583,0,0,0,0,0,0.591534000199219,0.505754070234305,0.482022059766964,0.882351781859152,0.217879444092406,0.474541238222193,0.539325232640658,0.98110732562673,2.30848294167834,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.587043471179108,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0.93733833986777,0.671928512795438,0.708875486211932,0,0,0,0,0.088048434013226,0.829312462163088,1.29707958075265,1.51490920111656,0.253991577168676,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.785992328104969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0.803765742325096,0.687697182986169,0,0.899895566206002,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,1.65882483136342,0,0.521745061811734,0,0.380805212168795,0,0,0,0.928067519756987,0.398095888698616,0.400027764663154,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,1.07140367175657,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.80808358407193,2.92124036154949,0,0,0,0,0,0,0,0,0,0,0,0,3.40595471295367,0,0,0,0,0,0,0,0,0,0,0,0,1.16318591023652,1.51150377475524,0.970336244751265,1.39457422143411,2.46700732813095,2.78735733805593,1.7261543539329,2.81776777182011,2.12834006899727,1.72372840368309,1.93645405075148,1.35426486594342,1.31769637679823,1.63743690034707,2.9214052977861,0.612167784741805,1.92557416245656,1.27867425159808,0.989553900560148,1.99463657621632,2.98357325372886,2.03146467040009,1.70215567407342,3.11411124497787,2.26123798731069,3.12889751052121,3.25783267057675,0.605399502633369,2.20966581592539,1.89877432464531,1.05627643155971,0.850417199860174,2.72556239160889,1.01095768031846,3.15371474967163,1.92870704036496,0.285012743741249,0.79566670879636,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0.664601683750863,0,0,0,0.493313713811028,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0.759059076058509,0,0.651083453856419,0,0.301150238155546,0.639933055772092,0,0.236777252044017,0,0,0,0,0,0,2.42938867502708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675105328965065,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0.756962552626885,0.36497735907583,0,0,0,0,0,0.591534000199219,0.505754070234305,0.482022059766964,0.882351781859152,0.217879444092406,0.474541238222193,0.539325232640658,0.98110732562673,2.30848294167834,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.587043471179108,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0.93733833986777,0.671928512795438,0.708875486211932,0,0,0,0,0.088048434013226,0.829312462163088,1.29707958075265,1.51490920111656,0.253991577168676,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.785992328104969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0.803765742325096,0.687697182986169,0,0.899895566206002,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,1.65882483136342,0,0.521745061811734,0,0.380805212168795,0,0,0,0.928067519756987,0.398095888698616,0.400027764663154,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,1.07140367175657,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@RPS9 | |||
}} | }} |
Latest revision as of 21:33, 19 September 2015
Short description: | p7@RPS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RPS9_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | 0bp_to_ENST00000441429, ENST00000460761, uc002qeb.2, uc002qec.2, uc002qed.1_5end |
EntrezGene: | RPS9 |
HGNC: | 10442 |
UniProt: | C9JM19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.71e-93 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.71e-93 | 42 |
defensive cell | 3.76e-86 | 48 |
phagocyte | 3.76e-86 | 48 |
myeloid lineage restricted progenitor cell | 6.30e-72 | 66 |
monopoietic cell | 1.92e-67 | 59 |
monocyte | 1.92e-67 | 59 |
monoblast | 1.92e-67 | 59 |
promonocyte | 1.92e-67 | 59 |
granulocyte monocyte progenitor cell | 1.34e-66 | 67 |
myeloid leukocyte | 1.04e-65 | 72 |
macrophage dendritic cell progenitor | 5.00e-65 | 61 |
myeloid cell | 4.80e-44 | 108 |
common myeloid progenitor | 4.80e-44 | 108 |
hematopoietic lineage restricted progenitor cell | 2.53e-36 | 120 |
leukocyte | 2.22e-33 | 136 |
nongranular leukocyte | 2.68e-31 | 115 |
hematopoietic stem cell | 3.00e-27 | 168 |
hematopoietic oligopotent progenitor cell | 5.20e-27 | 161 |
hematopoietic multipotent progenitor cell | 5.20e-27 | 161 |
hematopoietic cell | 1.85e-25 | 177 |
mesenchymal cell | 2.85e-10 | 354 |
connective tissue cell | 6.56e-10 | 361 |
multi fate stem cell | 2.69e-09 | 427 |
somatic stem cell | 4.80e-09 | 433 |
stem cell | 1.02e-08 | 441 |
motile cell | 1.22e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.46e-58 | 76 |
bone element | 3.58e-53 | 82 |
skeletal element | 8.08e-48 | 90 |
immune system | 4.79e-46 | 93 |
hematopoietic system | 2.49e-43 | 98 |
blood island | 2.49e-43 | 98 |
skeletal system | 2.56e-42 | 100 |
hemolymphoid system | 1.21e-38 | 108 |
musculoskeletal system | 1.33e-27 | 167 |
lateral plate mesoderm | 2.74e-21 | 203 |
mesoderm | 9.44e-12 | 315 |
mesoderm-derived structure | 9.44e-12 | 315 |
presumptive mesoderm | 9.44e-12 | 315 |
connective tissue | 2.04e-09 | 371 |