FFCP PHASE1:Hg19::chr8:134582585..134582601,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:134582585..134582601,- to FFCP PHASE1:Hg19::chr8:134582585..134582601,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6482 | |EntrezGene=6482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10862 | |HGNC=10862 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000519435_5end | |||
|cluster_id=chr8:134582585..134582601,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_10_at_ST3GAL1_5end | |||
|id=chr8:134582585..134582601,- | |||
|ontology_enrichment_celltype=CL:0002057!2.79e-25!42;CL:0000860!3.51e-25!45;CL:0000766!2.46e-23!76;CL:0000839!3.56e-20!70;CL:0002194!1.44e-17!63;CL:0000576!1.44e-17!63;CL:0000040!1.44e-17!63;CL:0000559!1.44e-17!63;CL:0000557!2.47e-17!71;CL:0002009!2.13e-16!65;CL:0000763!2.74e-15!112;CL:0000049!2.74e-15!112;CL:0000738!2.41e-11!140;CL:0000988!5.95e-10!182;CL:0000037!4.01e-09!172;CL:0000566!4.01e-09!172;CL:0002087!4.05e-09!119;CL:0002031!4.26e-09!124;CL:0002032!7.32e-09!165;CL:0000837!7.32e-09!165;CL:0000134!1.65e-08!358;CL:0002393!2.91e-08!9;CL:0002397!2.91e-08!9;CL:0002320!6.75e-08!365;CL:0000081!2.67e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.26e-34;33!CL:0002057;6.26e-34;33!CL:0000576;4.92e-30;48!CL:0000766;1.81e-25;69!CL:0000473;4.01e-23;39!CL:0000234;4.01e-23;39!CL:0002393;5.06e-19;6!CL:0002397;5.06e-19;6!CL:0000094;1.79e-18;8!CL:0000081;8.12e-17;11!CL:0000763;1.28e-11;100!CL:0000767;2.44e-10;3!CL:0000226;1.72e-09;3!CL:0000842;1.72e-09;3!CL:0002087;4.87e-08;104!CL:0000771;4.04e-07;2!CL:0000738;5.49e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.41e-57,42;CL:0002057,2.41e-57,42;CL:0000766,8.39e-51,72;CL:0000473,4.19e-49,48;CL:0000234,4.19e-49,48;CL:0000839,9.80e-38,66;CL:0002194,1.40e-37,59;CL:0000576,1.40e-37,59;CL:0000040,1.40e-37,59;CL:0000559,1.40e-37,59;CL:0002009,4.26e-36,61;CL:0000557,1.11e-34,67;CL:0000763,2.24e-32,108;CL:0000049,2.24e-32,108;CL:0000738,7.45e-27,136;CL:0002393,1.88e-21,9;CL:0002397,1.88e-21,9;CL:0000037,6.40e-21,168;CL:0000988,1.76e-20,177;CL:0002087,1.29e-19,115;CL:0000094,1.35e-18,8;CL:0002032,2.13e-18,161;CL:0000837,2.13e-18,161;CL:0002031,5.13e-17,120;CL:0000081,7.99e-17,11;CL:0000767,2.15e-10,3;CL:0000226,1.43e-09,3;CL:0000842,1.43e-09,3;CL:0000134,2.43e-08,354;CL:0002320,5.81e-08,361;CL:0000771,3.83e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;8.94e-41;42!CL:0000049;1.53e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.79e-18!102;UBERON:0003061!8.79e-18!102;UBERON:0002371!3.56e-15!80;UBERON:0002193!9.67e-15!112;UBERON:0001474!6.73e-14!86;UBERON:0003081!1.87e-13!216;UBERON:0002405!6.81e-12!115;UBERON:0004765!3.79e-11!101;UBERON:0001434!3.79e-11!101;UBERON:0000926!1.13e-10!448;UBERON:0004120!1.13e-10!448;UBERON:0006603!1.13e-10!448;UBERON:0002384!7.95e-08!375;UBERON:0002204!1.14e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.29e-29,76;UBERON:0002390,3.49e-28,98;UBERON:0003061,3.49e-28,98;UBERON:0001474,7.42e-27,82;UBERON:0002193,9.95e-25,108;UBERON:0004765,9.51e-24,90;UBERON:0002405,1.01e-22,93;UBERON:0001434,1.45e-20,100;UBERON:0003081,4.49e-14,203;UBERON:0002204,7.08e-11,167;UBERON:0000926,1.72e-08,315;UBERON:0004120,1.72e-08,315;UBERON:0006603,1.72e-08,315;UBERON:0002384,5.21e-08,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0.697801167972428,1.09220686065086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,3.54027849164014,2.68680578668049,5.88301268601089,0,0,0,0,0,0,23.2678071583389,15.0408335602606,12.8036413722353,0.223915474239924,0.647787332037959,0.77272670290256,0,0.377875943688809,0.485168122375632,1.85943229524548,1.23350366406548,0.929119112685311,1.43846196161075,1.7931249457037,1.18241114944293,2.41321976515633,0,5.41705946377367,1.31769637679823,1.63743690034707,1.12361742222542,1.83650335422542,0.962787081228281,3.19668562899521,0.329851300186716,0.997318288108159,0,7.2552309657146,3.40431134814684,0.622822248995575,1.00499466102697,2.08593167368081,0.65156653411535,3.02699751316684,4.05105399586321,3.48108626184973,3.80259515