FFCP PHASE1:Hg19::chr3:183894655..183894669,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:183894655..183894669,+ to FFCP PHASE1:Hg19::chr3:183894655..183894669,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1173 | |EntrezGene=1173 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=564 | |HGNC=564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_uc003fmy.2_5end | |||
|cluster_id=chr3:183894655..183894669,+ | |||
|description=CAGE_peak_2_at_AP2M1_5end | |||
|id=chr3:183894655..183894669,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.65e-26!119;CL:0000055!2.58e-25!180;CL:0000144!8.27e-20!625;CL:0000213!1.33e-19!57;CL:0000215!1.33e-19!57;CL:0000057!2.14e-17!75;CL:0000548!2.95e-16!679;CL:0000004!2.95e-16!679;CL:0000255!2.95e-16!679;CL:0000012!4.93e-16!682;CL:0002371!1.84e-13!591;CL:0000220!9.50e-13!246;CL:0002321!1.45e-12!248;CL:0000115!1.90e-11!35;CL:0000077!2.66e-10!19;CL:0000680!7.86e-10!57;CL:0000056!7.86e-10!57;CL:0000355!7.86e-10!57;CL:0002078!1.34e-09!44;CL:0000183!3.19e-09!59;CL:0000003!4.25e-09!722;CL:0000187!9.06e-09!54;CL:0002139!9.73e-09!24;CL:0000192!1.98e-08!42;CL:0000514!1.98e-08!42;CL:0000048!2.35e-08!430;CL:0000034!6.18e-08!444;CL:0000723!7.06e-08!436;CL:0000393!1.25e-07!60;CL:0000211!1.25e-07!60;CL:0000071!1.63e-07!18;CL:0002546!1.63e-07!18;CL:0002620!8.23e-07!23;CL:0000076!8.45e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000077;7.77e-13;19!CL:0000213;2.36e-12;58!CL:0000215;2.36e-12;58!CL:0000115;7.52e-10;36!CL:0000071;8.99e-08;18!CL:0002139;1.63e-07;24!CL:0000359;1.76e-07;32!CL:0000192;3.56e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.08e-27,121;CL:0000213,1.31e-21,58;CL:0000215,1.31e-21,58;CL:0000057,1.58e-13,76;CL:0000077,8.87e-13,19;CL:0000115,1.36e-11,36;CL:0002078,1.54e-09,45;CL:0000048,2.12e-09,427;CL:0000192,2.22e-09,43;CL:0000514,2.22e-09,43;CL:0000076,3.55e-09,63;CL:0002321,3.85e-09,250;CL:0000680,4.49e-09,58;CL:0000056,4.49e-09,58;CL:0000355,4.49e-09,58;CL:0000723,8.50e-09,433;CL:0000034,2.60e-08,441;CL:0000187,2.95e-08,55;CL:0000359,4.51e-08,32;CL:0000071,4.56e-08,18;CL:0002546,4.56e-08,18;CL:0002139,8.38e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000222;1.15e-08;121!CL:0002546;8.99e-08;18!CL:0000514;3.56e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.26e-16!79;UBERON:0007798!1.26e-16!79;UBERON:0000055!2.97e-16!69;UBERON:0004872!8.84e-16!84;UBERON:0001981!1.70e-14!60;UBERON:0007500!1.70e-14!60;UBERON:0004537!1.70e-14!60;UBERON:0006965!1.70e-14!60;UBERON:0004535!4.68e-12!110;UBERON:0003914!6.64e-12!118;UBERON:0001009!1.03e-11!113;UBERON:0001637!8.61e-11!42;UBERON:0003509!8.61e-11!42;UBERON:0004572!8.61e-11!42;UBERON:0000490!1.02e-08!138;UBERON:0004573!1.04e-08!33;UBERON:0004571!1.04e-08!33;UBERON:0000914!1.32e-08!83;UBERON:0002329!1.32e-08!83;UBERON:0003077!1.32e-08!83;UBERON:0003059!1.32e-08!83;UBERON:0007282!1.32e-08!83;UBERON:0009618!1.32e-08!83;UBERON:0007285!1.32e-08!83;UBERON:0000947!1.55e-08!21;UBERON:0010191!1.55e-08!21;UBERON:0004290!2.43e-08!70;UBERON:0001134!4.65e-08!61;UBERON:0002036!4.65e-08!61;UBERON:0003082!4.65e-08!61;UBERON:0002385!5.04e-08!63;UBERON:0001015!5.04e-08!63;UBERON:0000383!5.04e-08!63;UBERON:0001986!1.63e-07!18;UBERON:0004638!1.63e-07!18;UBERON:0004852!1.63e-07!18;UBERON:0000487!2.54e-07!22;UBERON:0000926!2.69e-07!448;UBERON:0004120!2.69e-07!448;UBERON:0006603!2.69e-07!448;UBERON:0000486!3.11e-07!82;UBERON:0006914!7.18e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.70e-11;33!UBERON:0004571;1.70e-11;33!UBERON:0001637;1.83e-11;42!UBERON:0003509;1.83e-11;42!UBERON:0004572;1.83e-11;42!UBERON:0000947;7.68e-11;21!UBERON:0010191;7.68e-11;21!UBERON:0007