FFCP PHASE1:Mm9::chr8:14888877..14888900,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:14888877..14888900,+ to FFCP PHASE1:Mm9::chr8:14888877..14888900,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26889 | |EntrezGene=26889 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3Z3T9 | |UniProt=D3Z3T9 | ||
|association_with_transcript=-103bp_to_ENSMUST00000133578_5end | |||
|cluster_id=chr8:14888877..14888900,+ | |||
|description=CAGE_peak_3_at_Cln8_5end | |||
|id=chr8:14888877..14888900,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.91e-07!44;CL:0000133!1.91e-07!44;CL:0002319!2.03e-07!43;CL:0000540!7.71e-07!33;CL:0000047!7.71e-07!33;CL:0000031!7.71e-07!33;CL:0000404!7.71e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.97e-07,44;CL:0000133,1.97e-07,44;CL:0002319,2.10e-07,43;CL:0000540,7.59e-07,33;CL:0000047,7.59e-07,33;CL:0000031,7.59e-07,33;CL:0000404,7.59e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.41e-13!75;UBERON:0001016!1.41e-13!75;UBERON:0004121!2.93e-13!102;UBERON:0000924!2.93e-13!102;UBERON:0006601!2.93e-13!102;UBERON:0001017!1.62e-12!73;UBERON:0005743!1.62e-12!73;UBERON:0002346!8.51e-08!71;UBERON:0003075!8.51e-08!71;UBERON:0007284!8.51e-08!71;UBERON:0000033!1.08e-07!63;UBERON:0001049!1.47e-07!52;UBERON:0005068!1.47e-07!52;UBERON:0006241!1.47e-07!52;UBERON:0007135!1.47e-07!52;UBERON:0000955!2.88e-07!50;UBERON:0006238!2.88e-07!50;UBERON:0002616!4.86e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.39e-14,95;UBERON:0000924,7.39e-14,95;UBERON:0006601,7.39e-14,95;UBERON:0001016,1.62e-13,75;UBERON:0001017,1.85e-12,73;UBERON:0002346,2.35e-08,64;UBERON:0003075,2.35e-08,64;UBERON:0007284,2.35e-08,64;UBERON:0000073,4.34e-08,54;UBERON:0010371,7.25e-08,73;UBERON:0001049,1.66e-07,52;UBERON:0005068,1.66e-07,52;UBERON:0006241,1.66e-07,52;UBERON:0007135,1.66e-07,52 | |||
|phase1_expression=2.40223270657191,3.48975407639361,1.81999695755814,1.20985684522732,0.500895729946347,1.34303417529512,1.63528848416868,0.903863264091034,0.703943610758334,1.17032263160997,2.05461561870606,1.91453181588807,1.19840510951844,1.48614684112296,1.33243904726265,3.64455481301687,6.99561878128147,0.630924330716475,0.959801035240171,0.42438965179803,1.53077922271926,0.695036658406197,0.522399578277871,1.27993938234725,1.83527424853736,1.72269589234506,3.01533397311352,0.646413698057667,0.570070258369122,0.252030129759931,1.77384408524244,3.81018404075779,3.07532393792285,0,0.866554859253824,1.32987716286794,1.02084678131185,0.418531630736908,1.5626706890476,2.09409497589519,0.588231488031014,0,0.485510353031154,1.51076181570693,1.52065396829272,1.10128051297009,0.782391344348039,1.30815093828268,1.75748946187577,2.52758868796568,2.2397827460058,4.31257693094915,0,2.17608642603403,1.68046899571232,1.02903774414379,2.29226751951005,0,3.64169629547276,5.28990979272033,6.33831403506179,2.37191172448392,0.889294796111139,11.2487464660175,3.9554654502679,12.7886420690298,4.79360176829448,6.91592949578798,1.65903379693564,2.56511282830212,2.3135745748652,5.71301968807607,3.53389665522582,3.67472397644862,2.1086003624012,4.5960939330501,5.50579404996943,3.31987079021488,3.5329502648936,3.82470234417562,3.38504281328916,3.12548022334056,2.51264699101243,2.8138130501584,4.12555268997387,3.53554302568401,2.27794689278565,2.60959224155421,7.72407171998477,4.53429360640713,1.73918693221007,3.44169550792555,1.3599426674155,4.31762