FFCP PHASE1:Hg19::chr3:149375091..149375102,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:149375091..149375102,- to FFCP PHASE1:Hg19::chr3:149375091..149375102,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25937 | |EntrezGene=25937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |HGNC=24042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_uc003exe.2_5end | |||
|cluster_id=chr3:149375091..149375102,- | |||
|description=CAGE_peak_9_at_WWTR1_5end | |||
|id=chr3:149375091..149375102,- | |||
|ontology_enrichment_celltype=CL:0002139!3.39e-20!24;CL:0000115!9.88e-17!35;CL:0000071!3.91e-16!18;CL:0002546!3.91e-16!18;CL:0000222!8.78e-13!119;CL:0002078!1.93e-11!44;CL:1000413!7.18e-09!9;CL:0000055!8.78e-09!180;CL:0000213!3.15e-08!57;CL:0000215!3.15e-08!57;CL:0000359!9.99e-08!32;CL:0000680!4.46e-07!57;CL:0000056!4.46e-07!57;CL:0000355!4.46e-07!57;CL:0000136!8.79e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.82e-45;24!CL:0000071;3.12e-41;18!CL:0000115;5.44e-32;36!CL:1000413;2.09e-21;9!CL:0002078;2.36e-19;45!CL:0002544;1.58e-14;6!CL:0002543;1.65e-14;6!CL:0000213;2.18e-14;58!CL:0000215;2.18e-14;58!CL:0000136;1.64e-13;13!CL:0002548;1.13e-09;6!CL:0002144;1.43e-08;3!CL:0002521;3.12e-08;3!CL:0002618;3.87e-08;3!CL:0002494;5.85e-08;16!CL:0002138;7.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.45e-45,24;CL:0000071,8.73e-42,18;CL:0002546,8.73e-42,18;CL:0000115,2.58e-39,36;CL:0002078,7.56e-30,45;CL:1000413,1.12e-21,9;CL:0000213,2.07e-21,58;CL:0000215,2.07e-21,58;CL:0000222,8.38e-18,121;CL:0002543,7.86e-15,6;CL:0002544,8.24e-15,6;CL:0000136,1.83e-11,15;CL:0002548,1.61e-09,6;CL:0002144,1.59e-08,3;CL:0002521,2.47e-08,3;CL:0000076,2.72e-08,63;CL:0002618,3.14e-08,3;CL:0002494,8.22e-08,16 | |||
|ontology_enrichment_development_v019=CL:0002546;3.12e-41;18!CL:0005022;7.65e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.90e-27!69;UBERON:0002049!7.11e-27!79;UBERON:0007798!7.11e-27!79;UBERON:0004872!3.85e-26!84;UBERON:0001981!8.24e-26!60;UBERON:0007500!8.24e-26!60;UBERON:0004537!8.24e-26!60;UBERON:0006965!8.24e-26!60;UBERON:0004535!5.76e-21!110;UBERON:0001009!1.54e-20!113;UBERON:0003914!6.27e-20!118;UBERON:0001637!1.42e-18!42;UBERON:0003509!1.42e-18!42;UBERON:0004572!1.42e-18!42;UBERON:0001986!3.91e-16!18;UBERON:0004638!3.91e-16!18;UBERON:0004852!3.91e-16!18;UBERON:0000025!2.42e-15!194;UBERON:0000477!3.74e-15!286;UBERON:0000487!1.77e-14!22;UBERON:0004111!2.51e-14!241;UBERON:0000490!3.69e-13!138;UBERON:0004573!5.63e-13!33;UBERON:0004571!5.63e-13!33;UBERON:0000119!5.87e-13!312;UBERON:0006914!9.24e-13!25;UBERON:0000483!1.22e-12!309;UBERON:0000468!5.79e-09!659;UBERON:0003915!7.18e-09!9;UBERON:0004700!7.18e-09!9;UBERON:0001917!7.18e-09!9;UBERON:0000467!1.51e-08!625;UBERON:0000480!2.00e-08!626;UBERON:0000947!1.13e-07!21;UBERON:0010191!1.13e-07!21;UBERON:0004290!1.34e-07!70;UBERON:0000948!1.84e-07!24;UBERON:0005498!1.84e-07!24;UBERON:0004140!1.84e-07!24;UBERON:0009881!1.84e-07!24;UBERON:0004141!1.84e-07!24;UBERON:0003084!1.84e-07!24;UBERON:0007005!1.84e-07!24;UBERON:0004139!1.84e-07!24;UBERON:0004291!1.84e-07!24;UBERON:0000475!1.91e-07!365;UBERON:0002100!2.00e-07!216;UBERON:0002385!2.45e-07!63;UBERON:0001015!2.45e-07!63;UBERON:0000383!2.45e-07!63;UBERON:0001134!4.81e-07!61;UBERON:0002036!4.81e-07!61;UBERON:0003082!4.81e-07!61;UBERON:0000481!4.95e-07!347;UBERON:0000922!7.48e-07!612;UBERON:0007100!7.72e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.12e-41;18!UBERON:0001986;3.12e-41;18!UBERON:0004852;3.12e-41;18!UBERON:0000487;9.85e-33;22!UBERON:0006914;3.76e-28;25!UBERON:0003915;2