FFCP PHASE1:Hg19::chr7:40883504..40883519,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:40883504..40883519,+ to FFCP PHASE1:Hg19::chr7:40883504..40883519,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:40883504..40883519,+ | |||
|coexpression_cluster_id=C1136 | |||
|description=CAGE_peak_at_chr7:40883504..40883519,+ | |||
|id=chr7:40883504..40883519,+ | |||
|ontology_enrichment_celltype=CL:0002159!2.56e-21!13;CL:0002076!2.96e-19!43;CL:0000223!2.95e-14!59;CL:0000066!8.40e-13!254;CL:0002368!1.68e-12!13;CL:0000244!3.33e-12!4;CL:0000731!3.33e-12!4;CL:0002621!2.69e-10!3;CL:0002077!4.12e-10!33;CL:0002166!4.19e-10!3;CL:0002251!6.08e-10!21;CL:0000622!1.01e-09!5;CL:0000362!4.09e-09!8;CL:0000068!4.73e-09!3;CL:0000069!4.73e-09!3;CL:0000307!4.73e-09!3;CL:0000377!4.73e-09!3;CL:0002321!1.64e-08!248;CL:0000240!4.01e-08!6;CL:0000311!4.01e-08!6;CL:0000079!4.01e-08!6;CL:0000237!4.01e-08!6;CL:0000036!4.01e-08!6;CL:0000357!4.01e-08!6;CL:0000114!4.01e-08!6;CL:0000154!4.32e-08!6;CL:0000220!4.90e-08!246;CL:0002202!7.83e-08!9;CL:0002632!7.83e-08!9;CL:0000221!4.38e-07!71;CL:0000317!4.55e-07!2;CL:1000448!4.55e-07!2;CL:0002308!4.55e-07!2;CL:0002140!4.55e-07!2;CL:0002327!5.02e-07!4;CL:0000575!7.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.67e-35;14!CL:0002076;7.27e-21;42!CL:0002621;9.13e-21;3!CL:0002166;2.42e-20;3!CL:0000622;3.50e-20;5!CL:0002251;2.55e-19;20!CL:0000154;7.40e-17;6!CL:0000244;8.11e-15;4!CL:0000731;8.11e-15;4!CL:0000317;9.82e-14;2!CL:1000448;9.82e-14;2!CL:0002308;9.82e-14;2!CL:0002140;9.82e-14;2!CL:0000575;3.26e-13;2!CL:0002077;1.73e-12;34!CL:0000362;1.65e-11;9!CL:0000150;2.69e-11;9!CL:0000240;3.88e-10;6!CL:0000311;3.88e-10;6!CL:0000079;3.88e-10;6!CL:0000237;3.88e-10;6!CL:0002328;2.58e-09;3!CL:0002623;4.17e-09;3!CL:0002368;8.49e-08;13!CL:0002336;9.12e-08;1!CL:0002261;9.12e-08;1!CL:0002252;9.12e-08;1!CL:0002170;9.12e-08;1!CL:0000222;1.91e-07;1!CL:0002202;9.54e-07;9!CL:0002632;9.54e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,3.03e-35,14;CL:0002076,6.14e-23,42;CL:0002621,9.16e-21,3;CL:0002166,2.43e-20,3;CL:0000622,5.77e-20,5;CL:0002251,2.50e-19,20;CL:0000223,1.56e-18,58;CL:0000154,1.12e-16,6;CL:0000244,5.84e-15,4;CL:0000731,5.84e-15,4;CL:0000066,1.98e-14,253;CL:0000317,1.12e-13,2;CL:1000448,1.12e-13,2;CL:0002308,1.12e-13,2;CL:0002140,1.12e-13,2;CL:0002077,1.15e-13,34;CL:0000575,2.89e-13,2;CL:0000362,1.89e-11,9;CL:0000150,3.53e-11,9;CL:0000240,4.07e-10,6;CL:0000311,4.07e-10,6;CL:0000079,4.07e-10,6;CL:0000237,4.07e-10,6;CL:0000036,4.07e-10,6;CL:0000357,4.07e-10,6;CL:0000114,4.07e-10,6;CL:0002321,1.08e-09,250;CL:0002328,2.05e-09,3;CL:0002623,5.80e-09,3;CL:0002368,7.69e-08,13;CL:0002336,8.28e-08,1;CL:0002261,8.28e-08,1;CL:0002170,8.28e-08,1;CL:0002252,9.44e-08,1;CL:0000221,7.52e-07,72;CL:0002202,9.45e-07,9;CL:0002632,9.45e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;3.88e-10;6!CL:0000114;3.88e-10;6!CL:0000223;2.96e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;9.12e-08;1!DOID:3149;9.12e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.07e-07,1;DOID:3149,1.07e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001949!2.69e-10!3;UBERON:0001004!3.42e-10!72;UBERON:0000365!9.41e-10!5;UBERON:0003102!8.68e-09!95;UBERON:0005910!4.09e-08!6;UBERON:0004119!1.02e-07!169;UBERON:0000925!1.02e-07!169;UBERON:0006595!1.02e-07!169;UBERON:0001708!1.19e-07!4;UBERON:0001704!1.19e-07!4;UBERON:0002419!4.55e-07!2;UBERON:0007771!4.55e-07!2;UBERON:0003297!4.55e-07!2;UBERON:0001821!4.55e-07!2;UBERON:0003487!4.55e-07!2;UBERON:0001820!4.55e-07!2;UBERON:0005089!4.55e-07!2;UBERON:0005088!4.55e-07!2;UBERON:0001911!5.02e-07!4;UBERON:0005333!5.02e-07!4;UBERON:0008425!5.02e-07!4;UBERON:0005311!5.02e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;9.13e-21;3!UBERON:0000486;5.07e-19;12!UBERON:0001708;2.13e-15;4!UBERON:0008895;2.13e-15;4!UBERON:0002419;9.82e-14;2!UBERON:0007771;9.82e-14;2!UBERON:0003297;9.82e-14;2!UBERON:0001821;9.82e-14;2!UBERON:0003487;9.82e-14;2!UBERON:0001820;9.82e-14;