FFCP PHASE1:Mm9::chr2:17970414..17970449,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:17970414..17970449,- to FFCP PHASE1:Mm9::chr2:17970414..17970449,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72668 | |EntrezGene=72668 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q80YR3 | |UniProt=Q80YR3 | ||
|association_with_transcript=-3bp_to_ENSMUST00000142856_5end | |||
|cluster_id=chr2:17970414..17970449,- | |||
|description=CAGE_peak_1_at_2810030E01Rik_5end | |||
|id=chr2:17970414..17970449,- | |||
|ontology_enrichment_celltype=CL:0002319!9.93e-12!43;CL:0000221!1.60e-11!44;CL:0000133!1.60e-11!44;CL:0000540!4.59e-10!33;CL:0000047!4.59e-10!33;CL:0000031!4.59e-10!33;CL:0000404!4.59e-10!33;CL:0000055!2.93e-08!50;CL:0000117!3.46e-07!23;CL:0000337!3.46e-07!23;CL:0000393!4.31e-07!39;CL:0000211!4.31e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.28e-14,43;CL:0000221,9.05e-14,44;CL:0000133,9.05e-14,44;CL:0000540,7.40e-12,33;CL:0000047,7.40e-12,33;CL:0000031,7.40e-12,33;CL:0000404,7.40e-12,33;CL:0000393,1.13e-08,39;CL:0000211,1.13e-08,39;CL:0000117,1.23e-08,23;CL:0000337,1.23e-08,23;CL:0002609,1.96e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.77e-10!102;UBERON:0000924!8.77e-10!102;UBERON:0006601!8.77e-10!102;UBERON:0001017!9.38e-08!73;UBERON:0005743!9.38e-08!73;UBERON:0000073!2.00e-07!75;UBERON:0001016!2.00e-07!75;UBERON:0002346!4.39e-07!71;UBERON:0003075!4.39e-07!71;UBERON:0007284!4.39e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.25e-12,95;UBERON:0000924,5.25e-12,95;UBERON:0006601,5.25e-12,95;UBERON:0001017,1.96e-10,73;UBERON:0002346,2.12e-10,64;UBERON:0003075,2.12e-10,64;UBERON:0007284,2.12e-10,64;UBERON:0010314,3.02e-10,92;UBERON:0001016,8.60e-10,75;UBERON:0003056,2.54e-09,49;UBERON:0010371,1.01e-08,73;UBERON:0000970,4.69e-07,9;UBERON:0000019,4.69e-07,9;UBERON:0000047,4.69e-07,9;UBERON:0010312,4.69e-07,9;UBERON:0004088,4.69e-07,9;UBERON:0002104,4.69e-07,9;UBERON:0001456,4.69e-07,9;UBERON:0003072,4.69e-07,9;UBERON:0004128,4.69e-07,9;UBERON:0003071,4.69e-07,9 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.468129052643987,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0291571935005,4.83309602015838,4.27745777963423,2.93971485413261,10.062679505548,0,0.725362142011344,0,0.771778308107841,0.286533439938757,0,12.1389876515759,16.9277113367051,12.0427966666174,0.677689064138264,0,0,0,0,2.09720077362883,2.68952813725088,16.7977171939734,19.4408551197635,15.3537221786509,1.14260393761521,1.10434270475807,12.6165523191403,15.4311208339361,19.3035945188104,0,0.383062014255563,0.46081959976873,10.6827893061457,9.14876436024097,12.5019208933622,0.558365998002762,0,0.61119299110724,1.47314292736834,1.42371680799103,5.59198337475902,0.075726193333184,0.377857800533928,0.869593466105033,0,0,0.539703191637817,0,0.896053774194671,0.702222100658759,0,0.779358013808606,0,0.422530259330042,1.28326477414318,0,0,0,0,0,0.45673551887624,0,0.148442139064825,1.04091196059682,1.21786191324856,0.691846491768175,1.05505848386836,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0.915001205637253,1.7591609295801,0,0,0.41557608911912,0.324482526135515,1.12023300235348,0,0,1.89397670297827,10.0192741081282,7.12696523743766,9.18316862007281,3.46621081022145,2.10913147369116,4.35586648968489,2.71735001223214,3.10444044886819,11.4251036254406,13.615637772083,10.205165201509,5.04150184583422,2.50242524303038,1.39300866608867,0.205782136407943,3.58261680273288,0,0,0,4.76389276831654,4.22146907965973,2.70093092191522,3.31442629819294,1.96764231747404,2.00547246753592,1.86027155800326,1.07309360559848,0.233530684734339,0.493679549740441,0.164167464079095,0.648550476366846,1.02339991197733,2.41505126820156,0.805238512562231,0.630869845692382,3.49875682089567,0,0,7.25180051819795,3.25131340604614,1.80414445850931,1.00841762311671,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,8.53505554288868,5.9409226557059,7.88954149711563,3.66572390121566,5.04276466635827,1.05203729835478,1.13825766823663,1.18088118383682,0.470996183524124,0.740382983530803,0.296452627087149,1.16791574001266,0.393117990226406,0.449724224769707,0.405720242777006,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