FFCP PHASE1:Hg19::chr8:22409287..22409294,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:22409287..22409294,+ to FFCP PHASE1:Hg19::chr8:22409287..22409294,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10174 | |EntrezGene=10174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30907 | |HGNC=30907 | ||
|TSSclassifier=strong | |||
|UniProt=O60504 | |UniProt=O60504 | ||
|association_with_transcript=36bp_to_NM_005775,uc003xbv.2,uc011kzk.1_5end | |||
|cluster_id=chr8:22409287..22409294,+ | |||
|coexpression_cluster_id=C2923 | |||
|description=CAGE_peak_27_at_SORBS3_5end | |||
|id=chr8:22409287..22409294,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002561;8.28e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,5.31e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.04e-11;4!UBERON:0007284;8.04e-11;4!UBERON:0006965;3.19e-10;2!UBERON:0006603;6.71e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-45!115;UBERON:0001049!1.33e-15!57;UBERON:0005068!1.33e-15!57;UBERON:0006241!1.33e-15!57;UBERON:0007135!1.33e-15!57;UBERON:0003075!5.65e-14!86;UBERON:0007284!5.65e-14!86;UBERON:0002346!9.67e-13!90;UBERON:0002616!1.83e-12!59;UBERON:0002020!3.98e-12!34;UBERON:0003528!3.98e-12!34;UBERON:0001893!9.44e-12!34;UBERON:0003080!1.52e-11!42;UBERON:0002791!2.31e-11!33;UBERON:0005743!6.32e-11!86;UBERON:0002780!1.06e-10!41;UBERON:0001890!1.06e-10!41;UBERON:0006240!1.06e-10!41;UBERON:0000955!1.19e-10!69;UBERON:0006238!1.19e-10!69;UBERON:0000153!1.63e-10!129;UBERON:0007811!1.63e-10!129;UBERON:0001017!1.81e-10!82;UBERON:0001869!2.01e-10!32;UBERON:0000073!1.46e-09!94;UBERON:0001016!1.46e-09!94;UBERON:0000033!1.69e-09!123;UBERON:0000062!1.03e-08!511;UBERON:0002298!1.34e-08!8;UBERON:0003056!1.93e-08!61;UBERON:0000468!2.10e-08!659;UBERON:0004121!5.09e-08!169;UBERON:0000475!5.21e-08!365;UBERON:0000924!1.74e-07!173;UBERON:0006601!1.74e-07!173;UBERON:0000956!1.90e-07!25;UBERON:0000203!1.90e-07!25;UBERON:0002619!4.38e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.88e-14;3!UBERON:0000946;2.88e-14;3!UBERON:0002081;9.26e-11;2!UBERON:0005090;3.19e-10;2!UBERON:0001630;3.19e-10;2!UBERON:0002133;3.19e-10;2!UBERON:0005933;8.28e-10;2!UBERON:0005942;8.28e-10;2!UBERON:0005932;8.28e-10;2!UBERON:0004151;1.96e-07;3!UBERON:0001896;3.62e-07;3!UBERON:0005290;3.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.80e-14,3;UBERON:0009751,1.80e-14,3;UBERON:0000946,1.80e-14,3;UBERON:0002523,1.80e-14,3;UBERON:0005983,1.80e-14,3;UBERON:0002165,1.80e-14,3;UBERON:0002062,1.80e-14,3;UBERON:0007280,1.80e-14,3;UBERON:0007023,1.30e-12,114;UBERON:0002081,1.10e-10,2;UBERON:0010227,1.10e-10,2;UBERON:0002133,3.07e-10,2;UBERON:0005090,3.36e-10,2;UBERON:0001630,3.36e-10,2;UBERON:0005933,5.31e-10,2;UBERON:0005942,5.31e-10,2;UBERON:0005932,5.31e-10,2;UBERON:0004151,2.19e-07,3;UBERON:0001896,5.00e-07,3;UBERON:0005290,5.00e-07,3;UBERON:0010096,5.00e-07,3 | |||
|phase1_expression=1.2717486548939,0.642301571672949,2.11431606143957,0,0,0,0,0,0.522371256399677,0,0,0,0,0.990130823680373,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0.32389366601898,1.54545340580512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.722878304769133,0.50133791063589,0,0,0.486634870302636,0,0,0,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,2.47981874821837,0,1.23633464639278,0,0,0,0,0,0,0,1.65261864797256,0,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0.184099797284599,0.484938170456436,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,7.15312891703765,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0.958499421966331,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0,0,0.178428988797162,0,0,0.300946099727719,0,1.03473071292505,0,0,0.695068915744663,0.979005787313703,0.343143423810856,0.206768026122887,0.215714200818617,0,0,0,0,0,0.153461973288062,0.280660094433074,0.896974044789907,0,0.160853921143607,0,0,0,0