FFCP PHASE1:Mm9::chr7:148629213..148629258,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=57913 | |EntrezGene=57913 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2239 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ERV7 | |UniProt=Q9ERV7 | ||
|association_with_transcript=0bp_to_ENSMUST00000106005,ENSMUST00000128703,ENSMUST00000138065,ENSMUST00000154949,NM_022654,uc009klc.1,uc009kld.1,uc012fxb.1_5end | |||
|cluster_id=chr7:148629213..148629258,- | |||
|description=CAGE_peak_2_at_Lrdd_5end | |||
|id=chr7:148629213..148629258,- | |||
|ontology_enrichment_celltype=CL:0000107!1.64e-08!9;CL:0000333!4.38e-07!10;CL:0000095!4.38e-07!10;CL:0000243!4.38e-07!10;CL:0000123!4.38e-07!10;CL:0000125!4.38e-07!10;CL:0000030!4.38e-07!10;CL:0000339!4.38e-07!10;CL:0002453!7.64e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.14e-23,9;CL:0002453,3.61e-18,8;CL:0000034,1.07e-14,97;CL:0000333,2.84e-14,10;CL:0000095,2.84e-14,10;CL:0000243,2.84e-14,10;CL:0000123,2.84e-14,10;CL:0000125,2.84e-14,10;CL:0000030,2.84e-14,10;CL:0000339,2.84e-14,10;CL:0002321,5.40e-14,70;CL:0000128,1.10e-13,6;CL:0000126,1.10e-13,6;CL:0000127,1.10e-13,6;CL:0002319,1.60e-13,43;CL:0000723,1.88e-13,91;CL:0000048,1.88e-13,91;CL:0000221,4.01e-13,44;CL:0000133,4.01e-13,44;CL:0000219,1.15e-10,54;CL:0000393,3.46e-10,39;CL:0000211,3.46e-10,39;CL:0000680,3.96e-10,6;CL:0000187,3.96e-10,6;CL:0000056,3.96e-10,6;CL:0000764,5.76e-09,3;CL:0000765,5.76e-09,3;CL:0000038,5.76e-09,3;CL:0000547,5.76e-09,3;CL:0000222,1.24e-08,7;CL:0000192,1.75e-08,3;CL:0000359,1.75e-08,3;CL:0002539,1.75e-08,3;CL:0000514,1.75e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.76e-09,3;DOID:0060083,5.76e-09,3;DOID:1240,5.76e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0000010!1.13e-08!11;UBERON:0002410!1.64e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.14e-23,9;UBERON:0000010,8.29e-19,11;UBERON:0000013,3.36e-09,3;UBERON:0000011,9.23e-09,3;UBERON:0010313,1.24e-08,3;UBERON:0002342,1.24e-08,3;UBERON:0002005,1.24e-08,3;UBERON:0005428,1.24e-08,3;UBERON:0005062,1.24e-08,3;UBERON:0001135,1.75e-08,3;UBERON:0004237,1.75e-08,3;UBERON:0004695,1.75e-08,3;UBERON:0002111,1.75e-08,3;UBERON:0004178,1.75e-08,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.255129870453209,2.08510997521859,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,10.7955214488137,9.84103660135312,31.6963362030877,0,0,0,0,0,0,0,0.683045484958446,0,7.67970589651021,9.52943153463437,8.9937908559224,4.69434806608824,1.52617609466313,1.97717564461025,2.72201858703997,3.49966054063406,1.43752564364972,0,0,0,1.02903774414379,0.286533439938757,2.06268836910977,0,0,0,14.2314703469035,6.22506357277798,1.3498495759221,0,2.8419204597844,8.38880309451533,7.30014780110954,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0,0,0,0.151452386666368,0.755715601067855,0,0,0,0,0,0,0.140444420131752,1.1930122580464,0.519572009205738,1.06001872353102,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0.662524555381181,0,0,0,0,0,0.239630249011841,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0.710234206755631,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,0.210289948564127,0.308713837137853,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.948339504765408,0.228497025219458,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.488894929326078,1.18821560042632,0.938760993154008,1.34005005953453,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0,0.433947175744535,0,0,0,0,0.160550589987792,0,0.491804836130026,0,10.7272794601527,10.9322848403059,7.53981892064796,16.9667846546312,12.0311284004493,5.94460714656548,17.0020494703456,16.9508397588561,13.4397844501818,0,0,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0.604647113929502,0.377210159511796,0.590603785761546,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0.354680467284547,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.565105371014073,0.27338845544205,0.686334519619568,0,0,0,0.954670618015114,0.949007980743406,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.66183396182839,0,0.258319646955462,0,0.234714477291508,0,0.104859344425711,0,0,0.632022241256357,0,0.308132