FFCP PHASE1:Hg19::chr1:1290090..1290114,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:1290090..1290114,- to FFCP PHASE1:Hg19::chr1:1290090..1290114,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54587 | |EntrezGene=54587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7542 | |HGNC=7542 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-236bp_to_ENST00000473097_5end | |||
|cluster_id=chr1:1290090..1290114,- | |||
|coexpression_cluster_id=C1000 | |||
|description=CAGE_peak_4_at_MXRA8_5end | |||
|id=chr1:1290090..1290114,- | |||
|ontology_enrichment_celltype=CL:0000055!2.74e-30!180;CL:0000057!2.21e-22!75;CL:0000183!1.82e-11!59;CL:0000680!2.07e-11!57;CL:0000056!2.07e-11!57;CL:0000355!2.07e-11!57;CL:0002620!2.90e-10!23;CL:0000187!4.01e-10!54;CL:0002334!1.24e-09!12;CL:0000034!2.53e-09!444;CL:0000048!2.93e-09!430;CL:0000723!3.99e-09!436;CL:0000393!5.91e-08!60;CL:0000211!5.91e-08!60;CL:0000192!7.72e-08!42;CL:0000514!7.72e-08!42;CL:0002371!4.36e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.50e-10;12!CL:0002595;2.26e-10;5!CL:0000136;2.75e-08;13!CL:0000135;3.35e-08;3!CL:0000388;3.35e-08;3!CL:0002559;4.16e-08;5!CL:0002615;7.87e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.72e-15,76;CL:0000136,4.09e-11,15;CL:0002334,8.27e-11,12;CL:0002595,4.18e-10,5;CL:0000048,1.70e-08,427;CL:0002320,1.90e-08,361;CL:0000135,3.35e-08,3;CL:0000388,3.35e-08,3;CL:0000723,3.76e-08,433;CL:0002559,4.13e-08,5;CL:0000034,1.04e-07,441;CL:0002615,1.10e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.26e-14!83;UBERON:0002329!3.26e-14!83;UBERON:0003077!3.26e-14!83;UBERON:0003059!3.26e-14!83;UBERON:0007282!3.26e-14!83;UBERON:0009618!3.26e-14!83;UBERON:0007285!3.26e-14!83;UBERON:0004290!1.11e-12!70;UBERON:0000486!9.11e-11!82;UBERON:0001134!2.49e-10!61;UBERON:0002036!2.49e-10!61;UBERON:0003082!2.49e-10!61;UBERON:0002385!3.96e-10!63;UBERON:0001015!3.96e-10!63;UBERON:0000383!3.96e-10!63;UBERON:0005256!5.32e-10!143;UBERON:0004923!7.34e-10!57;UBERON:0002100!1.78e-08!216;UBERON:0000475!2.89e-08!365;UBERON:0002199!8.44e-08!45;UBERON:0002416!8.44e-08!45;UBERON:0003102!1.52e-07!95;UBERON:0002097!5.94e-07!40;UBERON:0005631!9.17e-07!14;UBERON:0000158!9.17e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;5.69e-13;8!UBERON:0000982;5.69e-13;8!UBERON:0004770;5.69e-13;8!UBERON:0004457;9.52e-12;9!UBERON:0000042;9.52e-12;9!UBERON:0011135;1.05e-10;5!UBERON:0002216;1.05e-10;5!UBERON:0011134;1.05e-10;5!UBERON:0002209;1.05e-10;5!UBERON:0002213;1.05e-10;5!UBERON:0007844;1.05e-10;5!UBERON:0011138;1.05e-10;5!UBERON:0001130;1.05e-10;5!UBERON:0001066;1.05e-10;5!UBERON:0001468;1.05e-10;5!UBERON:0003834;2.26e-10;5!UBERON:0001533;2.26e-10;5!UBERON:0003688;3.16e-09;6!UBERON:0002358;3.16e-09;6!UBERON:0003684;3.16e-09;6!UBERON:0001178;3.16e-09;6!UBERON:0007846;3.35e-08;3!UBERON:0000043;3.35e-08;3!UBERON:0007845;3.35e-08;3!UBERON:0002073;4.16e-08;5!UBERON:0003513;2.67e-07;7!UBERON:0001013;2.70e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,4.77e-13,8;UBERON:0000982,4.77e-13,8;UBERON:0004770,4.77e-13,8;UBERON:0011135,1.06e-10,5;UBERON:0002216,1.06e-10,5;UBERON:0011134,1.06e-10,5;UBERON:0002209,1.06e-10,5;UBERON:0002213,1.06e-10,5;UBERON:0005856,1.06e-10,5;UBERON:0005866,1.06e-10,5;UBERON:0005863,1.06e-10,5;UBERON:0007844,1.06e-10,5;UBERON:0011138,1.06e-10,5;UBERON:0001130,1.06e-10,5;UBERON:0001066,1.06e-10,5;UBERON:0001468,1.06e-10,5;UBERON:0003834,4.18e-10,5;UBERON:0001533,4.18e-10,5;UBERON:0003688,3.53e-09,6;UBERON:0002358,3.53e-09,6;UBERON:0003684,3.53e-09,6;UBERON:0001178,3.53e-09,6;UBERON:0004457,1.60e-08,12;UBERON:0000042,1.60e-08,12;UBERON:0002384,2.43e-08,371;UBERON:0007846,3.35e-08,3;UBERON:0000043,3.35e-08,3;UBERON:0007845,3.35e-08,3;UBERON:0002073,4.13e-08,5;UBERON:0005086,4.13e-08,5;UBERON:0004923,2.37e-07,66;UBERON:0002199,3.76e-07,46;UBERON:0002416,3.76e-07,46;UBERON:0001013,3.83e-07,14;UBERON:0003513,4.08e-07,7 | |||
|phase1_expression=3.63356758541113,7.06531728840244,1.26858963686374,5.00366491765652,6.25745532198203,5.23403114460221,0,0,2.35067065379855,0,1.39560233594486,0.436882744260345,1.58260186937072,2.22779435328084,2.31978163009541,0.672325146451775,0.602694528023977,1.46062018077475,1.46379839637152,0,0.408001382488506,2.19418305034661,0.286235987131057,0.684372125364421,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.361439152384566,0.50133791063589,2.75208386025565,0,0.486634870302636,0,1.10864698731282,0.790513071238134,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,1.49091585508596,0.506522046658319,0.397227542439656,1.72101972449288,0.354668382198357,1.68203280042692,0,0.98667019366864,0,0.269421344139376,0,0,1.15235184896,0.234321431833797,0,0.570471821544449,1.79338416662161,0.939475989150119,0.485618833104395,0.140450806702248,0.816616685019573,1.22834317311768,0.929932030581889,1.18800285728205,3.21447008062124,0,1.43723628363248,0,0.625592599359821,0.277064115484183,0,3.67785354958824,2.70428506031874,0,0.89694817844431,0.427114777637135,0.211931901159562,1.50045548042201,0.309157587715317,1.54584324027377,1.48893485065272,0.843881661206331,1.46155507741798,1.00973509697646,0.552299391853796,0.646584227275248,3.19508633264953,0.604512589365842,0.339121184620975,0,0,0,0.243947412259191,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,5.14592750554308,2.76269842704961,5.10804720835177,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,7.15312891703765,0,0.797814349754612,2.08014873822732,0.514414748524284,1.41849132023278,0.266422179016099,0.428933980974443,2.71310802695722,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0.479249710983165,0,0,0.579125226670317,2.67119219315498,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,1.00034104211935,1.89885516589815,0.623912584592421,5.35286966391485,0.946214490203608,0.819989904948992,1.80567659836631,6.82222512167955,5.17365356462525,0,1.29058417979192,0.434418072340414,0.391602314925481,3.43143423810856,0,0,0,0.303127571446259,0,1.81434175997808,1.48864684691266,0.920771839728375,7.57782254969299,1.53766979106841,0.511707249066704,1.44768529029247,7.42090332224955,1.69630663182921,1.59805552781814,0.574890092096664,0.519254429183621,2.09178681227927,0,0,0,0.68888668898764,0.910455840033585,2.62248829918848,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,2.50844886927427,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.103041011647722,0.366277859273374,0.165018999841176,0,0,0,0.676695028044854,0.308097234229289,0.614014698904518,0.964856007391714,0.322260734604821,1.74020032697074,0.340906509664404,0.534192213880424,0,0,0,0,0,0,0,0.308033580176089,0,0,0.74129687641568,0,0,0.632758849437452,0.190630193923825,0.767693373934002,1.28381