,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,1.05553817648832,0.658589785919804,0.379473173765715,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3441308683503,0,0,0,0,0,0,0,1.1253553312841,0,0,0,2.98871982376605,0,0,0,0,0,0.0898683511473268,0,0,1.28236427328014,0,0,0,0.463840490809256,1.99613798001194,0,0,2.89999830173917,0,0,0,0,0,0.173624994933292,0,0.723578631752448,0,0.110579259931225,0.295547618953547,0.87754158861589,0,0,1.46205491157214,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,1.83309043480088,0,0.123563938946503,0,0.404406797884062,2.40773294189637,0,0,0,0,0,0,0,1.39010475182674,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.775912131907355,0,1.12990370390266,0,0,0.633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,1.39641200636127,1.60412296808179,2.15361907373044,0.599037001496973,0.858452096273142,0.446342914883745,0.53746777989381,0,0,0,0,0.0674035438541849,0,0,0.795229689809303,1.0896272488926,0,0,0,0.2249738915515,0,0.425246896606173,0,0.236417121897595,0.367182116944987,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.52893040697076,0,0,0.213574825135389,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.244052529803926,1.001527445652,4.0138643698305,0.332787154610557,1.1177352529449,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,1.77962244319307,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.478901577171454,0,0.252071696221718,0.345786262321089,1.13032951942296,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.82731361184183,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.413373593002368,0,0,0,2.48105589194647,0,0,0,0.672567444437648,0,0,0.443511850813194,0,0,0.203909198930495,0.197318320688547,0,0,0.863424021355654,0.471346769748006,0,0.913158720509496,0,0,0.78624198594322,0,0,0.173858272302579,0,0,0.51215543128185,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,1.29485767437579,1.33461648913121,1.1598144313382,0.971421986118279,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.785233868459781,0.891139200981258,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0.458729283404541,0.716697915757256,0,0.543931921527318,0,0.5290268405154,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.606229585745915,0,0,0.724030971033267,0.852935927603924,0.23806443146374,0.0645889098360061,0.124149428591716,0,0.509177266225319,1.0105859447911,0.653150243690884,1.71116650542641,0.26940821205835,0.932388670104793,0.665320713092027,0,0,0,0,0,0.488965776731466,1.62758471326295,2.66302709674205,1.20764276154616,0 | 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| ||
|short_description=p27@SORBS3 | |||
}} | }} |
Latest revision as of 11:17, 17 September 2015
Short description: | p27@SORBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_SORBS3_5end |
Coexpression cluster: | C2923_Mesenchymal_Multipotent_aorta_vagina_penis_breast_Fibroblast |
Association with transcript: | 36bp_to_NM_005775, uc003xbv.2, uc011kzk.1_5end |
EntrezGene: | SORBS3 |
HGNC: | 30907 |
UniProt: | O60504 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 5.31e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
valve | 1.80e-14 | 3 |
cardiac mesenchyme | 1.80e-14 | 3 |
cardial valve | 1.80e-14 | 3 |
tunica intima | 1.80e-14 | 3 |
heart layer | 1.80e-14 | 3 |
endocardium | 1.80e-14 | 3 |
endocardial cushion | 1.80e-14 | 3 |
presumptive endocardium | 1.80e-14 | 3 |
adult organism | 1.30e-12 | 114 |
cardiac atrium | 1.10e-10 | 2 |
future cardiac atrium | 1.10e-10 | 2 |
atrioventricular valve | 3.07e-10 | 2 |
muscle structure | 3.36e-10 | 2 |
muscle organ | 3.36e-10 | 2 |
hair root sheath | 5.31e-10 | 2 |
hair outer root sheath | 5.31e-10 | 2 |
bulb of hair follicle | 5.31e-10 | 2 |
cardiac chamber | 2.19e-07 | 3 |
medulla oblongata | 5.00e-07 | 3 |
myelencephalon | 5.00e-07 | 3 |
future myelencephalon | 5.00e-07 | 3 |