FFCP PHASE1:Hg19::chr2:113591000..113591005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3553 | |EntrezGene=3553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5992 | |HGNC=5992 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=146bp_to_ENST00000487639_5end | |||
|cluster_id=chr2:113591000..113591005,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_12_at_IL1B_5end | |||
|id=chr2:113591000..113591005,- | |||
|ontology_enrichment_celltype=CL:0002057!2.43e-52!42;CL:0000860!2.24e-48!45;CL:0002194!6.43e-32!63;CL:0000576!6.43e-32!63;CL:0000040!6.43e-32!63;CL:0000559!6.43e-32!63;CL:0002009!9.72e-31!65;CL:0000766!6.45e-30!76;CL:0000839!4.41e-28!70;CL:0000557!1.35e-27!71;CL:0000763!1.43e-19!112;CL:0000049!1.43e-19!112;CL:0000738!9.32e-17!140;CL:0002087!1.58e-16!119;CL:0000037!2.88e-13!172;CL:0000566!2.88e-13!172;CL:0002031!4.95e-13!124;CL:0000988!4.11e-12!182;CL:0002032!5.38e-11!165;CL:0000837!5.38e-11!165;CL:0000034!6.88e-07!444;CL:0002371!9.80e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-70;33!CL:0002057;1.38e-70;33!CL:0000473;3.74e-49;39!CL:0000234;3.74e-49;39!CL:0000576;2.17e-37;48!CL:0000766;5.37e-26;69!CL:0002087;6.86e-15;104!CL:0000763;7.17e-14;100!CL:0002393;7.98e-07;6!CL:0002397;7.98e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.60e-75,42;CL:0002057,3.60e-75,42;CL:0000473,1.92e-65,48;CL:0000234,1.92e-65,48;CL:0002194,8.16e-52,59;CL:0000576,8.16e-52,59;CL:0000040,8.16e-52,59;CL:0000559,8.16e-52,59;CL:0002009,4.69e-50,61;CL:0000766,8.50e-47,72;CL:0000839,4.08e-46,66;CL:0000557,2.13e-45,67;CL:0000763,2.13e-30,108;CL:0000049,2.13e-30,108;CL:0002087,1.92e-25,115;CL:0002031,2.84e-24,120;CL:0000738,1.39e-23,136;CL:0002032,1.75e-19,161;CL:0000837,1.75e-19,161;CL:0000037,1.50e-18,168;CL:0000988,1.85e-17,177;CL:0000134,3.68e-07,354;CL:0000048,4.21e-07,427;CL:0002320,5.87e-07,361;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.67e-52;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.27e-24!80;UBERON:0001474!1.20e-21!86;UBERON:0002390!1.89e-20!102;UBERON:0003061!1.89e-20!102;UBERON:0004765!5.39e-19!101;UBERON:0001434!5.39e-19!101;UBERON:0002193!5.35e-18!112;UBERON:0002204!3.02e-16!167;UBERON:0002405!1.49e-14!115;UBERON:0003081!1.23e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.09e-40,76;UBERON:0001474,1.08e-36,82;UBERON:0004765,3.22e-33,90;UBERON:0002405,4.56e-32,93;UBERON:0002390,2.64e-30,98;UBERON:0003061,2.64e-30,98;UBERON:0001434,1.20e-29,100;UBERON:0002193,2.91e-27,108;UBERON:0002204,7.69e-21,167;UBERON:0003081,1.28e-16,203;UBERON:0000926,1.36e-09,315;UBERON:0004120,1.36e-09,315;UBERON:0006603,1.36e-09,315 | |||
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| ||
|short_description=p12@IL1B | |||
}} | }} |
Latest revision as of 10:46, 16 September 2015
Short description: | p12@IL1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_IL1B_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 146bp_to_ENST00000487639_5end |
EntrezGene: | IL1B |
HGNC: | 5992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.60e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.60e-75 | 42 |
defensive cell | 1.92e-65 | 48 |
phagocyte | 1.92e-65 | 48 |
monopoietic cell | 8.16e-52 | 59 |
monocyte | 8.16e-52 | 59 |
monoblast | 8.16e-52 | 59 |
promonocyte | 8.16e-52 | 59 |
macrophage dendritic cell progenitor | 4.69e-50 | 61 |
myeloid leukocyte | 8.50e-47 | 72 |
myeloid lineage restricted progenitor cell | 4.08e-46 | 66 |
granulocyte monocyte progenitor cell | 2.13e-45 | 67 |
myeloid cell | 2.13e-30 | 108 |
common myeloid progenitor | 2.13e-30 | 108 |
nongranular leukocyte | 1.92e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 2.84e-24 | 120 |
leukocyte | 1.39e-23 | 136 |
hematopoietic oligopotent progenitor cell | 1.75e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.75e-19 | 161 |
hematopoietic stem cell | 1.50e-18 | 168 |
hematopoietic cell | 1.85e-17 | 177 |
mesenchymal cell | 3.68e-07 | 354 |
multi fate stem cell | 4.21e-07 | 427 |
connective tissue cell | 5.87e-07 | 361 |
somatic stem cell | 5.89e-07 | 433 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.09e-40 | 76 |
bone element | 1.08e-36 | 82 |
skeletal element | 3.22e-33 | 90 |
immune system | 4.56e-32 | 93 |
hematopoietic system | 2.64e-30 | 98 |
blood island | 2.64e-30 | 98 |
skeletal system | 1.20e-29 | 100 |
hemolymphoid system | 2.91e-27 | 108 |
musculoskeletal system | 7.69e-21 | 167 |
lateral plate mesoderm | 1.28e-16 | 203 |
mesoderm | 1.36e-09 | 315 |
mesoderm-derived structure | 1.36e-09 | 315 |
presumptive mesoderm | 1.36e-09 | 315 |