696410176,0.318203247925937,0.78494864019923,0.179872457583315,0.54907405947211,0.589062011728432,0.808729926293264,0,0,0.975267478179181,1.21856744815642,2.11300293513511,0.545999645631943,1.55545975149084,4.52032466480971,1.10273068709225,1.32687795048244,1.75380354101505,0.578775534266688,0,0,0,1.12678241012897,0.143411352204052,0.196498082026242,0,0.709522128141196,7.38876723541824,2.96365403663912,0,1.04980416073495,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0.921482106297696,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0.0897576444097721,0,1.5950057986596,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.379119477770928,0,0,0,0,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0.0882561266915003,0.90392296312213,0,0,0.0633107959558787,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0.662091970365432,0,2.17199840701485,0,2.61269888087527,0,0.082092520749339,0.511164065356265,0,0,0,0,0,0,0,0.320362237703084,0,0,0.496166021811951,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0.468334905806882,0,0.597019211547496,0.233713309847224,1.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| ||
|short_description=p4@MXRA8 | |||
}} | }} |
Latest revision as of 15:01, 16 September 2015
Short description: | p4@MXRA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MXRA8_5end |
Coexpression cluster: | C1000_Osteoblast_Preadipocyte_Hair_Adipocyte_tenocyte_Mesenchymal_leiomyoma |
Association with transcript: | -236bp_to_ENST00000473097_5end |
EntrezGene: | MXRA8 |
HGNC: | 7542 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.72e-15 | 76 |
fat cell | 4.09e-11 | 15 |
preadipocyte | 8.27e-11 | 12 |
smooth muscle cell of the subclavian artery | 4.18e-10 | 5 |
multi fate stem cell | 1.70e-08 | 427 |
connective tissue cell | 1.90e-08 | 361 |
fibrocyte | 3.35e-08 | 3 |
tendon cell | 3.35e-08 | 3 |
somatic stem cell | 3.76e-08 | 433 |
hair follicle cell | 4.13e-08 | 5 |
stem cell | 1.04e-07 | 441 |
adipocyte of omentum tissue | 1.10e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
articulation | 4.77e-13 | 8 |
skeletal joint | 4.77e-13 | 8 |
articular system | 4.77e-13 | 8 |
intervertebral cartilage | 1.06e-10 | 5 |
symphysis | 1.06e-10 | 5 |
nonsynovial joint | 1.06e-10 | 5 |
fibrous joint | 1.06e-10 | 5 |
cartilaginous joint | 1.06e-10 | 5 |
developing mesenchymal condensation | 1.06e-10 | 5 |
pre-cartilage condensation | 1.06e-10 | 5 |
cartilaginous condensation | 1.06e-10 | 5 |
cartilage element | 1.06e-10 | 5 |
post-cranial axial skeletal system | 1.06e-10 | 5 |
vertebral column | 1.06e-10 | 5 |
intervertebral disk | 1.06e-10 | 5 |
intervertebral joint | 1.06e-10 | 5 |
thoracic segment blood vessel | 4.18e-10 | 5 |
subclavian artery | 4.18e-10 | 5 |
omentum | 3.53e-09 | 6 |
peritoneum | 3.53e-09 | 6 |
abdominal cavity | 3.53e-09 | 6 |
visceral peritoneum | 3.53e-09 | 6 |
cavity lining | 1.60e-08 | 12 |
serous membrane | 1.60e-08 | 12 |
connective tissue | 2.43e-08 | 371 |
dense regular connective tissue | 3.35e-08 | 3 |
tendon | 3.35e-08 | 3 |
regular connective tissue | 3.35e-08 | 3 |
hair follicle | 4.13e-08 | 5 |
hair follicle placode | 4.13e-08 | 5 |
organ component layer | 2.37e-07 | 66 |
integument | 3.76e-07 | 46 |
integumental system | 3.76e-07 | 46 |
adipose tissue | 3.83e-07 | 14 |
trunk blood vessel | 4.08e-07 | 7 |