FFCP PHASE1:Hg19::chr3:56207965..56207974,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26059 | |EntrezGene=26059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31922 | |HGNC=31922 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_ENST00000484857_5end | |||
|cluster_id=chr3:56207965..56207974,- | |||
|coexpression_cluster_id=C116 | |||
|description=CAGE_peak_16_at_ERC2_5end | |||
|id=chr3:56207965..56207974,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002092;5.73e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,5.73e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4960!7.98e-10!1;DOID:0070004!7.98e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.23e-66;1!DOID:0070004;1.23e-66;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.23e-66,1;DOID:0070004,1.23e-66,1 | |||
|ontology_enrichment_uberon=UBERON:0001950!7.29e-73!20;UBERON:0001869!2.86e-67!32;UBERON:0002619!2.51e-66!22;UBERON:0001893!2.90e-63!34;UBERON:0002780!1.41e-58!41;UBERON:0001890!1.41e-58!41;UBERON:0006240!1.41e-58!41;UBERON:0000956!2.10e-58!25;UBERON:0000203!2.10e-58!25;UBERON:0002791!1.11e-57!33;UBERON:0003080!3.80e-57!42;UBERON:0002020!5.92e-56!34;UBERON:0003528!5.92e-56!34;UBERON:0000200!6.84e-48!6;UBERON:0000955!9.59e-42!69;UBERON:0006238!9.59e-42!69;UBERON:0001049!1.40e-41!57;UBERON:0005068!1.40e-41!57;UBERON:0006241!1.40e-41!57;UBERON:0007135!1.40e-41!57;UBERON:0002616!4.30e-40!59;UBERON:0003056!1.06e-38!61;UBERON:0001017!1.67e-38!82;UBERON:0005743!1.34e-36!86;UBERON:0001871!5.26e-36!7;UBERON:0000073!6.96e-33!94;UBERON:0001016!6.96e-33!94;UBERON:0007023!4.64e-30!115;UBERON:0003075!6.81e-30!86;UBERON:0007284!6.81e-30!86;UBERON:0002346!1.95e-28!90;UBERON:0001872!6.64e-26!5;UBERON:0002771!4.57e-25!3;UBERON:0000033!8.50e-25!123;UBERON:0000153!1.68e-23!129;UBERON:0007811!1.68e-23!129;UBERON:0001870!1.37e-17!2;UBERON:0004121!5.24e-17!169;UBERON:0000924!1.54e-16!173;UBERON:0006601!1.54e-16!173;UBERON:0000025!4.03e-10!194;UBERON:0002702!8.68e-10!1;UBERON:0002022!1.12e-09!1;UBERON:0003112!1.99e-09!1;UBERON:0000032!1.99e-09!1;UBERON:0005253!1.99e-09!1;UBERON:0003128!1.99e-09!1;UBERON:0002241!1.99e-09!1;UBERON:0001703!1.99e-09!1;UBERON:0004761!1.99e-09!1;UBERON:0009617!1.99e-09!1;UBERON:0001882!2.35e-09!1;UBERON:0005403!2.35e-09!1;UBERON:0007190!3.00e-09!1;UBERON:0002581!4.15e-09!1;UBERON:0000369!8.89e-09!4;UBERON:0002435!8.89e-09!4;UBERON:0000204!8.89e-09!4;UBERON:0010082!8.89e-09!4;UBERON:0002420!1.45e-08!9;UBERON:0007245!1.45e-08!9;UBERON:0010009!1.45e-08!9;UBERON:0010011!1.45e-08!9;UBERON:0000454!1.45e-08!9;UBERON:0004111!1.61e-07!241;UBERON:0000064!1.67e-07!219;UBERON:0000349!1.83e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;1.52e-44;6!UBERON:0002771;5.96e-34;2!UBERON:0002702;5.96e-34;2!UBERON:0001870;3.66e-23;3!UBERON:0001950;1.16e-13;20!UBERON:0002619;1.41e-12;22!UBERON:0000956;2.91e-11;25!UBERON:0000203;2.91e-11;25!UBERON:0001871;9.43e-11;6!UBERON:0003528;2.91e-09;34!UBERON:0002791;2.91e-09;32!UBERON:0002020;2.91e-09;34!UBERON:0001869;2.91e-09;32!UBERON:0001893;1.30e-08;34!UBERON:0002371;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000200,1.52e-44,6;UBERON:0002702,5.04e-34,2;UBERON:0002771,7.05e-34,2;UBERON:0001870,3.27e-23,3;UBERON:0001950,1.16e-13,20;UBERON:0002619,1.41e-12,22;UBERON:0000956,2.91e-11,25;UBERON:0000203,2.91e-11,25;UBERON:0001871,9.89e-11,6;UBERON:0002791,4.11e-09,32;UBERON:0001869,4.11e-09,32;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0001893,1.18e-08,34;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41 | |||
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|short_description=p16@ERC2 | |||
}} | }} |
Latest revision as of 03:32, 19 September 2015
Short description: | p16@ERC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ERC2_5end |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | -38bp_to_ENST00000484857_5end |
EntrezGene: | ERC2 |
HGNC: | 31922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 5.73e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
gyrus | 1.52e-44 | 6 |
middle frontal gyrus | 5.04e-34 | 2 |
middle temporal gyrus | 7.05e-34 | 2 |
frontal cortex | 3.27e-23 | 3 |
neocortex | 1.16e-13 | 20 |
regional part of cerebral cortex | 1.41e-12 | 22 |
cerebral cortex | 2.91e-11 | 25 |
pallium | 2.91e-11 | 25 |
temporal lobe | 9.89e-11 | 6 |
regional part of telencephalon | 4.11e-09 | 32 |
cerebral hemisphere | 4.11e-09 | 32 |
brain grey matter | 1.18e-08 | 34 |
gray matter | 1.18e-08 | 34 |
telencephalon | 1.18e-08 | 34 |
regional part of forebrain | 2.17e-07 | 41 |
forebrain | 2.17e-07 | 41 |
anterior neural tube | 2.17e-07 | 41 |
future forebrain | 2.17e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.23e-66 | 1 |
myeloma | 1.23e-66 | 1 |