FFCP PHASE1:Hg19::chr1:47697881..47697910,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:47697881..47697910,- to FFCP PHASE1:Hg19::chr1:47697881..47697910,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6886 | |EntrezGene=6886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11556 | |HGNC=11556 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000464796,uc001cqz.1,uc001cra.1_5end | |||
|cluster_id=chr1:47697881..47697910,- | |||
|coexpression_cluster_id=C3983 | |||
|description=CAGE_peak_4_at_TAL1_5end | |||
|id=chr1:47697881..47697910,- | |||
|ontology_enrichment_celltype=CL:0000115!3.81e-22!35;CL:0002139!5.41e-22!24;CL:0002078!1.23e-16!44;CL:0000071!2.81e-16!18;CL:0002546!2.81e-16!18;CL:0000213!1.88e-11!57;CL:0000215!1.88e-11!57;CL:1000413!2.00e-09!9;CL:0002543!7.63e-08!6;CL:0005020!2.70e-07!6;CL:0002138!2.70e-07!6;CL:0005022!2.70e-07!6;CL:0002544!5.51e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.55e-24;24!CL:0000115;1.43e-22;36!CL:0000071;1.75e-16;18!CL:0002543;3.40e-14;6!CL:0002078;2.07e-11;45!CL:0002138;1.13e-09;6!CL:0000097;1.78e-09;5!CL:0000213;1.75e-08;58!CL:0000215;1.75e-08;58!CL:0002618;5.32e-08;3!CL:0000764;5.68e-07;2!CL:0000558;5.68e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.18e-26,36;CL:0002139,1.02e-24,24;CL:0002078,4.01e-20,45;CL:0000071,1.18e-16,18;CL:0002546,1.18e-16,18;CL:0002543,1.84e-14,6;CL:0000213,2.58e-14,58;CL:0000215,2.58e-14,58;CL:0005020,6.21e-10,6;CL:0002138,6.21e-10,6;CL:0005022,6.21e-10,6;CL:0000763,1.27e-09,108;CL:0000049,1.27e-09,108;CL:0000097,1.79e-09,5;CL:0002028,1.79e-09,5;CL:0002618,4.72e-08,3;CL:0000764,5.62e-07,2;CL:0000765,5.62e-07,2;CL:0000050,5.62e-07,2;CL:0000038,5.62e-07,2;CL:0000558,5.62e-07,2;CL:0000547,5.62e-07,2;CL:0000549,5.62e-07,2;CL:0000550,5.62e-07,2;CL:0000552,5.62e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.75e-16;18!CL:0005022;1.13e-09;6 | |||
|ontology_enrichment_disease=DOID:8692!7.96e-10!31;DOID:1240!1.91e-08!39;DOID:1036!2.01e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.30e-18;31!DOID:1036;3.51e-16;8!DOID:1240;2.12e-12;39!DOID:2531;1.59e-07;51!DOID:0060083;1.59e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.81e-18,31;DOID:1036,3.38e-16,8;DOID:1240,1.67e-15,39;DOID:2531,8.43e-11,51;DOID:0060083,8.43e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-34!115;UBERON:0001986!2.81e-16!18;UBERON:0004638!2.81e-16!18;UBERON:0004852!2.81e-16!18;UBERON:0000178!1.49e-15!15;UBERON:0000179!1.49e-15!15;UBERON:0000463!1.49e-15!15;UBERON:0001009!6.19e-13!113;UBERON:0000487!2.83e-12!22;UBERON:0004535!1.92e-11!110;UBERON:0006914!2.55e-11!25;UBERON:0003915!2.00e-09!9;UBERON:0004700!2.00e-09!9;UBERON:0001917!2.00e-09!9;UBERON:0004111!9.35e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.75e-16;18!UBERON:0001986;1.75e-16;18!UBERON:0004852;1.75e-16;18!UBERON:0000178;2.17e-16;15!UBERON:0000179;2.17e-16;15!UBERON:0000463;2.17e-16;15!UBERON:0000487;5.46e-13;22!UBERON:0006914;4.13e-11;25!UBERON:0002390;2.30e-10;32!UBERON:0002193;2.38e-10;42!UBERON:0001638;3.17e-09;9!UBERON:0003920;3.17e-09;9!UBERON:0004582;3.17e-09;9!UBERON:0000490;3.26e-08