553310254,1.94932925234301,3.58421509677868,2.52799956237153,2.38602451609281,1.81850203222008,1.7666978725517,2.53518155598025,1.28326477414318,0,0,1.94841936910093,1.01343946190039,0,2.16949371466214,1.8125651855302,2.22663208597237,2.08182392119363,1.21786191324856,2.07553947530453,2.56228488939458,2.11659672844269,3.51866455723091,5.6854842578906,2.74738778147832,2.65383165584962,3.558870698843,2.87093973998512,3.39412677194655,5.59175283654366,4.68449275218475,4.81727425670947,1.78819938646014,1.55759661857696,1.19980546198682,2.54140454146129,4.19413790333504,5.03250663100489,3.39266750704734,3.99795936442236,2.81287003063364,5.81806524766768,5.67844420737152,2.95334155165917,2.23932547098167,1.76905930903572,4.41927897361595,1.69156575851515,2.75882525320168,3.42118046630164,2.41127708537144,1.7009124787832,2.562274405697,2.71735001223214,3.62184719034622,3.44908788692548,2.64748512234947,2.28736461413134,2.84954452155847,1.94633074457919,3.83077383174383,3.49829631893504,2.18937693500343,5.61770549850588,1.80143534980301,0.852490498186778,2.89976081549703,2.11073453982987,2.52086886045421,2.60419209143731,1.77087808572663,1.07986979021165,0.697601834251224,2.14618721119695,2.33530684734339,1.81015834904829,1.47750717671186,2.02672023864639,2.04679982395465,3.51280184465681,3.48936688776967,2.94405927989778,3.91037527041281,0.330418782983798,2.3800550999719,1.2797295032114,1.85789337488351,1.80414445850931,2.62188582010345,1.33426826306922,1.71203063501303,2.37264530772256,2.63518327558417,3.01602250560323,1.59165177632921,1.55971269695296,0.898819408654221,2.37751854862164,0.995706366271836,2.27601481143698,2.28497025219458,2.25415471346161,1.62921062276251,2.71533482034676,1.96380295692892,1.89709611372772,1.91893192373483,1.56998727841375,2.46794327843601,3.55743152504579,2.33583148002532,2.94838492669805,4.72210436008193,3.24576194221605,5.30589751455317,5.34714288740982,3.45235364940973,3.24270453550071,3.0201755450689,1.43768206527355,4.83783231969054,2.18426371180192,4.04126204715379,3.22915344339442,2.41221760681684,1.84753190166605,3.41084541186873,1.95557971730431,1.18821560042632,1.87752198630802,1.67506257441816,1.6663054862021,2.34160377429359,2.36452716159286,1.55025282754142,2.23236676120482,2.29408640602033,2.76295970985433,2.60368305446721,10.5553898757491,5.4390568381871,2.95058563811422,3.86311444826625,4.33486592967038,4.33683240391152,2.13115428989678,2.7771801992481,2.2085575359138,3.12350995437311,2.58508077279359,3.34556317133573,2.89638276307112,5.09537755419898,3.23848561339915,1.16902343164525,2.76701444562566,3.21321316421807,3.12268187458191,2.49291845134157,2.93196526836437,2.63952196756057,2.65490276679926,1.21390318077491,0.906970670894253,1.13163047853539,1.18120757152309,2.15204603560749,2.32585463851399,2.54473610634254,1.42598951353889,1.8962205476149,2.10837217149998,0,4.76615448055303,1.98067203434441,2.32845630808958,2.57204442037911,1.77340233642274,2.67553226403106,3.29098041204242,2.13125464380219,3.28540391289194,3.1774810629573,2.64634077665954,1.6488625294148,1.93757312035087,1.86970067277283,2.626191568069,1.31312719796049,0.874442509889552,5.37733375830478,3.07567585436135,3.92135049130123,1.48155621895769,3.20226376907975,2.1871076435364,3.66045077130436,2.03974115992626,2.23922323717853,1.93479963326193,0.954670618015114,2.37251995185852,2.03319467126849,1.29606408986162