FFCP PHASE1:Hg19::chr22:19746969..19746987,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:19746969..19746987,+ to FFCP PHASE1:Hg19::chr22:19746969..19746987,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6899 | |EntrezGene=6899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11592 | |HGNC=11592 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-177bp_to_GU014843_5end | |||
|cluster_id=chr22:19746969..19746987,+ | |||
|description=CAGE_peak_2_at_TBX1_5end | |||
|id=chr22:19746969..19746987,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.71e-18!24;CL:0000115!1.02e-17!35;CL:0002078!7.10e-14!44;CL:0000071!1.52e-10!18;CL:0002546!1.52e-10!18;CL:0005020!3.81e-10!6;CL:0002138!3.81e-10!6;CL:0005022!3.81e-10!6;CL:0000213!4.64e-10!57;CL:0000215!4.64e-10!57;CL:0002368!9.02e-10!13;CL:0002543!2.04e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.55e-18;6!CL:0002139;2.21e-18;24!CL:0000115;1.42e-13;36!CL:0002368;9.63e-13;13!CL:0002078;3.09e-11;45!CL:0000307;8.21e-10;3!CL:0002144;1.05e-09;3!CL:0002202;5.23e-08;9!CL:0002632;5.23e-08;9!CL:0000071;4.53e-07;18!CL:0000213;5.96e-07;58!CL:0000215;5.96e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.39e-18,6;CL:0002138,1.39e-18,6;CL:0005022,1.39e-18,6;CL:0002139,2.13e-18,24;CL:0000115,4.22e-17,36;CL:0002078,1.19e-14,45;CL:0002368,1.05e-12,13;CL:0000213,6.32e-12,58;CL:0000215,6.32e-12,58;CL:0000066,1.06e-10,253;CL:0000068,1.01e-09,3;CL:0000069,1.01e-09,3;CL:0000307,1.01e-09,3;CL:0000377,1.01e-09,3;CL:0002144,1.14e-09,3;CL:0002202,4.86e-08,9;CL:0002632,4.86e-08,9;CL:0000071,4.59e-07,18;CL:0002546,4.59e-07,18 | |||
|ontology_enrichment_development_v019=CL:0005022;1.55e-18;6!CL:0000377;8.21e-10;3!UBERON:0008947;8.97e-08;29!CL:0002546;4.53e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.11e-15!53;UBERON:0001737!7.23e-13!9;UBERON:0001004!1.01e-12!72;UBERON:0001557!2.52e-12!19;UBERON:0000072!1.18e-11!46;UBERON:0008947!4.76e-11!38;UBERON:0003258!4.76e-11!38;UBERON:0001986!1.52e-10!18;UBERON:0004638!1.52e-10!18;UBERON:0004852!1.52e-10!18;UBERON:0002465!2.30e-09!10;UBERON:0000487!5.71e-08!22;UBERON:0006914!6.91e-08!25;UBERON:0000055!2.19e-07!69;UBERON:0000468!2.50e-07!659;UBERON:0001473!2.86e-07!8;UBERON:0004536!2.86e-07!8;UBERON:0006558!2.86e-07!8;UBERON:0002049!7.36e-07!79;UBERON:0007798!7.36e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.73e-19;9!UBERON:0001557;1.73e-19;9!UBERON:0000065;2.93e-14;44!UBERON:0002465;3.80e-14;10!UBERON:0001473;1.09e-13;8!UBERON:0004536;1.09e-13;8!UBERON:0006558;1.09e-13;8!UBERON:0000072;1.21e-12;37!UBERON:0010523;1.05e-09;3!UBERON:0001915;1.05e-09;3!UBERON:0001982;1.05e-09;3!UBERON:0001723;2.32e-09;3!UBERON:0001033;2.32e-09;3!UBERON:0001004;3.07e-08;65!UBERON:0004638;4.53e-07;18!UBERON:0001986;4.53e-07;18!UBERON:0004852;4.53e-07;18!UBERON:0003126;7.49e-07;7!UBERON:0001005;7.49e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.81e-19,9;UBERON:0000065,1.70e-17,54;UBERON:0001557,4.55e-16,19;UBERON:0000072,4.61e-15,47;UBERON:0002465,2.73e-14,10;UBERON:0001473,1.00e-13,8;UBERON:0004536,1.00e-13,8;UBERON:0006558,1.00e-13,8;UBERON:0008947,2.91e-13,38;UBERON:0003258,2.91e-13,38;UBERON:0001004,1.36e-12,74;UBERON:0010523,1.14e-09,3;UBERON:0001915,1.14e-09,3;UBERON:0001982,1.14e-09,3;UBERON:0001723,3.18e-09,3;UBERON:0001033,3.18e-09,3;UBERON:0010056,3.18e-09,3;UBERON:0000055,3.65e-07,68;UBERON:0004638,4.59e-07,18;UBERON:0001986,4.59e-07,18;UBERON:0004852,4.59e-07,18;UBERON:0001041,5.35e-07,87;UBERON:0003126,8.76e-07,7;UBERON:0001005,8.76e-07,7 | |||
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| ||
|short_description=p2@TBX1 | |||
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Latest revision as of 03:33, 19 September 2015
Short description: | p2@TBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -177bp_to_GU014843_5end |
EntrezGene: | TBX1 |
HGNC: | 11592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.39e-18 | 6 |
endothelial cell of lymphatic vessel | 1.39e-18 | 6 |
vascular lymphangioblast | 1.39e-18 | 6 |
endothelial cell of vascular tree | 2.13e-18 | 24 |
endothelial cell | 4.22e-17 | 36 |
meso-epithelial cell | 1.19e-14 | 45 |
respiratory epithelial cell | 1.05e-12 | 13 |
lining cell | 6.32e-12 | 58 |
barrier cell | 6.32e-12 | 58 |
epithelial cell | 1.06e-10 | 253 |
duct epithelial cell | 1.01e-09 | 3 |
branched duct epithelial cell | 1.01e-09 | 3 |
tracheal epithelial cell | 1.01e-09 | 3 |
tracheoblast | 1.01e-09 | 3 |
capillary endothelial cell | 1.14e-09 | 3 |
epithelial cell of tracheobronchial tree | 4.86e-08 | 9 |
epithelial cell of lower respiratory tract | 4.86e-08 | 9 |
blood vessel endothelial cell | 4.59e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.59e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.81e-19 | 9 |
respiratory tract | 1.70e-17 | 54 |
upper respiratory tract | 4.55e-16 | 19 |
segment of respiratory tract | 4.61e-15 | 47 |
lymphoid system | 2.73e-14 | 10 |
lymphatic vessel | 1.00e-13 | 8 |
lymph vasculature | 1.00e-13 | 8 |
lymphatic part of lymphoid system | 1.00e-13 | 8 |
respiratory primordium | 2.91e-13 | 38 |
endoderm of foregut | 2.91e-13 | 38 |
respiratory system | 1.36e-12 | 74 |
microcirculatory vessel | 1.14e-09 | 3 |
endothelium of capillary | 1.14e-09 | 3 |
capillary | 1.14e-09 | 3 |
tongue | 3.18e-09 | 3 |
gustatory system | 3.18e-09 | 3 |
future tongue | 3.18e-09 | 3 |
vessel | 3.65e-07 | 68 |
blood vessel endothelium | 4.59e-07 | 18 |
endothelium | 4.59e-07 | 18 |
cardiovascular system endothelium | 4.59e-07 | 18 |
foregut | 5.35e-07 | 87 |
trachea | 8.76e-07 | 7 |
respiratory airway | 8.76e-07 | 7 |