;33!UBERON:0001473;3.57e-07;8!UBERON:0004536;3.57e-07;8!UBERON:0006558;3.57e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.18e-16,18;UBERON:0001986,1.18e-16,18;UBERON:0004852,1.18e-16,18;UBERON:0000178,2.83e-16,15;UBERON:0000179,2.83e-16,15;UBERON:0000463,2.83e-16,15;UBERON:0001009,4.79e-14,112;UBERON:0004535,1.56e-13,109;UBERON:0000487,4.00e-13,22;UBERON:0006914,3.16e-11,25;UBERON:0000055,4.84e-10,68;UBERON:0001638,2.14e-09,9;UBERON:0003920,2.14e-09,9;UBERON:0004582,2.14e-09,9;UBERON:0002049,4.00e-08,78;UBERON:0007798,4.00e-08,78;UBERON:0003081,7.17e-08,203;UBERON:0001473,2.32e-07,8;UBERON:0004536,2.32e-07,8;UBERON:0006558,2.32e-07,8 | |||
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| ||
|short_description=p4@TAL1 | |||
}} | }} |
Latest revision as of 09:59, 18 September 2015
Short description: | p4@TAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TAL1_5end |
Coexpression cluster: | C3983_Mast_Reticulocytes_blood_Whole_acute_liver_chronic |
Association with transcript: | 0bp_to_ENST00000464796, uc001cqz.1, uc001cra.1_5end |
EntrezGene: | TAL1 |
HGNC: | 11556 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.18e-26 | 36 |
endothelial cell of vascular tree | 1.02e-24 | 24 |
meso-epithelial cell | 4.01e-20 | 45 |
blood vessel endothelial cell | 1.18e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.18e-16 | 18 |
vein endothelial cell | 1.84e-14 | 6 |
lining cell | 2.58e-14 | 58 |
barrier cell | 2.58e-14 | 58 |
lymphangioblast | 6.21e-10 | 6 |
endothelial cell of lymphatic vessel | 6.21e-10 | 6 |
vascular lymphangioblast | 6.21e-10 | 6 |
myeloid cell | 1.27e-09 | 108 |
common myeloid progenitor | 1.27e-09 | 108 |
mast cell | 1.79e-09 | 5 |
basophil mast progenitor cell | 1.79e-09 | 5 |
endothelial cell of umbilical vein | 4.72e-08 | 3 |
erythroid lineage cell | 5.62e-07 | 2 |
erythroblast | 5.62e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 5.62e-07 | 2 |
erythroid progenitor cell | 5.62e-07 | 2 |
reticulocyte | 5.62e-07 | 2 |
proerythroblast | 5.62e-07 | 2 |
basophilic erythroblast | 5.62e-07 | 2 |
polychromatophilic erythroblast | 5.62e-07 | 2 |
orthochromatic erythroblast | 5.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.18e-16 | 18 |
endothelium | 1.18e-16 | 18 |
cardiovascular system endothelium | 1.18e-16 | 18 |
blood | 2.83e-16 | 15 |
haemolymphatic fluid | 2.83e-16 | 15 |
organism substance | 2.83e-16 | 15 |
circulatory system | 4.79e-14 | 112 |
cardiovascular system | 1.56e-13 | 109 |
simple squamous epithelium | 4.00e-13 | 22 |
squamous epithelium | 3.16e-11 | 25 |
vessel | 4.84e-10 | 68 |
vein | 2.14e-09 | 9 |
venous blood vessel | 2.14e-09 | 9 |
venous system | 2.14e-09 | 9 |
vasculature | 4.00e-08 | 78 |
vascular system | 4.00e-08 | 78 |
lateral plate mesoderm | 7.17e-08 | 203 |
lymphatic vessel | 2.32e-07 | 8 |
lymph vasculature | 2.32e-07 | 8 |
lymphatic part of lymphoid system | 2.32e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.81e-18 | 31 |
chronic leukemia | 3.38e-16 | 8 |
leukemia | 1.67e-15 | 39 |
hematologic cancer | 8.43e-11 | 51 |
immune system cancer | 8.43e-11 | 51 |