FFCP PHASE1:Hg19::chr4:144507245..144507268,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:144507245..144507268,- | |||
|description=CAGE_peak_at_chr4:144507245..144507268,- | |||
|id=chr4:144507245..144507268,- | |||
|ontology_enrichment_celltype=CL:0005020!2.09e-43!6;CL:0002138!2.09e-43!6;CL:0005022!2.09e-43!6;CL:0002139!7.45e-29!24;CL:0002580!8.29e-22!3;CL:0000115!2.90e-19!35;CL:0002078!5.57e-15!44;CL:0002334!9.05e-15!12;CL:0000213!3.52e-11!57;CL:0000215!3.52e-11!57;CL:0002144!5.06e-11!3;CL:0000222!6.83e-11!119;CL:0002581!7.01e-09!1;CL:0002595!5.60e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002144;5.06e-34;3!CL:0002581;5.23e-26;1!CL:0002595;5.44e-21;5!CL:0002138;2.58e-17;6!CL:0002139;6.56e-17;24!CL:0000346;1.67e-09;3!CL:1000428;1.67e-09;3!CL:0002078;1.22e-07;45!CL:0000115;1.25e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,5.51e-34,3;CL:0002581,4.61e-26,1;CL:0002595,5.44e-21,5;CL:0005020,2.81e-17,6;CL:0002138,2.81e-17,6;CL:0005022,2.81e-17,6;CL:0002139,6.98e-17,24;CL:0000115,2.04e-11,36;CL:0000346,1.54e-09,3;CL:1000428,1.54e-09,3;CL:0002078,3.23e-09,45;CL:0000222,1.84e-07,121;CL:0000213,3.11e-07,58;CL:0000215,3.11e-07,58 | |||
|ontology_enrichment_development_v019=CL:0005022;2.58e-17;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!1.83e-32!8;UBERON:0004536!1.83e-32!8;UBERON:0006558!1.83e-32!8;UBERON:0002465!6.83e-26!10;UBERON:0000055!7.09e-21!69;UBERON:0002049!7.21e-18!79;UBERON:0007798!7.21e-18!79;UBERON:0004535!5.10e-12!110;UBERON:0001009!1.27e-11!113;UBERON:0000310!1.47e-11!10;UBERON:0001915!5.06e-11!3;UBERON:0001982!5.06e-11!3;UBERON:0001443!1.59e-10!11;UBERON:0001981!1.93e-08!60;UBERON:0007500!1.93e-08!60;UBERON:0004537!1.93e-08!60;UBERON:0006965!1.93e-08!60;UBERON:0001637!1.24e-07!42;UBERON:0003509!1.24e-07!42;UBERON:0004572!1.24e-07!42;UBERON:0003834!5.60e-07!5;UBERON:0001533!5.60e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.06e-34;3!UBERON:0001915;5.06e-34;3!UBERON:0001982;5.06e-34;3!UBERON:0003834;5.44e-21;5!UBERON:0001533;5.44e-21;5!UBERON:0003513;2.65e-15;7!UBERON:0005406;1.00e-13;2!UBERON:0001473;3.00e-13;8!UBERON:0004536;3.00e-13;8!UBERON:0006558;3.00e-13;8!UBERON:0002465;8.47e-11;10!UBERON:0000412;1.67e-09;3!UBERON:0001992;1.67e-09;3!UBERON:0002049;8.86e-09;75!UBERON:0007798;8.86e-09;75!UBERON:0000055;1.67e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,5.51e-34,3;UBERON:0001915,5.51e-34,3;UBERON:0001982,5.51e-34,3;UBERON:0003834,5.44e-21,5;UBERON:0001533,5.44e-21,5;UBERON:0003513,2.65e-15,7;UBERON:0005406,9.40e-14,2;UBERON:0000055,3.07e-13,68;UBERON:0001473,3.20e-13,8;UBERON:0004536,3.20e-13,8;UBERON:0006558,3.20e-13,8;UBERON:0002049,1.48e-11,78;UBERON:0007798,1.48e-11,78;UBERON:0002465,8.89e-11,10;UBERON:0000412,1.54e-09,3;UBERON:0001992,1.54e-09,3;UBERON:0004535,2.77e-08,109;UBERON:0001009,4.62e-08,112;UBERON:0007500,3.39e-07,59;UBERON:0001981,3.39e-07,59;UBERON:0004537,3.39e-07,59;UBERON:0006965,3.39e-07,59 | |||
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|short_description=p@chr4:144507245..144507268,- | |||
}} | }} |
Latest revision as of 01:59, 30 July 2015
Short description: | p@chr4:144507245..144507268, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:144507245..144507268, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 5.51e-34 | 3 |
perirenal preadipocyte | 4.61e-26 | 1 |
smooth muscle cell of the subclavian artery | 5.44e-21 | 5 |
lymphangioblast | 2.81e-17 | 6 |
endothelial cell of lymphatic vessel | 2.81e-17 | 6 |
vascular lymphangioblast | 2.81e-17 | 6 |
endothelial cell of vascular tree | 6.98e-17 | 24 |
endothelial cell | 2.04e-11 | 36 |
hair follicle dermal papilla cell | 1.54e-09 | 3 |
stem cell of epidermis | 1.54e-09 | 3 |
meso-epithelial cell | 3.23e-09 | 45 |
mesodermal cell | 1.84e-07 | 121 |
lining cell | 3.11e-07 | 58 |
barrier cell | 3.11e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 5.51e-34 | 3 |
endothelium of capillary | 5.51e-34 | 3 |
capillary | 5.51e-34 | 3 |
thoracic segment blood vessel | 5.44e-21 | 5 |
subclavian artery | 5.44e-21 | 5 |
trunk blood vessel | 2.65e-15 | 7 |
perirenal fat | 9.40e-14 | 2 |
vessel | 3.07e-13 | 68 |
lymphatic vessel | 3.20e-13 | 8 |
lymph vasculature | 3.20e-13 | 8 |
lymphatic part of lymphoid system | 3.20e-13 | 8 |
vasculature | 1.48e-11 | 78 |
vascular system | 1.48e-11 | 78 |
lymphoid system | 8.89e-11 | 10 |
dermal papilla | 1.54e-09 | 3 |
papillary layer of dermis | 1.54e-09 | 3 |
cardiovascular system | 2.77e-08 | 109 |
circulatory system | 4.62e-08 | 112 |
epithelial tube open at both ends | 3.39e-07 | 59 |
blood vessel | 3.39e-07 | 59 |
blood vasculature | 3.39e-07 | 59 |
vascular cord | 3.39e-07 | 59 |