361495,3.82687739937078,1.88692780957538,2.2465726229299,2.85336096398862,1.28580469357664,1.99508920618874,1.19350006319454,0.365328307529268,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,1.32171328579026,5.60508562981536,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0.949265659568129,0,1.31780417436063,11.6334079244498,0,0.496971951695318,0.25326102332916,0.926864265692532,0,0.354668382198357,0,0,0.24666754841716,0.622422070799533,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0,0,0.280901613404497,0.816616685019573,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0.300476117813194,0.340296549480063,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0.772921620136887,0.18611685633159,0.506328996723799,0.0974370051611986,0.504867548488229,0.184099797284599,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0,0,1.56449532329816,0,0,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.330881918197182,0.217879444092406,0,0.269662616320329,0.392442930250692,0,0,1.40241773803446,0.4115740113314,0,1.26755034821831,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0.790204397959275,0,0.492434012174795,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0,0.621984346622316,2.45003920808834,0.75745460055828,0.126995788584338,0.763976851116555,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0.410952645100767,0,0,0.788123040807709,0,0.513372145118994,0,0,0,0,0,0,2.99161459204025,2.48649308061621,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0.391602314925481,0,1.24060815673732,4.31428401637234,1.49418580924822,0.606255142892519,1.66435439510497,0,0,0.306923946576125,0,0,0,0,1.48418066444991,0.462629081407967,0.532685175939381,0.246381468041427,0,0.232420756919918,0,0.200506470303285,0.0920809889358963,0.34444334449382,0.182091168006717,0.131124414959424,0.902399225814824,0.385076685522074,0,0,0,0,0,0,0,0,0,1.78413391131527,2.49322802678617,0.447749509444357,0.657779629937804,1.0457418040996,0,0,0,1.03041011647722,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.127612712494584,0.2023155617111,0,0.31481234683064,0.6970372701606,0.308033580176089,0,1.73986598415015,0.37064843820784,0.286249773483982,0,0,0,0.511795582622668,0,0.318203247925937,0,0.359744915166629,0,0,0.606547444719948,0,0,0,0.487426979262569,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0.35667105148125,1.06428319221179,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,1.41215701165169,0,0,0,0,0,1.52927441428475,0.569647187174163,0,0.822724546172388,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0.144269212976445,0,0,0.399158742865633,0.383010740264733,0.211673582723883,0,0,0.456469358066384,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0.449341755736634,1.07412704805365,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.230850775511391,0.113942055847001,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0.470940769185074,0,0.225595660617181,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0.889563386041866,0.617819694732514,0.522109747527277,0.067401132980677,0,0,0,0.586993856796269,0,2.36750641709634,0,0,0.442306057399416,0.300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| ||
|short_description=p10@ST3GAL1 | |||
}} | }} |
Latest revision as of 16:25, 16 September 2015
Short description: | p10@ST3GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ST3GAL1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 20bp_to_ENST00000519435_5end |
EntrezGene: | ST3GAL1 |
HGNC: | 10862 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.29e-29 | 76 |
hematopoietic system | 3.49e-28 | 98 |
blood island | 3.49e-28 | 98 |
bone element | 7.42e-27 | 82 |
hemolymphoid system | 9.95e-25 | 108 |
skeletal element | 9.51e-24 | 90 |
immune system | 1.01e-22 | 93 |
skeletal system | 1.45e-20 | 100 |
lateral plate mesoderm | 4.49e-14 | 203 |
musculoskeletal system | 7.08e-11 | 167 |
mesoderm | 1.72e-08 | 315 |
mesoderm-derived structure | 1.72e-08 | 315 |
presumptive mesoderm | 1.72e-08 | 315 |
connective tissue | 5.21e-08 | 371 |