FFCP PHASE1:Hg19::chr8:134582556..134582570,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:134582556..134582570,- to FFCP PHASE1:Hg19::chr8:134582556..134582570,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6482 | |EntrezGene=6482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10862 | |HGNC=10862 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_ENST00000519435_5end | |||
|cluster_id=chr8:134582556..134582570,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_13_at_ST3GAL1_5end | |||
|id=chr8:134582556..134582570,- | |||
|ontology_enrichment_celltype=CL:0002057!1.15e-28!42;CL:0000860!4.88e-28!45;CL:0000766!1.42e-24!76;CL:0000839!1.01e-20!70;CL:0002194!7.38e-20!63;CL:0000576!7.38e-20!63;CL:0000040!7.38e-20!63;CL:0000559!7.38e-20!63;CL:0000557!3.30e-19!71;CL:0002009!9.90e-19!65;CL:0000763!4.80e-15!112;CL:0000049!4.80e-15!112;CL:0000738!2.37e-13!140;CL:0002087!1.03e-11!119;CL:0002031!1.92e-10!124;CL:0000037!3.19e-10!172;CL:0000566!3.19e-10!172;CL:0002393!4.05e-10!9;CL:0002397!4.05e-10!9;CL:0002032!1.13e-09!165;CL:0000837!1.13e-09!165;CL:0000988!1.62e-09!182;CL:0000134!8.37e-08!358;CL:0000048!1.92e-07!430;CL:0002320!2.43e-07!365;CL:0000723!7.10e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.80e-31;33!CL:0002057;9.80e-31;33!CL:0002393;4.83e-30;6!CL:0002397;4.83e-30;6!CL:0000576;3.36e-29;48!CL:0000766;4.14e-23;69!CL:0000094;3.73e-21;8!CL:0000473;3.36e-20;39!CL:0000234;3.36e-20;39!CL:0000081;3.11e-15;11!CL:0000767;7.76e-15;3!CL:0000763;2.18e-12;100!CL:0000771;4.59e-11;2!CL:0002087;3.89e-09;104!CL:0000738;7.26e-08;136!CL:0000226;1.99e-07;3!CL:0000842;1.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.41e-57,42;CL:0002057,9.41e-57,42;CL:0000766,3.22e-50,72;CL:0000473,5.49e-49,48;CL:0000234,5.49e-49,48;CL:0002194,4.11e-38,59;CL:0000576,4.11e-38,59;CL:0000040,4.11e-38,59;CL:0000559,4.11e-38,59;CL:0002009,1.04e-36,61;CL:0000839,1.44e-33,66;CL:0000557,5.39e-33,67;CL:0000763,1.72e-31,108;CL:0000049,1.72e-31,108;CL:0000738,1.10e-27,136;CL:0002393,1.23e-26,9;CL:0002397,1.23e-26,9;CL:0000094,1.97e-21,8;CL:0000037,3.73e-21,168;CL:0002087,9.94e-21,115;CL:0000988,9.67e-20,177;CL:0002032,4.59e-19,161;CL:0000837,4.59e-19,161;CL:0002031,3.34e-16,120;CL:0000081,1.97e-15,11;CL:0000767,4.27e-15,3;CL:0000771,3.50e-11,2;CL:0000134,5.50e-08,354;CL:0002320,1.07e-07,361;CL:0000034,1.52e-07,441;CL:0000048,2.49e-07,427;CL:0000226,2.66e-07,3;CL:0000842,2.66e-07,3;CL:0000723,4.00e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-36;42!CL:0000049;2.34e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.47e-16!80;UBERON:0002193!6.24e-15!112;UBERON:0002390!9.77e-15!102;UBERON:0003061!9.77e-15!102;UBERON:0002405!6.85e-14!115;UBERON:0001474!1.09e-13!86;UBERON:0004765!3.56e-12!101;UBERON:0001434!3.56e-12!101;UBERON:0003081!5.26e-11!216;UBERON:0000926!4.47e-09!448;UBERON:0004120!4.47e-09!448;UBERON:0006603!4.47e-09!448;UBERON:0002204!8.26e-09!167;UBERON:0002384!1.52e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.65e-28,76;UBERON:0001474,4.63e-26,82;UBERON:0002390,2.82e-25,98;UBERON:0003061,2.82e-25,98;UBERON:0004765,2.68e-23,90;UBERON:0002193,1.98e-22,108;UBERON:0002405,2.20e-22,93;UBERON:0001434,1.84e-20,100;UBERON:0002204,1.04e-13,167;UBERON:0003081,1.32e-13,203;UBERON:0002384,2.67e-07,371;UBERON:0000926,2.79e-07,315;UBERON:0004120,2.79e-07,315;UBERON:0006603,2.79e-07,315 