FFCP PHASE1:Hg19::chr2:216236849..216236935,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:216236849..216236935,- to FFCP PHASE1:Hg19::chr2:216236849..216236935,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=226bp_to_ENST00000485567_5end | |||
|cluster_id=chr2:216236849..216236935,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_36_at_FN1_5end | |||
|id=chr2:216236849..216236935,- | |||
|ontology_enrichment_celltype=CL:0000055!1.79e-38!180;CL:0000057!7.91e-25!75;CL:0000680!4.75e-19!57;CL:0000056!4.75e-19!57;CL:0000355!4.75e-19!57;CL:0000187!1.25e-17!54;CL:0000183!1.50e-17!59;CL:0002371!2.31e-16!591;CL:0000393!1.67e-14!60;CL:0000211!1.67e-14!60;CL:0000144!5.36e-14!625;CL:0000222!5.21e-13!119;CL:0000192!5.23e-13!42;CL:0000514!5.23e-13!42;CL:0000220!6.73e-13!246;CL:0002321!2.13e-12!248;CL:0000359!2.71e-11!32;CL:0002620!2.80e-10!23;CL:0000048!4.98e-10!430;CL:0000723!1.40e-09!436;CL:0000034!7.83e-09!444;CL:0000548!8.98e-09!679;CL:0000004!8.98e-09!679;CL:0000255!8.98e-09!679;CL:0002494!9.57e-09!16;CL:0000012!2.84e-08!682;CL:0002334!1.71e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.03e-13;55!CL:0000723;3.71e-12;61!CL:0000187;1.27e-11;55!CL:0000359;1.55e-11;32!CL:0000048;3.45e-11;58!CL:0002620;4.14e-11;23!CL:0000057;1.04e-10;73!CL:0000192;1.32e-10;43!CL:0002494;4.77e-10;16!CL:0002320;2.06e-09;188!CL:0000393;5.06e-09;61!CL:0000211;5.06e-09;61!CL:0000349;9.16e-09;19!CL:0000034;1.05e-08;69!CL:0002334;1.80e-08;12!CL:0000499;2.79e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.03e-27,76;CL:0000680,5.55e-22,58;CL:0000056,5.55e-22,58;CL:0000355,5.55e-22,58;CL:0000048,9.18e-22,427;CL:0000723,2.42e-21,433;CL:0000187,2.62e-20,55;CL:0000034,1.03e-19,441;CL:0000393,2.05e-16,61;CL:0000211,2.05e-16,61;CL:0000192,7.28e-15,43;CL:0000514,7.28e-15,43;CL:0000359,2.30e-12,32;CL:0002620,3.76e-11,23;CL:0000222,3.01e-10,121;CL:0002494,4.73e-10,16;CL:0002320,3.73e-09,361;CL:0002321,5.23e-09,250;CL:0000349,1.28e-08,19;CL:0002334,1.42e-08,12;CL:0000134,9.69e-08,354;CL:0000499,2.52e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;1.57e-11;58!CL:0000514;1.32e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.79e-22!83;UBERON:0002329!8.79e-22!83;UBERON:0003077!8.79e-22!83;UBERON:0003059!8.79e-22!83;UBERON:0007282!8.79e-22!83;UBERON:0009618!8.79e-22!83;UBERON:0007285!8.79e-22!83;UBERON:0004290!3.71e-21!70;UBERON:0000486!1.84e-19!82;UBERON:0005256!4.54e-19!143;UBERON:0001134!9.79e-18!61;UBERON:0002036!9.79e-18!61;UBERON:0003082!9.79e-18!61;UBERON:0002385!1.42e-17!63;UBERON:0001015!1.42e-17!63;UBERON:0000383!1.42e-17!63;UBERON:0004872!1.07e-15!84;UBERON:0002049!1.11e-14!79;UBERON:0007798!1.11e-14!79;UBERON:0000490!1.87e-14!138;UBERON:0003914!4.14e-14!118