FFCP PHASE1:Hg19::chr5:169760469..169760494,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=257358 | |EntrezGene=257358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=79bp_to_BC093717,BC111994_5end | |||
|cluster_id=chr5:169760469..169760494,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_LOC257358_5end | |||
|id=chr5:169760469..169760494,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.74e-86!42;CL:0000860!5.93e-80!45;CL:0000766!6.08e-76!76;CL:0000738!4.84e-59!140;CL:0002194!5.23e-57!63;CL:0000576!5.23e-57!63;CL:0000040!5.23e-57!63;CL:0000559!5.23e-57!63;CL:0000839!9.17e-57!70;CL:0000557!7.59e-56!71;CL:0002009!5.21e-55!65;CL:0000763!1.78e-53!112;CL:0000049!1.78e-53!112;CL:0000037!3.97e-50!172;CL:0000566!3.97e-50!172;CL:0002032!2.78e-48!165;CL:0000837!2.78e-48!165;CL:0002087!6.21e-47!119;CL:0000988!9.36e-47!182;CL:0002031!2.14e-44!124;CL:0000094!2.28e-20!8;CL:0000134!4.25e-19!358;CL:0002320!1.67e-18!365;CL:0000219!2.05e-16!390;CL:0000081!1.54e-14!11;CL:0000034!5.63e-14!444;CL:0000048!6.54e-14!430;CL:0000723!1.48e-13!436;CL:0000767!8.49e-11!3;CL:0000771!2.22e-08!2;CL:0000063!7.34e-08!578;CL:0002371!2.38e-07!591;CL:0000144!6.49e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.90e-100;33!CL:0002057;1.90e-100;33!CL:0000473;7.98e-70;39!CL:0000234;7.98e-70;39!CL:0000576;1.17e-58;48!CL:0000766;2.05e-36;69!CL:0000763;2.36e-18;100!CL:0002087;4.99e-15;104!CL:0000771;3.38e-13;2!CL:0000738;2.89e-10;136!CL:0002393;7.38e-10;6!CL:0002397;7.38e-10;6!CL:0000094;2.72e-07;8!CL:0000988;7.74e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.60e-109,42;CL:0002057,5.60e-109,42;CL:0000473,9.97e-95,48;CL:0000234,9.97e-95,48;CL:0000766,4.98e-75,72;CL:0002194,9.05e-75,59;CL:0000576,9.05e-75,59;CL:0000040,9.05e-75,59;CL:0000559,9.05e-75,59;CL:0002009,3.41e-72,61;CL:0000839,2.00e-66,66;CL:0000557,2.26e-65,67;CL:0000763,1.70e-48,108;CL:0000049,1.70e-48,108;CL:0000738,3.37e-40,136;CL:0002087,4.89e-39,115;CL:0002031,1.83e-34,120;CL:0000037,1.49e-31,168;CL:0002032,7.37e-31,161;CL:0000837,7.37e-31,161;CL:0000988,1.11e-29,177;CL:0000771,2.81e-13,2;CL:0000134,4.65e-12,354;CL:0002320,1.03e-11,361;CL:0000219,1.70e-10,386;CL:0000034,2.02e-09,441;CL:0000048,5.31e-09,427;CL:0000723,8.54e-09,433;CL:0000094,2.63e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.97e-78;42!CL:0000049;5.35e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.31e-48!80;UBERON:0001474!1.28e-44!86;UBERON:0002390!5.85e-41!102;UBERON:0003061!5.85e-41!102;UBERON:0004765!1.07e-36!101;UBERON:0001434!1.07e-36!101;UBERON:0002193!1.75e-36!112;UBERON:0002405!3.71e-31!115;UBERON:0002204!1.06e-18!167;UBERON:0002384!1.07e-17!375;UBERON:0003081!1.65e-15!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.93e-57,76;UBERON:0001474,1.25e-52,82;UBERON:0004765,1.51e-47,90;UBERON:0002390,1.20e-46,98;UBERON:0003061,1.20e-46,98;UBERON:0002405,7.28e-46,93;UBERON:0001434,2.52e-42,100;UBERON:0002193,6.95e-42,108;UBERON:0002204,2.44e-23,167;UBERON:0003081,7.13e-20,203;UBERON:0002384,3.05e-11,371;UBERON:0000926,7.23e-11,315;UBERON:0004120,7.23e-11,315;UBERON:0006603,7.23e-11,315 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.928896739896456,0,0,0,0,0,0,6.09394949385065,4.21143339687298,2.38711957787437,0,0,0,0.290796477559129,0,0.485168122375632,1.39457422143411,1.6446715520873,1.85823822537062,7.76769459269806,2.81776777182011,11.1146648047635,4.82643953031266,4.51839278508678,4.06279459783025,0.752969358170419,1.63743690034707,0.898893937780338,11.9372718024652,6.73950956859797,15.344091019177,1.31940520074686,3.39088217956774,2.55734850319616,6.09439401120026,2.8369261234557,4.35975574296902,3.51748131359441,6.25779502104242,6.08128765174327,1.81619850790011,3.31449872388808,6.32924774881769,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72571360654893,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@LOC257358 | |||
}} | }} |
Latest revision as of 22:00, 16 September 2015
Short description: | p2@LOC257358 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC257358_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 79bp_to_BC093717, BC111994_5end |
EntrezGene: | LOC257358 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.60e-109 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.60e-109 | 42 |
defensive cell | 9.97e-95 | 48 |
phagocyte | 9.97e-95 | 48 |
myeloid leukocyte | 4.98e-75 | 72 |
monopoietic cell | 9.05e-75 | 59 |
monocyte | 9.05e-75 | 59 |
monoblast | 9.05e-75 | 59 |
promonocyte | 9.05e-75 | 59 |
macrophage dendritic cell progenitor | 3.41e-72 | 61 |
myeloid lineage restricted progenitor cell | 2.00e-66 | 66 |
granulocyte monocyte progenitor cell | 2.26e-65 | 67 |
myeloid cell | 1.70e-48 | 108 |
common myeloid progenitor | 1.70e-48 | 108 |
leukocyte | 3.37e-40 | 136 |
nongranular leukocyte | 4.89e-39 | 115 |
hematopoietic lineage restricted progenitor cell | 1.83e-34 | 120 |
hematopoietic stem cell | 1.49e-31 | 168 |
hematopoietic oligopotent progenitor cell | 7.37e-31 | 161 |
hematopoietic multipotent progenitor cell | 7.37e-31 | 161 |
hematopoietic cell | 1.11e-29 | 177 |
eosinophil | 2.81e-13 | 2 |
mesenchymal cell | 4.65e-12 | 354 |
connective tissue cell | 1.03e-11 | 361 |
motile cell | 1.70e-10 | 386 |
stem cell | 2.02e-09 | 441 |
multi fate stem cell | 5.31e-09 | 427 |
somatic stem cell | 8.54e-09 | 433 |
granulocyte | 2.63e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.93e-57 | 76 |
bone element | 1.25e-52 | 82 |
skeletal element | 1.51e-47 | 90 |
hematopoietic system | 1.20e-46 | 98 |
blood island | 1.20e-46 | 98 |
immune system | 7.28e-46 | 93 |
skeletal system | 2.52e-42 | 100 |
hemolymphoid system | 6.95e-42 | 108 |
musculoskeletal system | 2.44e-23 | 167 |
lateral plate mesoderm | 7.13e-20 | 203 |
connective tissue | 3.05e-11 | 371 |
mesoderm | 7.23e-11 | 315 |
mesoderm-derived structure | 7.23e-11 | 315 |
presumptive mesoderm | 7.23e-11 | 315 |