FFCP PHASE1:Hg19::chr4:10117812..10117828,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:10117812..10117828,- to FFCP PHASE1:Hg19::chr4:10117812..10117828,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:10117812..10117828,- | |||
|coexpression_cluster_id=C3188 | |||
|description=CAGE_peak_at_chr4:10117812..10117828,- | |||
|id=chr4:10117812..10117828,- | |||
|ontology_enrichment_celltype=CL:0002371!3.36e-19!591;CL:0000144!1.85e-18!625;CL:0000548!1.49e-13!679;CL:0000004!1.49e-13!679;CL:0000255!1.49e-13!679;CL:0000222!2.23e-13!119;CL:0000012!6.67e-13!682;CL:0000003!5.41e-12!722;CL:0002321!8.26e-12!248;CL:0000220!1.14e-11!246;CL:0000034!4.60e-11!444;CL:0000055!5.18e-11!180;CL:0000723!6.33e-11!436;CL:0000048!7.62e-11!430;CL:0000393!8.91e-10!60;CL:0000211!8.91e-10!60;CL:0000192!3.32e-09!42;CL:0000514!3.32e-09!42;CL:0000680!7.07e-09!57;CL:0000056!7.07e-09!57;CL:0000355!7.07e-09!57;CL:0000359!1.80e-08!32;CL:0000187!2.31e-08!54;CL:0000183!2.67e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.46e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.46e-13,121;CL:0002321,4.77e-12,250;CL:0000034,2.15e-11,441;CL:0000048,3.32e-11,427;CL:0000723,3.50e-11,433;CL:0000393,6.12e-10,61;CL:0000211,6.12e-10,61;CL:0000192,3.83e-09,43;CL:0000514,3.83e-09,43;CL:0000680,5.19e-09,58;CL:0000056,5.19e-09,58;CL:0000355,5.19e-09,58;CL:0000187,1.77e-08,55;CL:0000359,2.82e-08,32;CL:0000473,5.52e-07,48;CL:0000234,5.52e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.62e-12!216;UBERON:0001637!1.50e-11!42;UBERON:0003509!1.50e-11!42;UBERON:0004572!1.50e-11!42;UBERON:0002049!2.49e-11!79;UBERON:0007798!2.49e-11!79;UBERON:0001981!5.34e-11!60;UBERON:0007500!5.34e-11!60;UBERON:0004537!5.34e-11!60;UBERON:0006965!5.34e-11!60;UBERON:0001009!8.57e-11!113;UBERON:0000055!9.09e-11!69;UBERON:0004535!1.08e-10!110;UBERON:0003914!4.16e-10!118;UBERON:0000914!8.67e-10!83;UBERON:0002329!8.67e-10!83;UBERON:0003077!8.67e-10!83;UBERON:0003059!8.67e-10!83;UBERON:0007282!8.67e-10!83;UBERON:0009618!8.67e-10!83;UBERON:0007285!8.67e-10!83;UBERON:0004872!1.71e-09!84;UBERON:0000926!2.37e-09!448;UBERON:0004120!2.37e-09!448;UBERON:0006603!2.37e-09!448;UBERON:0002204!4.00e-09!167;UBERON:0004290!4.29e-09!70;UBERON:0005256!6.26e-09!143;UBERON:0004573!2.89e-08!33;UBERON:0004571!2.89e-08!33;UBERON:0000486!6.54e-08!82;UBERON:0001134!2.57e-07!61;UBERON:0002036!2.57e-07!61;UBERON:0003082!2.57e-07!61;UBERON:0002385!3.04e-07!63;UBERON:0001015!3.04e-07!63;UBERON:0000383!3.04e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.71e-08;42!UBERON:0003509;1.71e-08;42!UBERON:0004572;1.71e-08;42!UBERON:0004573;2.43e-07;33!UBERON:0004571;2.43e-07;33!UBERON:0007500;5.91e-07;56!UBERON:0001981;5.91e-07;56!UBERON:0004537;5.91e-07;56!UBERON:0003914;6.52e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,9.08e-14,315;UBERON:0004120,9.08e-14,315;UBERON:0006603,9.08e-14,315;UBERON:0003081,9.84e-12,203;UBERON:0001637,1.44e-11,42;UBERON:0003509,1.44e-11,42;UBERON:0004572,1.44e-11,42;UBERON:0007503,2.96e-11,78;UBERON:0007500,3.35e-11,59;UBERON:0001981,3.35e-11,59;UBERON:0004537,3.35e-11,59;UBERON:0006965,3.35e-11,59;UBERON:0002049,3.52e-11,78;UBERON:0007798,3.52e-11,78;UBERON:0001009,4.30e-11,112;UBERON:0004535,5.34e-11,109;UBERON:0000055,8.90e-11,68;UBERON:0003914,1.07e-10,117;UBERON:0002204,4.35e-10,167;UBERON:0004872,6.38e-10,83;UBERON:0007524,2.19e-09,73;UBERON:0002329,2.43e-09,71;UBERON:0003059,2.43e-09,71;UBERON:0007282,2.43e-09,71;UBERON:0004290,2.43e-09,71;UBERON:0009618,2.43e-09,71;UBERON:0003077,4.14e-09,72;UBERON:0007285,4.14e-09,72;UBERON:0004573,3.56e-08,33;UBERON:0004571,3.56e-08,33;UBERON:0000486,3.59e-08,83;UBERON:0001134,1.69e-07,62;UBERON:0002036,1.69e-07,62;UBERON:0003082,1.69e-07,62;UBERON:0000490,2.16e-07,148;UBERON:0002385,2.19e-07,64;UBERON:0001015,2.19e-07,64;UBERON:0000383,2.19e-07,64;UBERON:0005256,2.49e-07,122 | |||
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| ||
|short_description=p@chr4:10117812..10117828,- | |||
}} | }} |
Latest revision as of 00:22, 30 July 2015
Short description: | p@chr4:10117812..10117828, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:10117812..10117828, - |
Coexpression cluster: | C3188_Smooth_Aortic_Alveolar_leiomyoma_iPS_Fibroblast_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.46e-13 | 121 |
embryonic cell | 4.77e-12 | 250 |
stem cell | 2.15e-11 | 441 |
multi fate stem cell | 3.32e-11 | 427 |
somatic stem cell | 3.50e-11 | 433 |
electrically responsive cell | 6.12e-10 | 61 |
electrically active cell | 6.12e-10 | 61 |
smooth muscle cell | 3.83e-09 | 43 |
smooth muscle myoblast | 3.83e-09 | 43 |
muscle precursor cell | 5.19e-09 | 58 |
myoblast | 5.19e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.19e-09 | 58 |
muscle cell | 1.77e-08 | 55 |
vascular associated smooth muscle cell | 2.82e-08 | 32 |
defensive cell | 5.52e-07 | 48 |
phagocyte | 5.52e-07 | 48 |