FFCP PHASE1:Hg19::chr8:144816303..144816336,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:144816303..144816336,+ to FFCP PHASE1:Hg19::chr8:144816303..144816336,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100128338 | |EntrezGene=100128338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000533004,NR_033849,uc003yzl.1_5end | |||
|cluster_id=chr8:144816303..144816336,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_LOC100128338_5end | |||
|id=chr8:144816303..144816336,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.49e-16!254;CL:0002077!3.07e-08!33;CL:0002076!2.41e-07!43;CL:0000223!5.33e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.35e-11;3!CL:0002077;4.92e-11;34!CL:0002032;2.54e-09;1!CL:0000557;2.54e-09;1!CL:0002159;2.58e-09;14!CL:0000362;1.57e-08;9!CL:0000148;1.00e-07;10!CL:0000312;2.67e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.59e-11,3;CL:0002077,1.43e-10,34;CL:0002159,3.02e-09,14;CL:0000362,1.65e-08,9;CL:0000148,1.36e-07,10;CL:0000541,1.36e-07,10;CL:0000312,3.34e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.54e-09;1 | |||
|ontology_enrichment_disease=DOID:305!1.61e-18!106;DOID:0050687!1.88e-13!143;DOID:14566!6.51e-11!239;DOID:162!8.65e-11!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008947!2.97e-09!38;UBERON:0003258!2.97e-09!38;UBERON:0004119!6.54e-09!169;UBERON:0000925!6.54e-09!169;UBERON:0006595!6.54e-09!169;UBERON:0001007!1.01e-08!155;UBERON:0001555!1.01e-08!155;UBERON:0007026!1.01e-08!155;UBERON:0004921!2.26e-08!129;UBERON:0004185!2.26e-08!129;UBERON:0000065!5.99e-08!53;UBERON:0001004!1.04e-07!72;UBERON:0000077!4.22e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;6.44e-17;2!UBERON:0000473;7.15e-10;8!UBERON:0000998;2.54e-09;1!UBERON:0006868;2.54e-09;1!UBERON:0003135;2.65e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.14e-16,2;UBERON:0000473,5.64e-10,8;UBERON:0000998,1.32e-09,1;UBERON:0006868,1.32e-09,1;UBERON:0003135,2.23e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,6.09052701064364,1.09288586487763,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0.397589304964456,0.348581828608555,0.10366105501537,1.00928340350251,0.36497735907583,0,0,0,0,0,0.591534000199219,0.505754070234305,0.723033089650446,0.55146986366197,1.74303555273925,0.237270619111097,0.674156540800822,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,0,1.09750285408626,1.1240175325762,0.502644862058154,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0.766765358330422,0,0.176096868026452,0,0,0,0.63497894292169,1.14596527667483,1.17217447210047,0,0.205654985406647,0.901029173531752,0.571652865261156,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,0.276242966807689,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0.576570202095319,0.127612712494584,0.50578890427775,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,1.22520107990516,0.185803175125719,0,0,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0.921722292925374,0.223676107892416,0.500547425135725,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0.728163130497081,0,0,0,0,0,0,0,0,0.659215496907038,0,0.398495976502139,0,0.503865495708552,0,0,0,0,0.358042349351218,0.511572370226872,0.295930216910801,0,0,0,0.185536196323703,0,0.520855522170466,0.699679999969566,0,0.568967241427498,0.508507300585533,0.236387681767936,0,0.291604613383254,0,0,0.361789315876224,0,0,0,0,0.32681539055697,0.41827123283581,0.230850775511391,0,0.23056390438806,0.448788222048861,0.54323685961004,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0,0,0.335643173951685,0.569261198172555,0.158936578980379,0.632994193584081,0.163232808159148,0.424059214301822,0.649165919226273,0,0.0884575645033392,0.611030144933625,0.593042257361244,0.494255755786011,0,0.404406797884062,0,0,0,0.586993856796269,0,0.789168805698781,0,0.61214552326098,0,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0.293977192243133,0.261177619741208,0.52418000472609,0,0.19351266257817,0.292357268344742,0.492692742319255,0.193978032976839,0,0.90392296312213,0,0,0.253243183823515,0.391102765469606,0.240476460754601,0,0,0,0.572682980829578,0.171594997861965,0.14405479798815,0,2.35694034616795,0,0,0,0,0.600420288709789,0.410716136675979,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.329663433524666,0.13480708770837,0,0,0,0.408610218334727,0,0.137539436597234,0.415440338029185,0,0,0.182248669974074,0.670869375198532,0.236417121897595,0.524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0.684347351537318,0,0.961086713109252,1.25763444079733,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0.785270481251171,0,0.244052529803926,0,0,0.443716206147409,0.248385611765534,0,0.124980407962107,0,0.285465333544967,0,0,0.724605143054126,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0.226705925512272,0.694567422971502,0,0.179088841081487,0,0.219284049578707,0,0.578742114812744,0,1.02496607435179,0.345430341731199,0,0.138258436151731,0,0,0.327130788511688,0,0,0.422624246717254,0,0.533458648470704,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0.637724760305049,0.123935764259002,0,0,0,0.80057074828547,0,0,0.385375350578757,0,0,0,0.504143392443436,0.276629009856872,0.161475645631851,0,0.392590874004102,0.11796972334774,0.183428598521679,0.462102664601353,0.381382095467167,0,0,0.300841313397029,0,0,0.261906694481422,0,0.295712172434091,0.135075169236789,0,0.2066867965011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| ||
|short_description=p1@LOC100128338 | |||
}} | }} |
Latest revision as of 23:01, 16 September 2015
Short description: | p1@LOC100128338 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100128338_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000533004, NR_033849, uc003yzl.1_5end |
EntrezGene: | LOC100128338 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.59e-11 | 3 |
ecto-epithelial cell | 1.43e-10 | 34 |
general ecto-epithelial cell | 3.02e-09 | 14 |
epidermal cell | 1.65e-08 | 9 |
melanocyte | 1.36e-07 | 10 |
melanoblast | 1.36e-07 | 10 |
keratinocyte | 3.34e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
throat | 1.14e-16 | 2 |
testis | 5.64e-10 | 8 |
seminal vesicle | 1.32e-09 | 1 |
seminal fluid secreting gland | 1.32e-09 | 1 |
male reproductive organ | 2.23e-07 | 11 |