871494482,0.25984164595559,0.179026695667481,0.79472541912506,0.120195449519969,0.738447635872886,0.605798699688886,0.304827226619999,0.604957110821043,0.487289403698762,0.384847366561318,0.935015217452552,0.226730383615211,0.443971906748129,1.79427713218951,1.67884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0,0.287177344778066,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.25384382367503,0,0,0.407412341537585,0.561142271657738,0.355905054372522,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.255129870453209,2.08510997521859,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,10.7955214488137,9.84103660135312,31.6963362030877,0,0,0,0,0,0,0,0.683045484958446,0,7.67970589651021,9.52943153463437,8.9937908559224,4.69434806608824,1.52617609466313,1.97717564461025,2.72201858703997,3.49966054063406,1.43752564364972,0,0,0,1.02903774414379,0.286533439938757,2.06268836910977,0,0,0,14.2314703469035,6.22506357277798,1.3498495759221,0,2.8419204597844,8.38880309451533,7.30014780110954,0.103689612308478,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0,0,0.131886287730194,0.182975287204819,0,0,0,0,0,0,0,0.151452386666368,0.755715601067855,0,0,0,0,0,0,0.140444420131752,1.1930122580464,0.519572009205738,1.06001872353102,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0.662524555381181,0,0,0,0,0,0.239630249011841,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0.710234206755631,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,0.210289948564127,0.308713837137853,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.948339504765408,0.228497025219458,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.488894929326078,1.18821560042632,0.938760993154008,1.34005005953453,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0,0.433947175744535,0,0,0,0,0.160550589987792,0,0.491804836130026,0,10.7272794601527,10.9322848403059,7.53981892064796,16.9667846546312,12.0311284004493,5.94460714656548,17.0020494703456,16.9508397588561,13.4397844501818,0,0,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0.604647113929502,0.377210159511796,0.590603785761546,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0.354680467284547,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.565105371014073,0.27338845544205,0.686334519619568,0,0,0,0.954670618015114,0.949007980743406,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.66183396182839,0,0.258319646955462,0,0.234714477291508,0,0.104859344425711,0,0,0.632022241256357,0,0.308132871494482,0.25984164595559,0.179026695667481,0.79472541912506,0.120195449519969,0.738447635872886,0.605798699688886,0.304827226619999,0.604957110821043,0.487289403698762,0.384847366561318,0.935015217452552,0.226730383615211,0.443971906748129,1.79427713218951,1.67884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0,0.287177344778066,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.25384382367503,0,0,0.407412341537585,0.561142271657738,0.355905054372522,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p2@Lrdd | |||
}} | }} |
Latest revision as of 04:00, 26 September 2015
Short description: | p2@Lrdd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lrdd_5end |
Coexpression cluster: | MCL_coexpression_mm9:2239 |
Association with transcript: | 0bp_to_ENSMUST00000106005, ENSMUST00000128703, ENSMUST00000138065, ENSMUST00000154949, NM_022654, uc009klc.1, uc009kld.1, uc012fxb.1_5end |
EntrezGene: | Lrdd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.14e-23 | 9 |
peripheral nervous system | 8.29e-19 | 11 |
sympathetic nervous system | 3.36e-09 | 3 |
parasympathetic nervous system | 9.23e-09 | 3 |
neural crest-derived structure | 1.24e-08 | 3 |
neural crest | 1.24e-08 | 3 |
enteric nervous system | 1.24e-08 | 3 |
vagal neural crest | 1.24e-08 | 3 |
neural fold | 1.24e-08 | 3 |
smooth muscle tissue | 1.75e-08 | 3 |
blood vessel smooth muscle | 1.75e-08 | 3 |
arterial system smooth muscle | 1.75e-08 | 3 |
artery smooth muscle tissue | 1.75e-08 | 3 |
aorta smooth muscle tissue | 1.75e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.76e-09 | 3 |
immune system cancer | 5.76e-09 | 3 |
leukemia | 5.76e-09 | 3 |