0.252578877947112,0.179397413521912,0,1.10851914099963,2.84237117655727,5.0519142697028,3.90413697282933,1.87752198630802,0.670025029767263,0.714130922658041,0.780534591431195,0.472905432318573,0.44292937929755,0.797273843287435,0.163863314715738,0.690739927463582,0.289298117163023,0,0,1.47529281905711,0.827810238914197,0,0.234423373184406,0,0,4.10160685241134,1.56175497718655,1.07711698866399,1.43381278771531,1.55959071857676,1.69845918473299,3.23848561339915,3.21481443702443,2.76701444562566,0.321321316421807,0,1.24645922567079,0.977321756121456,1.15479086080775,1.32745138339963,1.69946445308487,0.906970670894253,0.565815239267694,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0.948110273807448,0,0,1.02131881726136,12.4242154881604,9.31382523235832,7.07312215604255,4.61084607469911,2.31879462882692,1.48094118541909,0,0.704015124191131,0.21183207086382,0,1.31909002353184,0.645857706783622,0.301564624640779,0.358117032009409,0.656563598980245,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0.954670618015114,8.54107182669065,3.04979200690273,1.51207477150522,1.46361807210128,1.52853794622324,0.269728692769641,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,1.64468200648377,0.827292452285488,0.777804753376191,1.16243841129958,1.01373675294467,0.234714477291508,0,0,0,0,0.316011120628178,2.63542779877213,2.15693010046137,0.25984164595559,0.179026695667481,0.79472541912506,0.360586348559907,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0.579568782096571,0.187682475451182,0.915758121336325,0.214368379079066,0,0,0,1.71868654031819,0.515559547031063,0,0,0,0,0.453142408984205,0,11.2090335390911,12.369771075432,6.31714341290296,2.67417388775123,2.51535795153579,0.551530525350042,2.00022055021454,0.412070114477788,1.92551525755089,1.26348605881899,1.77435509923168,1.13175804831646,0.749132059759059,0.960377286073039,0.861532034334199,0.476293691283074,0.811190281613988,0.192909220463705,0.824171801606613,0.441596760403192,1.37147700954166,0.532427418478012,0.953744759789284,1.59881058295561,1.03520318456864,0.930760686808441,0.73171189149109,1.31534855718921,0.543216455383447,0.561142271657738,0.593175090620871,0.29551344712669,0,0.619747364743864,0.771626443924566,1.99848462350357,0.701794825336225,0.644613162144895,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.468129052643987,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0291571935005,4.83309602015838,4.27745777963423,2.93971485413261,10.062679505548,0,0.725362142011344,0,0.771778308107841,0.286533439938757,0,12.1389876515759,16.9277113367051,12.0427966666174,0.677689064138264,0,0,0,0,2.09720077362883,2.68952813725088,16.7977171939734,19.4408551197635,15.3537221786509,1.14260393761521,1.10434270475807,12.6165523191403,15.4311208339361,19.3035945188104,0,0.383062014255563,0.46081959976873,10.6827893061457,9.14876436024097,12.5019208933622,0.558365998002762,0,0.61119299110724,1.47314292736834,1.42371680799103,5.59198337475902,0.075726193333184,0.377857800533928,0.869593466105033,0,0,0.539703191637817,0,0.896053774194671,0.702222100658759,0,0.779358013808606,0,0.422530259330042,1.28326477414318,0,0,0,0,0,0.45673551887624,0,0.148442139064825,1.04091196059682,1.21786191324856,0.691846491768175,1.05505848386836,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0.915001205637253,1.7591609295801,0,0,0.41557608911912,0.324482526135515,1.12023300235348,0,0,1.89397670297827,10.0192741081282,7.12696523743766,9.18316862007281,3.46621081022145,2.10913147369116,4.35586648968489,2.71735001223214,3.10444044886819,11.4251036254406,13.615637772083,10.205165201509,5.04150184583422,2.50242524303038,1.39300866608867,0.205782136407943,3.58261680273288,0,0,0,4.76389276831654,4.22146907965973,2.70093092191522,3.31442629819294,1.96764231747404,2.00547246753592,1.86027155800326,1.07309360559848,0.233530684734339,0.493679549740441,0.164167464079095,0.648550476366846,1.02339991197733,2.41505126820156,0.805238512562231,0.630869845692382,3.49875682089567,0,0,7.25180051819795,3.25131340604614,1.80414445850931,1.00841762311671,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,8.53505554288868,5.9409226557059,7.88954149711563,3.66