FFCP PHASE1:Hg19::chr2:216232618..216232759,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:216232618..216232759,- to FFCP PHASE1:Hg19::chr2:216232618..216232759,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H382,P02751 | |UniProt=Q9H382,P02751 | ||
|association_with_transcript=0bp_to_BT006856,U42456,U42592_5end | |||
|cluster_id=chr2:216232618..216232759,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_12_at_FN1_5end | |||
|id=chr2:216232618..216232759,- | |||
|ontology_enrichment_celltype=CL:0000055!7.13e-35!180;CL:0000057!3.02e-22!75;CL:0000680!3.76e-16!57;CL:0000056!3.76e-16!57;CL:0000355!3.76e-16!57;CL:0000183!2.45e-15!59;CL:0000187!7.78e-15!54;CL:0000393!1.71e-12!60;CL:0000211!1.71e-12!60;CL:0000220!1.21e-11!246;CL:0002321!1.68e-11!248;CL:0002371!1.77e-11!591;CL:0000222!2.67e-11!119;CL:0000192!8.29e-11!42;CL:0000514!8.29e-11!42;CL:0002620!1.08e-09!23;CL:0000144!1.21e-09!625;CL:0000359!1.80e-09!32;CL:0002494!6.07e-08!16;CL:0002334!4.95e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.30e-12;55!CL:0000723;9.20e-11;61!CL:0002620;1.61e-10;23!CL:0000048;5.52e-10;58!CL:0000359;9.36e-10;32!CL:0000057;9.36e-10;73!CL:0000187;9.53e-10;55!CL:0000349;3.89e-09;19!CL:0000192;4.98e-09;43!CL:0002320;1.33e-08;188!CL:0002494;1.40e-08;16!CL:0000034;4.43e-08;69!CL:0002334;1.50e-07;12!CL:0000393;1.58e-07;61!CL:0000211;1.58e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.24e-24,76;CL:0000680,3.24e-18,58;CL:0000056,3.24e-18,58;CL:0000355,3.24e-18,58;CL:0000187,9.20e-17,55;CL:0000393,1.78e-13,61;CL:0000211,1.78e-13,61;CL:0000048,2.58e-13,427;CL:0000723,1.08e-12,433;CL:0000192,2.57e-12,43;CL:0000514,2.57e-12,43;CL:0000034,1.03e-11,441;CL:0000222,4.95e-11,121;CL:0002620,1.76e-10,23;CL:0000359,3.08e-10,32;CL:0002321,3.13e-10,250;CL:0000349,3.39e-09,19;CL:0002494,1.46e-08,16;CL:0002334,1.45e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;6.15e-10;58!CL:0000514;4.98e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.21e-20!143;UBERON:0000914!4.03e-19!83;UBERON:0002329!4.03e-19!83;UBERON:0003077!4.03e-19!83;UBERON:0003059!4.03e-19!83;UBERON:0007282!4.03e-19!83;UBERON:0009618!4.03e-19!83;UBERON:0007285!4.03e-19!83;UBERON:0004290!7.04e-18!70;UBERON:0000486!7.13e-17!82;UBERON:0003914!2.32e-16!118;UBERON:0001134!1.03e-15!61;UBERON:0002036!1.03e-15!61;UBERON:0003082!1.03e-15!61;UBERON:0002385!1.77e-15!63;UBERON:0001015!1.77e-15!63;UBERON:0000383!1.77e-15!63;UBERON:0000490!1.60e-14!138;UBERON:0002100!1.93e-14!216;UBERON:0004872!3.78e-14!84;UBERON:0002049!1.88e-12!79;UBERON:0007798!1.88e-12!79;UBERON:0000468!2.21e-11!659;UBERON:0000475!4.30e-11!365;UBERON:0001637!9.42e-11!42;UBERON:0003509!9.42e-11!42;UBERON:0004572!9.42e-11!42;UBERON:0001009!1.86e-10!113;UBERON:0004535!1.92e-10!110;UBERON:0000055!4.96e-10!69;UBERON:0000119!5.44e-10!312;UBERON:0003104!6.70e-10!238;UBERON:0009142!6.70e-10!238;UBERON:0000483!1.09e-09!309;UBERON:0001981!1.16e-09!60;UBERON:0007500!1.16e-09!60;UBERON:0004537!1.16e-09!60;UBERON:0006965!1.16e-09!60;UBERON:0002199!5.58e-09!45;UBERON:0002416!5.58e-09!45;UBERON:0003102!7.66e-09!95;UBERON:0004573!1.17e-08!33;UBERON:0004571!1.17e-08!33;UBERON:0000948!1.23e-08!24;UBERON:0005498!1.23e-08!24;UBERON:0004140!1.23e-08!24;UBERON:0009881!1.23e-08!24;UBERON:0004141!1.23e-08!24;UBERON:0003084!1.23e-08!24;UBERON:0007005!1.23e-08!24;UBERON:0004139!1.23e-08!24;UBERON:0004291!1.23e-08!24;UBERON:0000481!2.76e-08!347;UBERON:0007100!3.05e-08!27;UBERON:0002097!6.70e-08!40;UBERON:0000467!3.26e-07!625;UBERON:0004923!3.40e-07!57;UBERON:0000480!3.50e-07!626;UBERON:0000926!9.51e-07!448;UBERON:0004120!9.51e-07!448;UBERON:0006603!9.51e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.39e-08;33!UBERON:0004571;1.39e-08;33!UBERON:0001637;1.50e-08;42!UBERON:0003509;1.50e-08;42!UBERON:0004572;1.50e-08;42!UBERON:0002384;3.96e-08;198!UBERON:0000948;4.61e-08;22!UBERON:0002385;1.42e-07;31!UBERON:0001015;1.42e-07;31!UBERON:0000383;1.42e-07;31!UBERON:0000478;2.36e-07;24!UBERON:0007100;3.20e-07;25!UBERON:0002199;5.73e-07;46!UBERON:0002416;5.73e-07;46!UBERON:0002097;6.11e-07;41 | |||
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| ||
|short_description=p12@FN1 | |||
}} | }} |
Latest revision as of 01:52, 20 September 2015
Short description: | p12@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 0bp_to_BT006856, U42456, U42592_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | Q9H382P02751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.24e-24 | 76 |
muscle precursor cell | 3.24e-18 | 58 |
myoblast | 3.24e-18 | 58 |
multi-potent skeletal muscle stem cell | 3.24e-18 | 58 |
muscle cell | 9.20e-17 | 55 |
electrically responsive cell | 1.78e-13 | 61 |
electrically active cell | 1.78e-13 | 61 |
multi fate stem cell | 2.58e-13 | 427 |
somatic stem cell | 1.08e-12 | 433 |
smooth muscle cell | 2.57e-12 | 43 |
smooth muscle myoblast | 2.57e-12 | 43 |
stem cell | 1.03e-11 | 441 |
mesodermal cell | 4.95e-11 | 121 |
skin fibroblast | 1.76e-10 | 23 |
vascular associated smooth muscle cell | 3.08e-10 | 32 |
embryonic cell | 3.13e-10 | 250 |
extraembryonic cell | 3.39e-09 | 19 |
cardiocyte | 1.46e-08 | 16 |
preadipocyte | 1.45e-07 | 12 |