500;1.16e-10;56!UBERON:0001981;1.16e-10;56!UBERON:0004537;1.16e-10;56!UBERON:0000055;7.03e-10;65!UBERON:0003914;6.56e-08;74!UBERON:0004638;8.99e-08;18!UBERON:0001986;8.99e-08;18!UBERON:0004852;8.99e-08;18!UBERON:0000487;1.00e-07;22!UBERON:0006914;4.12e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.60e-18,68;UBERON:0007500,4.39e-17,59;UBERON:0001981,4.39e-17,59;UBERON:0004537,4.39e-17,59;UBERON:0006965,4.39e-17,59;UBERON:0004872,2.79e-16,83;UBERON:0001637,3.44e-15,42;UBERON:0003509,3.44e-15,42;UBERON:0004572,3.44e-15,42;UBERON:0002049,1.54e-14,78;UBERON:0007798,1.54e-14,78;UBERON:0003914,1.33e-12,117;UBERON:0004573,1.33e-12,33;UBERON:0004571,1.33e-12,33;UBERON:0004535,7.32e-12,109;UBERON:0001009,4.06e-11,112;UBERON:0000947,8.10e-11,21;UBERON:0010191,8.10e-11,21;UBERON:0000926,9.37e-10,315;UBERON:0004120,9.37e-10,315;UBERON:0006603,9.37e-10,315;UBERON:0004638,4.56e-08,18;UBERON:0001986,4.56e-08,18;UBERON:0004852,4.56e-08,18;UBERON:0000487,6.45e-08,22;UBERON:0001134,6.82e-08,62;UBERON:0002036,6.82e-08,62;UBERON:0003082,6.82e-08,62;UBERON:0000490,8.32e-08,148;UBERON:0002385,2.28e-07,64;UBERON:0001015,2.28e-07,64;UBERON:0000383,2.28e-07,64;UBERON:0006914,2.76e-07,25;UBERON:0007503,5.94e-07,78;UBERON:0003081,7.94e-07,203 | |||
|phase1_expression=8.3572054464456,1.92690471501885,7.04772020479856,1.0007329835313,1.78784437770915,6.10636966870258,2.53299878168311,1.89515962028049,0.261185628199839,1.22866968250754,0,0,0,0.37129905888014,0.331397375727916,3.36162573225888,2.41077811209591,5.84248072309899,3.41552959153355,0.492484232307152,0.408001382488506,0.940364164434263,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.2848725468772,2.59114932815184,4.37878464978117,0.290796477559129,0.377875943688809,0.727752183563449,0.232429036905685,0.411167888021826,0.929119112685311,0,0.512321413058201,0,0,0,0,0.188242339542605,0.272906150057846,0.674170453335254,0.612167784741805,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.66221330396589,0.361439152384566,2.50668955317945,1.01392563272577,3.1811437882044,0.973269740605272,0.850813354476611,0.665188192387692,0.87834785693126,0.523916301990851,0.364295288292542,0,28.5601706416121,24.0299037472989,15.5560813807072,0,0,0,1.59009925893364,2.58070378531837,1.73570250803797,1.13061588384802,1.25849830862972,2.47606237746061,1.67195973229448,0.775250277507987,0.35576626268671,1.67360306382335,1.20848795132744,6.84244895146661,1.95249646038536,2.57364156242108,3.24056779152704,0.892997282840798,0.44905874525234,0.450445921933289,3.06633274931766,1.89853131913626,1.64881569537367,0,0,0,1.49091585508596,1.13967460498122,3.04541115870403,1.43418310374407,1.77334191099179,1.68203280042692,7.47242970107935,2.96001058100592,1.55605517699883,2.02066008104532,2.45192854670188,0.454072282934794,0,2.57753575017176,0.936480230490962,0.570471821544449,0.747243402759005,0.352303495931295,0.161872944368132,0.140450806702248,1.63323337003915,0.245668634623536,0.723280468230358,0,0.494533858557114,3.64064544775211,2.87447256726495,0.168336113954066,0.250237039743928,0.554128230968366,0.438977620880838,1.22595118319608,1.05166641234618,0.907457465280168,1.79389635688862,0.85422955527427,1.05965950579781,2.70081986475962,0.721367704669072,3.34932702059318,3.35010341396862,3.54430297706659,6.13853132515551,3.78650661366172,1.01254888506529,4.36444353410792,4.26011511019937,3.02256294682921,2.88253006927829,0.966304265816484,0.272746120590835,0.286804595389004,0.365921118388786,0,1.04574548582567,0.518305275076852,0.756962552626885,0.72995471815166,1.56449532329816,0.643240938192885,0,1.85747171212792,1.44375896333917,