FFCP PHASE1:Hg19::chr9:131873659..131873703,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:131873659..131873703,+ to FFCP PHASE1:Hg19::chr9:131873659..131873703,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5524 | |EntrezGene=5524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9308 | |HGNC=9308 | ||
|TSSclassifier=strong | |||
|UniProt=Q68CR8,Q5T948,B4DZF8 | |UniProt=Q68CR8,Q5T948,B4DZF8 | ||
|association_with_transcript=0bp_to_ENST00000347048,ENST00000355007,ENST00000357197,ENST00000445241,ENST00000452489_5end | |||
|cluster_id=chr9:131873659..131873703,+ | |||
|coexpression_cluster_id=C1671 | |||
|description=CAGE_peak_1_at_PPP2R4_5end | |||
|id=chr9:131873659..131873703,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.43e-24!248;CL:0000220!9.20e-24!246;CL:0000222!7.86e-20!119;CL:0000055!1.07e-14!180;CL:0000183!5.18e-14!59;CL:0000192!1.55e-12!42;CL:0000514!1.55e-12!42;CL:0000393!4.90e-12!60;CL:0000211!4.90e-12!60;CL:0000187!2.03e-11!54;CL:0000680!1.02e-10!57;CL:0000056!1.02e-10!57;CL:0000355!1.02e-10!57;CL:0000359!1.49e-10!32;CL:0000066!1.05e-09!254;CL:0000213!1.60e-08!57;CL:0000215!1.60e-08!57;CL:1000449!7.69e-08!16;CL:0000144!1.16e-07!625;CL:0000548!3.07e-07!679;CL:0000004!3.07e-07!679;CL:0000255!3.07e-07!679;CL:0000012!4.44e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.40e-10;32!CL:0000192;6.29e-09;43!CL:1000449;2.80e-08;15!CL:0002681;8.42e-07;12!CL:0002584;8.42e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.58e-25,250;CL:0000222,4.21e-20,121;CL:0000192,3.02e-12,43;CL:0000514,3.02e-12,43;CL:0000393,7.77e-12,61;CL:0000211,7.77e-12,61;CL:0000187,3.27e-11,55;CL:0000359,1.49e-10,32;CL:0000680,1.56e-10,58;CL:0000056,1.56e-10,58;CL:0000355,1.56e-10,58;CL:0000066,9.57e-10,253;CL:0000213,6.64e-09,58;CL:0000215,6.64e-09,58;CL:1000449,2.58e-08,15;CL:0000115,5.06e-07,36;CL:0002078,6.62e-07,45;CL:0002681,8.12e-07,12;CL:0002584,8.12e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;6.29e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.23e-16!312;UBERON:0000483!6.49e-16!309;UBERON:0003914!1.10e-14!118;UBERON:0002049!7.86e-14!79;UBERON:0007798!7.86e-14!79;UBERON:0000025!1.74e-13!194;UBERON:0000477!1.88e-13!286;UBERON:0001637!2.73e-12!42;UBERON:0003509!2.73e-12!42;UBERON:0004572!2.73e-12!42;UBERON:0004872!4.22e-12!84;UBERON:0004111!6.16e-11!241;UBERON:0001981!6.20e-11!60;UBERON:0007500!6.20e-11!60;UBERON:0004537!6.20e-11!60;UBERON:0006965!6.20e-11!60;UBERON:0000055!1.03e-10!69;UBERON:0000475!3.05e-10!365;UBERON:0000490!4.65e-10!138;UBERON:0005256!9.96e-10!143;UBERON:0004290!1.02e-09!70;UBERON:0004535!1.41e-09!110;UBERON:0000914!1.63e-09!83;UBERON:0002329!1.63e-09!83;UBERON:0003077!1.63e-09!83;UBERON:0003059!1.63e-09!83;UBERON:0007282!1.63e-09!83;UBERON:0009618!1.63e-09!83;UBERON:0007285!1.63e-09!83;UBERON:0000481!1.74e-09!347;UBERON:0001009!1.82e-09!113;UBERON:0001134!4.59e-09!61;UBERON:0002036!4.59e-09!61;UBERON:0003082!4.59e-09!61;UBERON:0000486!5.99e-09!82;UBERON:0004573!1.42e-08!33;UBERON:0004571!1.42e-08!33;UBERON:0002385!1.90e-08!63;UBERON:0001015!1.90e-08!63;UBERON:0000383!1.90e-08!63;UBERON:0004211!7.69e-08!16;UBERON:0001285!7.69e-08!16;UBERON:0007684!7.69e-08!16;UBERON:0003220!7.69e-08!16;UBERON:0004208!7.69e-08!16;UBERON:0000064!5.53e-07!219;UBERON:0006555!6.20e-07!17;UBERON:0005103!6.20e-07!17;UBERON:0000083!6.20e-07!17;UBERON:0009201!6.20e-07!17;UBERON:0004819!6.20e-07!17;UBERON:0006553!6.20e-07!17;UBERON:0003074!6.20e-07!17;UBERON:0003060!6.20e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.30e-09;42!UBERON:0003509;5.30e-09;42!UBERON:0004572;5.30e-09;42!UBERON:0003914;1.15e-08;74!UBERON:0006555;2.80e-08;15!UBERON:0004819;2.80e-08;15!UBERON:0001285;2.80e-08;15!UBERON:0007684;2.80e-08;15!UBERON:0007500;6.00e-08;56!UBERON:0001981;6.00e-08;56!UBERON:0004537;6.00e-08;56!UBERON:0000353;7.44e-08;15!UBERON:0004573;7.73e-08;33!UBERON:0004571;7.73e-08;33!UBERON:0002049;5.18e-07;75!UBERON:0007798;5.18e-07;75!UBERON:0001225;8.42e-07;12!UBERON:0008987;8.42e-07;12 | |||
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| ||
|short_description=p1@PPP2R4 | |||
}} | }} |
Latest revision as of 21:58, 15 September 2015
Short description: | p1@PPP2R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP2R4_5end |
Coexpression cluster: | C1671_Alveolar_Mesenchymal_Renal_Pericytes_Fibroblast_Placental_Smooth |
Association with transcript: | 0bp_to_ENST00000347048, ENST00000355007, ENST00000357197, ENST00000445241, ENST00000452489_5end |
EntrezGene: | PPP2R4 |
HGNC: | 9308 |
UniProt: | Q68CR8Q5T948B4DZF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.58e-25 | 250 |
mesodermal cell | 4.21e-20 | 121 |
smooth muscle cell | 3.02e-12 | 43 |
smooth muscle myoblast | 3.02e-12 | 43 |
electrically responsive cell | 7.77e-12 | 61 |
electrically active cell | 7.77e-12 | 61 |
muscle cell | 3.27e-11 | 55 |
vascular associated smooth muscle cell | 1.49e-10 | 32 |
muscle precursor cell | 1.56e-10 | 58 |
myoblast | 1.56e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.56e-10 | 58 |
epithelial cell | 9.57e-10 | 253 |
lining cell | 6.64e-09 | 58 |
barrier cell | 6.64e-09 | 58 |
epithelial cell of nephron | 2.58e-08 | 15 |
endothelial cell | 5.06e-07 | 36 |
meso-epithelial cell | 6.62e-07 | 45 |
kidney cortical cell | 8.12e-07 | 12 |
renal cortical epithelial cell | 8.12e-07 | 12 |