.09e-21;9!UBERON:0004700;2.09e-21;9!UBERON:0001917;2.09e-21;9!UBERON:0007500;2.29e-20;56!UBERON:0001981;2.29e-20;56!UBERON:0004537;2.29e-20;56!UBERON:0000490;1.75e-18;33!UBERON:0000055;5.04e-18;65!UBERON:0001637;6.18e-17;42!UBERON:0003509;6.18e-17;42!UBERON:0004572;6.18e-17;42!UBERON:0002049;6.00e-14;75!UBERON:0007798;6.00e-14;75!UBERON:0003914;1.20e-13;74!UBERON:0004535;1.37e-09;109!UBERON:0004573;1.60e-09;33!UBERON:0004571;1.60e-09;33!UBERON:0001638;2.21e-09;9!UBERON:0003920;2.21e-09;9!UBERON:0004582;2.21e-09;9!UBERON:0000025;1.05e-08;93!UBERON:0010523;1.43e-08;3!UBERON:0001915;1.43e-08;3!UBERON:0001982;1.43e-08;3!UBERON:0002190;3.12e-08;3!UBERON:0001009;6.15e-08;112!UBERON:0000947;1.39e-07;21!UBERON:0010191;1.39e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.73e-42,18;UBERON:0001986,8.73e-42,18;UBERON:0004852,8.73e-42,18;UBERON:0004872,1.43e-36,83;UBERON:0000055,4.66e-36,68;UBERON:0000487,3.54e-33,22;UBERON:0007500,5.62e-33,59;UBERON:0001981,5.62e-33,59;UBERON:0004537,5.62e-33,59;UBERON:0006965,5.62e-33,59;UBERON:0002049,4.43e-32,78;UBERON:0007798,4.43e-32,78;UBERON:0004535,1.14e-28,109;UBERON:0006914,1.55e-28,25;UBERON:0001009,1.44e-27,112;UBERON:0003915,1.12e-21,9;UBERON:0004700,1.12e-21,9;UBERON:0001917,1.12e-21,9;UBERON:0003914,2.94e-21,117;UBERON:0001637,2.38e-19,42;UBERON:0003509,2.38e-19,42;UBERON:0004572,2.38e-19,42;UBERON:0004573,7.61e-11,33;UBERON:0004571,7.61e-11,33;UBERON:0000490,8.22e-11,148;UBERON:0000025,3.84e-10,192;UBERON:0003081,1.17e-09,203;UBERON:0001638,1.37e-09,9;UBERON:0003920,1.37e-09,9;UBERON:0004582,1.37e-09,9;UBERON:0004111,3.84e-09,240;UBERON:0010523,1.59e-08,3;UBERON:0001915,1.59e-08,3;UBERON:0001982,1.59e-08,3;UBERON:0002190,2.47e-08,3;UBERON:0000947,9.91e-08,21;UBERON:0010191,9.91e-08,21;UBERON:0003498,1.50e-07,5;UBERON:0005985,1.50e-07,5;UBERON:0000948,1.97e-07,24;UBERON:0005498,1.97e-07,24;UBERON:0004140,1.97e-07,24;UBERON:0009881,1.97e-07,24;UBERON:0004141,1.97e-07,24;UBERON:0003084,1.97e-07,24;UBERON:0007005,1.97e-07,24;UBERON:0004139,1.97e-07,24;UBERON:0004291,1.97e-07,24;UBERON:0000926,4.18e-07,315;UBERON:0004120,4.18e-07,315;UBERON:0006603,4.18e-07,315 | |||
|phase1_expression=0.726713517082227,4.71021152560163,1.12763523276777,0,3.5756887554183,0.872338524100369,2.53299878168311,2.52687949370732,9.92505387159386,0,0.697801167972428,0,0,0.123766352960047,0,0.672325146451775,0,1.46062018077475,0.487932798790507,0.246242116153576,0,0.626909442956176,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0,0.579386075843295,3.9764297352555,0.486634870302636,0.189069634328136,0.221729397462564,0.790513071238134,0.196468613246569,0,0,0,0,0,0,0,0,6.36039703573456,3.4409383804245,4.16568601929113,6.78369530308812,4.61449379830897,4.12677062910101,3.76190939766259,1.03366703667732,0.71153252537342,3.01248551488203,3.62546385398232,3.04108842287405,12.2031028774085,1.83831540172934,1.62028389576352,2.23249320710199,2.69435247151404,4.72968218029953,6.13266549863533,1.89853131913626,3.84723662253855,0,0,0,0,0.506522046658319,0,0.286836620748814,0.709336764396714,0,2.1349799145941,1.2333377420858,2.17847724779836,2.2900814251847,2.12500474047496,0.605429710579726,2.30470369792,0.234321431833797,0.936480230490962,1.1409436430889,0.597794722207204,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.413303124703062,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.300476117813194,2.38207584636044,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0.18611685633159,0,0.194874010322397,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,1.4763109092