FFCP PHASE1:Hg19::chr19:55476646..55476685,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55655 | |EntrezGene=55655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22948 | |HGNC=22948 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NX02 | |UniProt=Q9NX02 | ||
|association_with_transcript=0bp_to_ENST00000540597,NM_001174081_5end | |||
|cluster_id=chr19:55476646..55476685,+ | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_2_at_NLRP2_5end | |||
|id=chr19:55476646..55476685,+ | |||
|ontology_enrichment_celltype=CL:0000039!8.33e-16!7;CL:0000586!8.33e-16!7;CL:0002322!1.35e-10!5;CL:0002541!7.74e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.85e-42;7!CL:0000586;3.85e-42;7!CL:0002541;3.78e-36;3!CL:0002322;3.26e-10;5!CL:0000349;3.35e-10;19!CL:0002262;4.29e-07;2!CL:1000398;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.75e-42,7;CL:0000586,2.75e-42,7;CL:0002541,3.79e-36,3;CL:0000349,3.00e-10,19;CL:0002322,3.76e-10,5;CL:0002262,3.70e-07,2;CL:1000398,3.70e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.92e-19;10!UBERON:0005564;3.92e-19;10 | |||
|ontology_enrichment_disease=DOID:3095!4.17e-08!22;DOID:2994!4.17e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.96e-13;22!DOID:2994;1.96e-13;22!DOID:1799;2.05e-13;1!DOID:10165;2.05e-13;1!DOID:1798;2.05e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.76e-13,22;DOID:2994,1.76e-13,22;DOID:1799,2.06e-13,1;DOID:10165,2.06e-13,1;DOID:1798,2.06e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.29e-10!8;UBERON:0003135!5.90e-09!11;UBERON:0005631!8.19e-09!14;UBERON:0000158!8.19e-09!14;UBERON:0003124!3.61e-08!7;UBERON:0003133!4.48e-08!48;UBERON:0000476!7.74e-08!3;UBERON:0000920!7.74e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.78e-36;3!UBERON:0000920;3.78e-36;3!UBERON:0000473;7.91e-24;8!UBERON:0003135;2.01e-17;11!UBERON:0005631;2.64e-11;10!UBERON:0000158;2.64e-11;10!UBERON:0000991;3.03e-09;21!UBERON:0003101;7.81e-09;22!UBERON:0000079;7.81e-09;22!UBERON:0000478;4.07e-08;24!UBERON:0001281;4.29e-07;2!UBERON:0003497;4.29e-07;2!UBERON:0003909;4.29e-07;2!UBERON:0003835;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.79e-36,3;UBERON:0003124,2.54e-27,7;UBERON:0000473,6.26e-24,8;UBERON:0003135,1.70e-17,11;UBERON:0005631,7.99e-14,14;UBERON:0000158,7.99e-14,14;UBERON:0000991,2.78e-09,21;UBERON:0009196,2.78e-09,21;UBERON:0009117,2.78e-09,21;UBERON:0005564,2.78e-09,21;UBERON:0004176,7.19e-09,22;UBERON:0003101,7.19e-09,22;UBERON:0000079,7.19e-09,22;UBERON:0000478,3.74e-08,24;UBERON:0001281,3.70e-07,2;UBERON:0003497,3.70e-07,2;UBERON:0003909,3.70e-07,2;UBERON:0003835,3.70e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.365921118388786,0.265059536642971,1.39432731443422,0.414644220061482,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0.95497793895076,0.296964680832639,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0.922255617552241,21.272561725116,0.977826347298073,2.23300811812344,3.38911095586891,5.33034776018635,0,0,0.664846727600626,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.293977192243133,0.174118413160805,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,9.95245439029405,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0.467878926924211,0,0,0,0.219881033490858,0,0,0,0,0,0.707029641304878,0,0.297046400327086,0,0,0.0939839179798536,0,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0.253397002022874,1.52983244612973,8.28373956323238,1.28652859348783,12.5353769646188,0.757786982182394,0.535928260312357,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.365921118388786,0.265059536642971,1.39432731443422,0.414644220061482,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0.18714054040822,0,0.121360521749513,0,0,0.95497793895076,0.296964680832639,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.557694977114413,0.0769502585037971,0,0.922255617552241,21.272561725116,0.977826347298073,2.23300811812344,3.38911095586891,5.33034776018635,0,0,0.664846727600626,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.293977192243133,0.174118413160805,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,9.95245439029405,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0.467878926924211,0,0,0,0.219881033490858,0,0,0,0,0,0.707029641304878,0,0.297046400327086,0,0,0.0939839179798536,0,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0.253397002022874,1.52983244612973,8.28373956323238,1.28652859348783,12.5353769646188,0.757786982182394,0.535928260312357,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@NLRP2 | |||
}} | }} |
Latest revision as of 23:24, 19 September 2015
Short description: | p2@NLRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NLRP2_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | 0bp_to_ENST00000540597, NM_001174081_5end |
EntrezGene: | NLRP2 |
HGNC: | 22948 |
UniProt: | Q9NX02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.75e-42 | 7 |
germ cell | 2.75e-42 | 7 |
chorionic membrane mesenchymal stem cell | 3.79e-36 | 3 |
extraembryonic cell | 3.00e-10 | 19 |
embryonic stem cell | 3.76e-10 | 5 |
endothelial cell of sinusoid | 3.70e-07 | 2 |
endothelial cell of hepatic sinusoid | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.79e-36 | 3 |
chorion | 2.54e-27 | 7 |
testis | 6.26e-24 | 8 |
male reproductive organ | 1.70e-17 | 11 |
extraembryonic membrane | 7.99e-14 | 14 |
membranous layer | 7.99e-14 | 14 |
gonad | 2.78e-09 | 21 |
indifferent external genitalia | 2.78e-09 | 21 |
indifferent gonad | 2.78e-09 | 21 |
gonad primordium | 2.78e-09 | 21 |
external genitalia | 7.19e-09 | 22 |
male organism | 7.19e-09 | 22 |
male reproductive system | 7.19e-09 | 22 |
extraembryonic structure | 3.74e-08 | 24 |
hepatic sinusoid | 3.70e-07 | 2 |
abdomen blood vessel | 3.70e-07 | 2 |
sinusoid | 3.70e-07 | 2 |
abdominal segment blood vessel | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.76e-13 | 22 |
germ cell cancer | 1.76e-13 | 22 |
islet cell tumor | 2.06e-13 | 1 |
endocrine pancreas cancer | 2.06e-13 | 1 |
pancreatic endocrine carcinoma | 2.06e-13 | 1 |