FFCP PHASE1:Hg19::chr2:235314156..235314171,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:235314156..235314171,- | |||
|coexpression_cluster_id=C1468 | |||
|description=CAGE_peak_at_chr2:235314156..235314171,- | |||
|id=chr2:235314156..235314171,- | |||
|ontology_enrichment_celltype=CL:0002057!1.87e-61!42;CL:0000860!4.73e-57!45;CL:0002009!2.19e-45!65;CL:0000766!9.68e-42!76;CL:0000738!2.28e-41!140;CL:0000557!3.44e-41!71;CL:0002194!9.63e-39!63;CL:0000576!9.63e-39!63;CL:0000040!9.63e-39!63;CL:0000559!9.63e-39!63;CL:0000839!1.83e-34!70;CL:0002087!2.19e-34!119;CL:0000037!1.28e-32!172;CL:0000566!1.28e-32!172;CL:0000763!4.88e-32!112;CL:0000049!4.88e-32!112;CL:0002393!2.36e-31!9;CL:0002397!2.36e-31!9;CL:0000988!1.64e-30!182;CL:0002031!2.21e-30!124;CL:0002032!1.54e-27!165;CL:0000837!1.54e-27!165;CL:0000767!8.15e-19!3;CL:0000842!3.35e-18!3;CL:0000623!5.87e-17!3;CL:0000825!5.87e-17!3;CL:0000224!8.67e-14!4;CL:0000134!1.17e-13!358;CL:0001014!2.43e-13!2;CL:0001016!2.43e-13!2;CL:0002320!2.82e-13!365;CL:0000219!6.22e-12!390;CL:0000048!2.54e-10!430;CL:0000723!4.30e-10!436;CL:0000034!8.51e-10!444;CL:0000080!2.36e-09!6;CL:0000094!2.42e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000767;1.60e-65;3!CL:0001014;3.57e-45;2!CL:0001016;3.57e-45;2!CL:0002393;7.94e-34;6!CL:0002397;7.94e-34;6!CL:0000094;3.74e-25;8!CL:0000453;9.05e-19;5!CL:0000081;1.63e-18;11!CL:0000840;8.09e-16;5!CL:0000990;7.04e-11;8!CL:0000451;4.52e-09;10!CL:0000766;2.64e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.43e-65,3;CL:0001014,4.00e-45,2;CL:0001016,4.00e-45,2;CL:0000094,3.59e-25,8;CL:0002393,7.49e-23,9;CL:0002397,7.49e-23,9;CL:0000453,9.47e-19,5;CL:0000081,1.58e-18,11;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0000840,8.39e-16,5;CL:0001029,8.39e-16,5;CL:0000766,1.23e-14,72;CL:0002009,7.28e-13,61;CL:0000738,8.37e-13,136;CL:0000557,9.91e-12,67;CL:0000990,7.22e-11,8;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0000451,4.61e-09,10;CL:0000860,8.15e-09,42;CL:0002057,8.15e-09,42;CL:0000473,9.38e-08,48;CL:0000234,9.38e-08,48 | |||
|ontology_enrichment_development_v019=CL:0002057;3.25e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.65e-36!80;UBERON:0002390!1.61e-35!102;UBERON:0003061!1.61e-35!102;UBERON:0001474!3.16e-33!86;UBERON:0002193!6.79e-32!112;UBERON:0004765!1.33e-27!101;UBERON:0001434!1.33e-27!101;UBERON:0002405!1.15e-23!115;UBERON:0002204!8.75e-15!167;UBERON:0003081!5.59e-14!216;UBERON:0002384!9.32e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.34e-10,76;UBERON:0001474,1.32e-09,82;UBERON:0004765,9.34e-09,90;UBERON:0002405,1.79e-08,93;UBERON:0002390,4.84e-08,98;UBERON:0003061,4.84e-08,98;UBERON:0001434,7.01e-08,100;UBERON:0002193,2.70e-07,108 | |||
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|short_description=p@chr2:235314156..235314171,- | |||
}} | }} |
Latest revision as of 08:01, 29 July 2015
Short description: | p@chr2:235314156..235314171, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:235314156..235314171, - |
Coexpression cluster: | C1468_immature_CD14_Basophils_Monocytederived_migratory_Peripheral_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 1.43e-65 | 3 |
CD1a-positive Langerhans cell | 4.00e-45 | 2 |
immature CD1a-positive Langerhans cell | 4.00e-45 | 2 |
granulocyte | 3.59e-25 | 8 |
intermediate monocyte | 7.49e-23 | 9 |
CD14-positive, CD16-positive monocyte | 7.49e-23 | 9 |
Langerhans cell | 9.47e-19 | 5 |
blood cell | 1.58e-18 | 11 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
immature conventional dendritic cell | 8.39e-16 | 5 |
common dendritic progenitor | 8.39e-16 | 5 |
myeloid leukocyte | 1.23e-14 | 72 |
macrophage dendritic cell progenitor | 7.28e-13 | 61 |
leukocyte | 8.37e-13 | 136 |
granulocyte monocyte progenitor cell | 9.91e-12 | 67 |
conventional dendritic cell | 7.22e-11 | 8 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
dendritic cell | 4.61e-09 | 10 |
classical monocyte | 8.15e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.15e-09 | 42 |
defensive cell | 9.38e-08 | 48 |
phagocyte | 9.38e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.34e-10 | 76 |
bone element | 1.32e-09 | 82 |
skeletal element | 9.34e-09 | 90 |
immune system | 1.79e-08 | 93 |
hematopoietic system | 4.84e-08 | 98 |
blood island | 4.84e-08 | 98 |
skeletal system | 7.01e-08 | 100 |
hemolymphoid system | 2.70e-07 | 108 |