493,1.40241773803446,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0.277765335475589,0,0,0,0.579652024875384,0.234817388471643,4.90845922387651,0.925971025153221,4.18559134916116,0,0,0,0,0,0.93733833986777,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0,0,0,0.224262168690721,0,1.10007428731425,0.904902010304444,0,1.690605505112,0,0,0,0,0.799266537048298,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0.616838775210622,0.710246901252508,0.410635780069046,0,0.464841513839837,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,1.29549549661284,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.27470839445503,0.082509499920588,0,0,0,0.48335359146061,0.616194468458578,0.460511024178389,0.137836572484531,0,0.435050081742686,0.426133137080504,0.623224249527161,0,0,0,0,0,0.62962469366128,0,3.08033580176089,1.59691809095107,0.869932992075073,3.89180860118232,1.71749864090389,0,0,0,0.255897791311334,0,0.636406495851874,0.78494864019923,0,0,0.117812402345686,3.23491970517306,1.58510321173008,0.842516912477962,0,0.731140468893853,0,0,0,1.13008116620243,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0.811641507850816,1.8589409885985,0.281695602532241,0,0,1.07001315444375,0.354761064070598,0.422215270595328,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0.568272293612826,0.23874448473769,0,0,0.994147647766298,0,0,0,0.422250816255987,0.19924798825107,0.276283915531148,0,0.306806047506464,0,0,0.179736702294654,0.358042349351218,0,0.887790650732402,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0.1137934482855,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,2.06442582142476,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,0,0,0,0,0.471807930864739,0.802577647298789,0,0,0,1.45668227720456,0,0,0,1.64285107034069,0.150323419414493,0,1.99396161812156,4.30289542638149,2.82539626566503,1.19472429772959,0.569219092059585,1.10939738410511,0,0,0,0,1.0319161948297,0.0967563312890851,0.0730893170861856,0,0.290967049465258,0,0.451961481561065,0.685209623233754,0.19871461170299,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0.288109595976299,0.372757606696298,0,0.271808412147228,0.104602846312333,0.101998217636322,0.288950589901519,0,0.547621515567972,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0.89268582976749,0.403100834920358,0,0,0.472699093843342,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.236417121897595,0.419636705079985,2.00640639386872,0,0.191915197319445,0,0.662091970365432,0.25426853765475,1.62899880526114,0,0,0,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| ||
|short_description=p9@WWTR1 | |||
}} | }} |
Latest revision as of 22:08, 15 September 2015
Short description: | p9@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_WWTR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_uc003exe.2_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.45e-45 | 24 |
blood vessel endothelial cell | 8.73e-42 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.73e-42 | 18 |
endothelial cell | 2.58e-39 | 36 |
meso-epithelial cell | 7.56e-30 | 45 |
endothelial cell of artery | 1.12e-21 | 9 |
lining cell | 2.07e-21 | 58 |
barrier cell | 2.07e-21 | 58 |
mesodermal cell | 8.38e-18 | 121 |
vein endothelial cell | 7.86e-15 | 6 |
aortic endothelial cell | 8.24e-15 | 6 |
fat cell | 1.83e-11 | 15 |
cardiac fibroblast | 1.61e-09 | 6 |
capillary endothelial cell | 1.59e-08 | 3 |
subcutaneous fat cell | 2.47e-08 | 3 |
squamous epithelial cell | 2.72e-08 | 63 |
endothelial cell of umbilical vein | 3.14e-08 | 3 |
cardiocyte | 8.22e-08 | 16 |