FFCP PHASE1:Hg19::chr7:115850662..115850674,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:115850662..115850674,+ to FFCP PHASE1:Hg19::chr7:115850662..115850674,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26136 | |EntrezGene=26136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14620 | |HGNC=14620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_ENST00000496871_5end | |||
|cluster_id=chr7:115850662..115850674,+ | |||
|coexpression_cluster_id=C1983 | |||
|description=CAGE_peak_3_at_TES_5end | |||
|id=chr7:115850662..115850674,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.88e-26!42;CL:0000860!7.69e-26!45;CL:0000738!8.78e-21!140;CL:0002087!1.17e-19!119;CL:0002009!9.19e-17!65;CL:0002194!8.72e-16!63;CL:0000576!8.72e-16!63;CL:0000040!8.72e-16!63;CL:0000559!8.72e-16!63;CL:0002031!5.33e-15!124;CL:0000766!2.97e-14!76;CL:0000557!6.09e-13!71;CL:0000839!4.72e-11!70;CL:0000037!8.25e-11!172;CL:0000566!8.25e-11!172;CL:0000988!4.05e-10!182;CL:0002032!5.65e-10!165;CL:0000837!5.65e-10!165;CL:0000063!8.01e-09!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-20;33!CL:0002057;1.27e-20;33!CL:0000576;1.20e-14;48!CL:0000473;3.62e-14;39!CL:0000234;3.62e-14;39!CL:0000766;1.50e-08;69!CL:0002087;1.07e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.22e-27,42;CL:0002057,3.22e-27,42;CL:0000473,1.10e-22,48;CL:0000234,1.10e-22,48;CL:0000738,7.60e-22,136;CL:0002087,2.17e-20,115;CL:0002009,1.94e-17,61;CL:0002194,2.07e-16,59;CL:0000576,2.07e-16,59;CL:0000040,2.07e-16,59;CL:0000559,2.07e-16,59;CL:0002031,8.21e-16,120;CL:0000766,4.78e-15,72;CL:0000557,1.64e-13,67;CL:0000037,7.41e-12,168;CL:0000839,1.09e-11,66;CL:0000988,3.65e-11,177;CL:0002032,5.73e-11,161;CL:0000837,5.73e-11,161;CL:0000763,7.31e-07,108;CL:0000049,7.31e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.65e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.03e-14!112;UBERON:0002390!2.09e-14!102;UBERON:0003061!2.09e-14!102;UBERON:0003081!3.73e-11!216;UBERON:0002371!3.91e-11!80;UBERON:0001474!2.25e-08!86;UBERON:0002405!1.67e-07!115;UBERON:0004765!7.44e-07!101;UBERON:0001434!7.44e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.05e-15,108;UBERON:0002390,2.87e-15,98;UBERON:0003061,2.87e-15,98;UBERON:0002405,8.22e-13,93;UBERON:0003081,6.40e-12,203;UBERON:0002371,9.92e-12,76;UBERON:0004765,1.37e-09,90;UBERON:0000926,1.68e-09,315;UBERON:0004120,1.68e-09,315;UBERON:0006603,1.68e-09,315;UBERON:0001474,6.83e-09,82 | |||
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| ||
|short_description=p3@TES | |||
}} | }} |
Latest revision as of 06:47, 25 September 2015
Short description: | p3@TES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TES_5end |
Coexpression cluster: | C1983_gastric_CD14_squamous_amniotic_myeloma_Placental_Wilms |
Association with transcript: | 47bp_to_ENST00000496871_5end |
EntrezGene: | TES |
HGNC: | 14620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.22e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.22e-27 | 42 |
defensive cell | 1.10e-22 | 48 |
phagocyte | 1.10e-22 | 48 |
leukocyte | 7.60e-22 | 136 |
nongranular leukocyte | 2.17e-20 | 115 |
macrophage dendritic cell progenitor | 1.94e-17 | 61 |
monopoietic cell | 2.07e-16 | 59 |
monocyte | 2.07e-16 | 59 |
monoblast | 2.07e-16 | 59 |
promonocyte | 2.07e-16 | 59 |
hematopoietic lineage restricted progenitor cell | 8.21e-16 | 120 |
myeloid leukocyte | 4.78e-15 | 72 |
granulocyte monocyte progenitor cell | 1.64e-13 | 67 |
hematopoietic stem cell | 7.41e-12 | 168 |
myeloid lineage restricted progenitor cell | 1.09e-11 | 66 |
hematopoietic cell | 3.65e-11 | 177 |
hematopoietic oligopotent progenitor cell | 5.73e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.73e-11 | 161 |
myeloid cell | 7.31e-07 | 108 |
common myeloid progenitor | 7.31e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.05e-15 | 108 |
hematopoietic system | 2.87e-15 | 98 |
blood island | 2.87e-15 | 98 |
immune system | 8.22e-13 | 93 |
lateral plate mesoderm | 6.40e-12 | 203 |
bone marrow | 9.92e-12 | 76 |
skeletal element | 1.37e-09 | 90 |
mesoderm | 1.68e-09 | 315 |
mesoderm-derived structure | 1.68e-09 | 315 |
presumptive mesoderm | 1.68e-09 | 315 |
bone element | 6.83e-09 | 82 |