572390121566,5.04276466635827,1.05203729835478,1.13825766823663,1.18088118383682,0.470996183524124,0.740382983530803,0.296452627087149,1.16791574001266,0.393117990226406,0.449724224769707,0.405720242777006,0,0.25462585178142,0.575392274901621,0,0,0,0,0,0.252578877947112,0.179397413521912,0,1.10851914099963,2.84237117655727,5.0519142697028,3.90413697282933,1.87752198630802,0.670025029767263,0.714130922658041,0.780534591431195,0.472905432318573,0.44292937929755,0.797273843287435,0.163863314715738,0.690739927463582,0.289298117163023,0,0,1.47529281905711,0.827810238914197,0,0.234423373184406,0,0,4.10160685241134,1.56175497718655,1.07711698866399,1.43381278771531,1.55959071857676,1.69845918473299,3.23848561339915,3.21481443702443,2.76701444562566,0.321321316421807,0,1.24645922567079,0.977321756121456,1.15479086080775,1.32745138339963,1.69946445308487,0.906970670894253,0.565815239267694,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0.948110273807448,0,0,1.02131881726136,12.4242154881604,9.31382523235832,7.07312215604255,4.61084607469911,2.31879462882692,1.48094118541909,0,0.704015124191131,0.21183207086382,0,1.31909002353184,0.645857706783622,0.301564624640779,0.358117032009409,0.656563598980245,0,0.18542530201051,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0.138199973804424,0.954670618015114,8.54107182669065,3.04979200690273,1.51207477150522,1.46361807210128,1.52853794622324,0.269728692769641,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,1.64468200648377,0.827292452285488,0.777804753376191,1.16243841129958,1.01373675294467,0.234714477291508,0,0,0,0,0.316011120628178,2.63542779877213,2.15693010046137,0.25984164595559,0.179026695667481,0.79472541912506,0.360586348559907,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0,0.579568782096571,0.187682475451182,0.915758121336325,0.214368379079066,0,0,0,1.71868654031819,0.515559547031063,0,0,0,0,0.453142408984205,0,11.2090335390911,12.369771075432,6.31714341290296,2.67417388775123,2.51535795153579,0.551530525350042,2.00022055021454,0.412070114477788,1.92551525755089,1.26348605881899,1.77435509923168,1.13175804831646,0.749132059759059,0.960377286073039,0.861532034334199,0.476293691283074,0.811190281613988,0.192909220463705,0.824171801606613,0.441596760403192,1.37147700954166,0.532427418478012,0.953744759789284,1.59881058295561,1.03520318456864,0.930760686808441,0.73171189149109,1.31534855718921,0.543216455383447,0.561142271657738,0.593175090620871,0.29551344712669,0,0.619747364743864,0.771626443924566,1.99848462350357,0.701794825336225,0.644613162144895,0.191288332068843,0,0.231867835620421 | ||
|short_description=p1@2810030E01Rik | |||
}} | }} |
Latest revision as of 07:13, 26 September 2015
Short description: | p1@2810030E01Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2810030E01Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | -3bp_to_ENSMUST00000142856_5end |
EntrezGene: | 2810030E01Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.28e-14 | 43 |
ectodermal cell | 9.05e-14 | 44 |
neurectodermal cell | 9.05e-14 | 44 |
neuron | 7.40e-12 | 33 |
neuronal stem cell | 7.40e-12 | 33 |
neuroblast | 7.40e-12 | 33 |
electrically signaling cell | 7.40e-12 | 33 |
electrically responsive cell | 1.13e-08 | 39 |
electrically active cell | 1.13e-08 | 39 |
CNS neuron (sensu Vertebrata) | 1.23e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-08 | 23 |
neuron of cerebral cortex | 1.96e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.25e-12 | 95 |
ectoderm | 5.25e-12 | 95 |
presumptive ectoderm | 5.25e-12 | 95 |
central nervous system | 1.96e-10 | 73 |
neurectoderm | 2.12e-10 | 64 |
neural plate | 2.12e-10 | 64 |
presumptive neural plate | 2.12e-10 | 64 |
structure with developmental contribution from neural crest | 3.02e-10 | 92 |
nervous system | 8.60e-10 | 75 |
pre-chordal neural plate | 2.54e-09 | 49 |
ecto-epithelium | 1.01e-08 | 73 |
eye | 4.69e-07 | 9 |
camera-type eye | 4.69e-07 | 9 |
simple eye | 4.69e-07 | 9 |
immature eye | 4.69e-07 | 9 |
ocular region | 4.69e-07 | 9 |
visual system | 4.69e-07 | 9 |
face | 4.69e-07 | 9 |
optic cup | 4.69e-07 | 9 |
optic vesicle | 4.69e-07 | 9 |
eye primordium | 4.69e-07 | 9 |