FFCP PHASE1:Hg19::chr5:142779999..142780026,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:142779999..142780026,- to FFCP PHASE1:Hg19::chr5:142779999..142780026,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2908 | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |HGNC=7978 | ||
|TSSclassifier=strong | |||
|UniProt=B6ZGU6,F5ATB7,F5ATB8,F1D8N4 | |UniProt=B6ZGU6,F5ATB7,F5ATB8,F1D8N4 | ||
|association_with_transcript=377bp_to_AB307716,AB527290,EU446477,HQ450643,HQ450644,HQ692822_5end | |||
|cluster_id=chr5:142779999..142780026,- | |||
|description=CAGE_peak_20_at_NR3C1_5end | |||
|id=chr5:142779999..142780026,- | |||
|ontology_enrichment_celltype=CL:0002087!5.54e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.23e-15;24!CL:0002032;3.58e-09;1!CL:0000557;3.58e-09;1!CL:0000946;7.26e-09;1!CL:0002568;7.26e-09;1!CL:0000786;7.26e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.27e-15,24;CL:0000826,3.27e-15,24;CL:0002568,5.75e-09,1;CL:0000946,7.27e-09,1;CL:0000786,7.27e-09,1;CL:0000980,7.27e-09,1;CL:0000988,4.61e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.67e-09;1!DOID:0050177;1.67e-09;1!DOID:0050427;1.67e-09;1!DOID:2355;2.60e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.74e-09,1;DOID:0050177,1.74e-09,1;DOID:0050427,1.74e-09,1;DOID:2355,2.82e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.67e-13;10!UBERON:0001282;7.26e-09;1!UBERON:0009842;7.26e-09;1!UBERON:0003704;7.26e-09;1!UBERON:0001171;7.26e-09;1!UBERON:0001172;7.26e-09;1!UBERON:0000478;5.88e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.23e-13,10;UBERON:0000358,7.23e-13,10;UBERON:0000307,7.23e-13,10;UBERON:0000091,7.23e-13,10;UBERON:0000087,7.23e-13,10;UBERON:0007010,7.23e-13,10;UBERON:0007806,7.23e-13,10;UBERON:0008780,7.23e-13,10;UBERON:0005728,7.23e-13,10;UBERON:0001282,1.16e-08,1;UBERON:0009842,1.16e-08,1;UBERON:0003704,1.16e-08,1;UBERON:0001171,1.16e-08,1;UBERON:0001172,1.16e-08,1;UBERON:0000478,5.21e-08,24 | |||
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| ||
|short_description=p20@NR3C1 | |||
}} | }} |
Latest revision as of 07:41, 25 September 2015
Short description: | p20@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NR3C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 377bp_to_AB307716, AB527290, EU446477, HQ450643, HQ450644, HQ692822_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | B6ZGU6F5ATB7F5ATB8F1D8N4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.27e-15 | 24 |
pro-B cell | 3.27e-15 | 24 |
mesenchymal stem cell of Wharton's jelly | 5.75e-09 | 1 |
antibody secreting cell | 7.27e-09 | 1 |
plasma cell | 7.27e-09 | 1 |
plasmablast | 7.27e-09 | 1 |
hematopoietic cell | 4.61e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.23e-13 | 10 |
blastocyst | 7.23e-13 | 10 |
blastula | 7.23e-13 | 10 |
bilaminar disc | 7.23e-13 | 10 |
inner cell mass | 7.23e-13 | 10 |
cleaving embryo | 7.23e-13 | 10 |
connecting stalk | 7.23e-13 | 10 |
inner cell mass derived epiblast | 7.23e-13 | 10 |
extraembryonic mesoderm | 7.23e-13 | 10 |
intralobular bile duct | 1.16e-08 | 1 |
acinus | 1.16e-08 | 1 |
intrahepatic bile duct | 1.16e-08 | 1 |
portal lobule | 1.16e-08 | 1 |
hepatic acinus | 1.16e-08 | 1 |
extraembryonic structure | 5.21e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.74e-09 | 1 |
monogenic disease | 1.74e-09 | 1 |
xeroderma pigmentosum | 1.74e-09 | 1 |
anemia | 2.82e-09 | 1 |