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0.229240217243854,0,0,2.36018566109342,1.53531759238885,1.85779347979291,0,0,0,0,0,0,13.2958898047651,21.0571669843649,16.7098370451206,0.447830948479849,0,0,0.726991193897824,0,0.970336244751265,2.09186133215116,0,0.929119112685311,0.28769239232215,0.512321413058201,1.18241114944293,2.06847408441971,0.645484683583826,4.06279459783025,0.376484679085209,0.818718450173537,0.674170453335254,1.83650335422542,1.28371610830437,2.55734850319616,0,0.598390972864896,0,4.93355705668593,3.97169657283798,3.73693349397345,1.00499466102697,0,0.868755378820466,2.42159801053347,3.68277635987565,2.53169909952708,2.5350634357433,4.25208599930087,1.88692780957538,2.13424399178341,1.50176892841506,0.803627933485401,0.570025487482497,1.19350006319454,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0.805658634218294,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0,0,0.25326102332916,0.529636723252875,0.573673241497627,0,0,0,0,0.311211035399766,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0.30648779579902,0,0.226864366320042,0.179389635688862,0,0.211931901159562,0,0,0,0,0.675105328965065,0.292311015483596,0.252433774244115,0,0,0,0.201504196455281,0.169560592310488,0,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0,0,0,0.392442930250692,0.38474715694639,0,0,0,0,2.53510069643662,0.982827216677626,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0.283550194484773,0,0,0,0,0.088048434013226,0.829312462163088,0.144119953416961,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.434343920002738,0,0,0.112085143993527,0.394061520403854,0,0.77005821767849,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,1.03384013061444,3.45142721309787,0.960548020230999,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.764628819135115,1.66215201785745,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0.464845549297286,0.62962469366128,0.6970372701606,0,1.06461206063404,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,1.01091240786658,0,0,0.48763373908959,0.731140468893853,1.05650146756755,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0,0.709522128141196,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0.886860307073351,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0.199579371432817,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0.359473404589307,0.537063524026827,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0.494255755786011,0.522109747527277,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0.150323419414493,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0.34823682632161,1.39781334593624,0,0.0967563312890851,0.146178634172371,0,0.387956065953678,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0.0984274815147488,0.338693328263138,0,0,0,0,0,0,0,0,0,0.551639951094387,0.0524545881349981,0.105600336519406,0.35857467866569,0.191915197319445,0,0,0,0.542999601753713,1.72844298240254,0,0,0,0.851940108927109,0.113312091520126,0.439656701034247,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0.7520696820681,0,0.655745261419609,0,0,0.122026264901963,0,0.573409195690071,0,0.0620964029413835,0,0.124980407962107,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.457680136793847,0.453692771289717,0.466311601748341,0,0.159296767163702,0.899606224327209,0.310525913752519,0.829412415681711,0,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0.464033759878494,0.398095888698616,0.400027764663154,0,0,0,0,0,0.2609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| ||
|short_description=p13@ST3GAL1 | |||
}} | }} |
Latest revision as of 16:24, 16 September 2015
Short description: | p13@ST3GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ST3GAL1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 51bp_to_ENST00000519435_5end |
EntrezGene: | ST3GAL1 |
HGNC: | 10862 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.65e-28 | 76 |
bone element | 4.63e-26 | 82 |
hematopoietic system | 2.82e-25 | 98 |
blood island | 2.82e-25 | 98 |
skeletal element | 2.68e-23 | 90 |
hemolymphoid system | 1.98e-22 | 108 |
immune system | 2.20e-22 | 93 |
skeletal system | 1.84e-20 | 100 |
musculoskeletal system | 1.04e-13 | 167 |
lateral plate mesoderm | 1.32e-13 | 203 |
connective tissue | 2.67e-07 | 371 |
mesoderm | 2.79e-07 | 315 |
mesoderm-derived structure | 2.79e-07 | 315 |
presumptive mesoderm | 2.79e-07 | 315 |