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,2.95262181849859,2.80483547606892,4.115740113314,2.94017422771084,0,0,0.590789906681404,0,0.122988438543114,1.54411029268673,0.439001141634502,0,0,0.370353780634118,1.3032332212413,0,1.44331342025273,0.463721619900307,1.29149563659404,2.16549671641611,0.925971025153221,1.52203321787679,0,0,14.0343693469816,0,3.71577905721821,0,0.839910640994298,1.55952606966625,0.179117045405697,0,0,0,0.792435906119034,0.414656231081544,0.288239906833923,0.50496973370552,0.253991577168676,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,2.01835951821649,1.74384027533312,0.8800594298514,4.00742318849111,3.57656445851882,0,1.86156681609409,6.24044621468197,1.02882949704857,0,1.0656887160644,0.857867961948885,4.88359444852299,4.11620168390384,0.325736184293735,1.06617584622764,0,9.34462068884717,8.71533458600294,7.99783929456456,1.2162378064119,3.01354254859276,2.10833939483032,2.87549826589899,3.44585807502342,0,4.77778312003011,0.821905290201534,3.04403637507822,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,1.35632511849868,2.70362119990049,2.49800584316026,1.41932173530541,1.17141414992713,0.601892199455438,0,0,1.32845119707087,0.184369168541703,1.56390506042549,1.76221041716467,1.71571711905428,0,0,0,0,0,0.30239029332968,10.9167435440262,2.30192959932094,6.17452207752762,5.50998341799514,9.21073048320066,3.05622450172854,5.93672265779964,0.771048469013278,0.887808626565635,0.98552587216571,0,0.464841513839837,0,0.601519410909855,0.184161977871793,3.78887678943202,1.27463817604702,1.31124414959424,0.451199612907412,1.00119938235739,0,1.46139224653261,0.949964660035881,1.13733384070897,1.87103075804167,1.0795795805107,3.08454505380579,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0.512900250232778,5.9042636225947,1.95227036798582,0.618246069886334,0.27470839445503,0.082509499920588,0,0,3.21367859688319,1.25671933779759,0.616194468458578,0.767518373630648,0.137836572484531,2.0409846524972,0.435050081742686,0.340906509664404,0.178064071293475,0,0,0,0,2.32422774648643,2.51849877464512,0.6970372701606,2.46426864140871,4.25844824253617,0,2.96518750566272,1.71749864090389,0,0.316379424718726,0.953150969619124,0.255897791311334,0.42793898803392,2.22742273548156,2.35484592059769,1.43897966066652,1.64722217841633,1.06031162111118,3.03273722359974,1.58510321173008,0,0.48763373908959,1.46228093778771,0,1.9109987597118,3.81794666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| ||
|short_description=p2@AP2M1 | |||
}} | }} |
Latest revision as of 01:15, 17 September 2015
Short description: | p2@AP2M1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AP2M1_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_uc003fmy.2_5end |
EntrezGene: | AP2M1 |
HGNC: | 564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.08e-27 | 121 |
lining cell | 1.31e-21 | 58 |
barrier cell | 1.31e-21 | 58 |
fibroblast | 1.58e-13 | 76 |
mesothelial cell | 8.87e-13 | 19 |
endothelial cell | 1.36e-11 | 36 |
meso-epithelial cell | 1.54e-09 | 45 |
multi fate stem cell | 2.12e-09 | 427 |
smooth muscle cell | 2.22e-09 | 43 |
smooth muscle myoblast | 2.22e-09 | 43 |
squamous epithelial cell | 3.55e-09 | 63 |
embryonic cell | 3.85e-09 | 250 |
muscle precursor cell | 4.49e-09 | 58 |
myoblast | 4.49e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.49e-09 | 58 |
somatic stem cell | 8.50e-09 | 433 |
stem cell | 2.60e-08 | 441 |
muscle cell | 2.95e-08 | 55 |
vascular associated smooth muscle cell | 4.51e-08 | 32 |
blood vessel endothelial cell | 4.56e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.56e-08 | 18 |
endothelial cell of vascular tree | 8.38e-08 | 24 |