2!UBERON:0011159;2.02e-12;5!UBERON:0003729;2.17e-12;13!UBERON:0000365;5.83e-12;5!UBERON:0000161;1.27e-11;19!UBERON:0000166;1.27e-11;19!UBERON:0000165;2.34e-10;28!UBERON:0005910;4.75e-10;6!UBERON:0010371;1.65e-09;31!UBERON:0004815;2.58e-09;3!UBERON:0002031;2.58e-09;3!UBERON:0003929;3.51e-09;7!UBERON:0005911;4.21e-09;36!UBERON:0003350;4.37e-08;8!UBERON:0001828;4.37e-08;8!UBERON:0000344;5.78e-08;20!UBERON:0004807;3.24e-07;22!UBERON:0000964;4.90e-07;4!UBERON:0010409;4.90e-07;4!UBERON:0001003;6.06e-07;15!UBERON:0007376;6.06e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.16e-21,3;UBERON:0003102,4.17e-17,99;UBERON:0001708,2.14e-15,4;UBERON:0008895,2.14e-15,4;UBERON:0000033,4.24e-14,56;UBERON:0002419,1.12e-13,2;UBERON:0007771,1.12e-13,2;UBERON:0003297,1.12e-13,2;UBERON:0001821,1.12e-13,2;UBERON:0003487,1.12e-13,2;UBERON:0001820,1.12e-13,2;UBERON:0005089,1.12e-13,2;UBERON:0005088,1.12e-13,2;UBERON:0000153,1.64e-12,62;UBERON:0007811,1.64e-12,62;UBERON:0003729,1.73e-12,13;UBERON:0011159,2.02e-12,5;UBERON:0000365,4.49e-12,5;UBERON:0010188,1.98e-10,6;UBERON:0002539,1.98e-10,6;UBERON:0008816,1.98e-10,6;UBERON:0005910,3.83e-10,6;UBERON:0000165,5.60e-10,29;UBERON:0000930,5.60e-10,29;UBERON:0000166,5.84e-10,22;UBERON:0004815,2.05e-09,3;UBERON:0002031,2.05e-09,3;UBERON:0001444,5.09e-09,49;UBERON:0003350,4.38e-08,8;UBERON:0001828,4.38e-08,8;UBERON:0000344,5.01e-08,20;UBERON:0000161,6.91e-08,36;UBERON:0004119,7.01e-08,160;UBERON:0000925,7.01e-08,160;UBERON:0006595,7.01e-08,160;UBERON:0000964,4.61e-07,4;UBERON:0010409,4.61e-07,4;UBERON:0004348,4.61e-07,4;UBERON:0005427,4.61e-07,4;UBERON:0001003,6.56e-07,15;UBERON:0007376,6.56e-07,15;UBERON:0007383,6.56e-07,15;UBERON:0001004,8.39e-07,74 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,2.10844143144775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,23.7710849390855,12.0008293059967,12.0457930063382,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67027254728142,1.1240175325762,0.502644862058154,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3107217385455,3.52762469217605,3.26082723657489,0.895585227028483,0.871901815541886,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,5.81468763879526,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,9.1008434445113,0,0,0,0,0,0,0,0,0,1.81813406897076,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0,2.58303223602738,1.68471475667626,2.21715076768338,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0126081255956,0,0,0,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,1.03608082081518,1.19502933965765,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,2.10844143144775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,23.7710849390855,12.0008293059967,12.0457930063382,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67027254728142,1.1240175325762,0.502644862058154,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3107217385455,3.52762469217605,3.26082723657489,0.895585227028483,0.871901815541886,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,5.81468763879526,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,9.1008434445113,0,0,0,0,0,0,0,0,0,1.81813406897076,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0,2.58303223602738,1.68471475667626,2.21715076768338,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0126081255956,0,0,0,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96295437002051,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0.158013611732727,0,0,0,1.03608082081518,1.19502933965765,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:40883504..40883519,+ | |||
}} | }} |
Latest revision as of 10:00, 31 July 2015
Short description: | p@chr7:40883504..40883519, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:40883504..40883519, + |
Coexpression cluster: | C1136_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_keratoacanthoma_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.07e-07 | 1 |
keratoacanthoma | 1.07e-07 | 1 |