;UBERON:0002100!8.57e-13!216;UBERON:0004535!1.07e-12!110;UBERON:0001637!1.46e-12!42;UBERON:0003509!1.46e-12!42;UBERON:0004572!1.46e-12!42;UBERON:0001009!2.19e-12!113;UBERON:0000055!1.66e-11!69;UBERON:0001981!5.43e-11!60;UBERON:0007500!5.43e-11!60;UBERON:0004537!5.43e-11!60;UBERON:0006965!5.43e-11!60;UBERON:0002199!2.55e-10!45;UBERON:0002416!2.55e-10!45;UBERON:0002097!6.75e-10!40;UBERON:0003102!8.87e-10!95;UBERON:0004573!9.18e-10!33;UBERON:0004571!9.18e-10!33;UBERON:0000119!9.42e-10!312;UBERON:0000483!2.07e-09!309;UBERON:0004923!5.26e-09!57;UBERON:0000475!1.03e-08!365;UBERON:0000468!1.11e-08!659;UBERON:0000948!1.52e-08!24;UBERON:0005498!1.52e-08!24;UBERON:0004140!1.52e-08!24;UBERON:0009881!1.52e-08!24;UBERON:0004141!1.52e-08!24;UBERON:0003084!1.52e-08!24;UBERON:0007005!1.52e-08!24;UBERON:0004139!1.52e-08!24;UBERON:0004291!1.52e-08!24;UBERON:0003104!6.09e-08!238;UBERON:0009142!6.09e-08!238;UBERON:0007100!1.04e-07!27;UBERON:0005631!7.18e-07!14;UBERON:0000158!7.18e-07!14;UBERON:0000947!7.47e-07!21;UBERON:0010191!7.47e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;6.51e-09;198!UBERON:0001637;7.98e-09;42!UBERON:0003509;7.98e-09;42!UBERON:0004572;7.98e-09;42!UBERON:0002385;1.29e-08;31!UBERON:0001015;1.29e-08;31!UBERON:0000383;1.29e-08;31!UBERON:0004573;1.63e-08;33!UBERON:0004571;1.63e-08;33!UBERON:0002097;1.96e-08;41!UBERON:0000478;2.01e-07;24!UBERON:0002199;2.51e-07;46!UBERON:0002416;2.51e-07;46!UBERON:0000948;3.33e-07;22!UBERON:0004923;5.32e-07;55!UBERON:0005631;8.09e-07;10!UBERON:0000158;8.09e-07;10!UBERON:0000947;8.31e-07;21!UBERON:0010191;8.31e-07;21 | |||
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| ||
|short_description=p36@FN1 | |||
}} | }} |
Latest revision as of 01:57, 20 September 2015
Short description: | p36@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 226bp_to_ENST00000485567_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.03e-27 | 76 |
muscle precursor cell | 5.55e-22 | 58 |
myoblast | 5.55e-22 | 58 |
multi-potent skeletal muscle stem cell | 5.55e-22 | 58 |
multi fate stem cell | 9.18e-22 | 427 |
somatic stem cell | 2.42e-21 | 433 |
muscle cell | 2.62e-20 | 55 |
stem cell | 1.03e-19 | 441 |
electrically responsive cell | 2.05e-16 | 61 |
electrically active cell | 2.05e-16 | 61 |
smooth muscle cell | 7.28e-15 | 43 |
smooth muscle myoblast | 7.28e-15 | 43 |
vascular associated smooth muscle cell | 2.30e-12 | 32 |
skin fibroblast | 3.76e-11 | 23 |
mesodermal cell | 3.01e-10 | 121 |
cardiocyte | 4.73e-10 | 16 |
connective tissue cell | 3.73e-09 | 361 |
embryonic cell | 5.23e-09 | 250 |
extraembryonic cell | 1.28e-08 | 19 |
preadipocyte | 1.42e-08 | 12 |
mesenchymal cell | 9.69e-08 | 354 |
stromal cell | 2.52e-07 | 28 |