,2.29997125615916,1.09181281873089,1.34864346384821,1.98368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| |phase1_expression=2.40223270657191,3.48975407639361,1.81999695755814,1.20985684522732,0.500895729946347,1.34303417529512,1.63528848416868,0.903863264091034,0.703943610758334,1.17032263160997,2.05461561870606,1.91453181588807,1.19840510951844,1.48614684112296,1.33243904726265,3.64455481301687,6.99561878128147,0.630924330716475,0.959801035240171,0.42438965179803,1.53077922271926,0.695036658406197,0.522399578277871,1.27993938234725,1.83527424853736,1.72269589234506,3.01533397311352,0.646413698057667,0.570070258369122,0.252030129759931,1.77384408524244,3.81018404075779,3.07532393792285,0,0.866554859253824,1.32987716286794,1.02084678131185,0.418531630736908,1.5626706890476,2.09409497589519,0.588231488031014,0,0.485510353031154,1.51076181570693,1.52065396829272,1.10128051297009,0.782391344348039,1.30815093828268,1.75748946187577,2.52758868796568,2.2397827460058,4.31257693094915,0,2.17608642603403,1.68046899571232,1.02903774414379,2.29226751951005,0,3.64169629547276,5.28990979272033,6.33831403506179,2.37191172448392,0.889294796111139,11.2487464660175,3.9554654502679,12.7886420690298,4.79360176829448,6.91592949578798,1.65903379693564,2.56511282830212,2.3135745748652,5.71301968807607,3.53389665522582,3.67472397644862,2.1086003624012,4.5960939330501,5.50579404996943,3.31987079021488,3.5329502648936,3.82470234417562,3.38504281328916,3.12548022334056,2.51264699101243,2.8138130501584,4.12555268997387,3.53554302568401,2.27794689278565,2.60959224155421,7.72407171998477,4.53429360640713,1.73918693221007,3.44169550792555,1.3599426674155,4.31762553310254,1.94932925234301,3.58421509677868,2.52799956237153,2.38602451609281,1.81850203222008,1.7666978725517,2.53518155598025,1.28326477414318,0,0,1.94841936910093,1.01343946190039,0,2.16949371466214,1.8125651855302,2.22663208597237,2.08182392119363,1.21786191324856,2.07553947530453,2.56228488939458,2.11659672844269,3.51866455723091,5.6854842578906,2.74738778147832,2.65383165584962,3.558870698843,2.87093973998512,3.39412677194655,5.59175283654366,4.68449275218475,4.81727425670947,1.78819938646014,1.55759661857696,1.19980546198682,2.54140454146129,4.19413790333504,5.03250663100489,3.39266750704734,3.99795936442236,2.81287003063364,5.81806524766768,5.67844420737152,2.95334155165917,2.23932547098167,1.76905930903572,4.41927897361595,1.69156575851515,2.75882525320168,3.42118046630164,2.41127708537144,1.7009124787832,2.562274405697,2.71735001223214,3.62184719034622,3.44908788692548,2.64748512234947,2.28736461413134,2.84954452155847,1.94633074457919,3.83077383174383,3.49829631893504,2.18937693500343,5.61770549850588,1.80143534980301,0.852490498186778,2.89976081549703,2.11073453982987,2.52086886045421,2.60419209143731,1.77087808572663,1.07986979021165,0.697601834251224,2.14618721119695,2.33530684734339,1.81015834904829,1.47750717671186,2.02672023864639,2.04679982395465,3.51280184465681,3.48936688776967,2.94405927989778,3.91037527041281,0.330418782983798,2.3800550999719,1.2797295032114,1.85789337488351,1.80414445850931,2.62188582010345,1.33426826306922,1.71203063501303,2.37264530772256,2.63518327558417,3.01602250560323,1.59165177632921,1.55971269695296,0.898819408654221,2.37751854862164,0.995706366271836,2.27601481143698,2.28497025219458,2.25415471346161,1.62921062276251,2.71533482034676,1.96380295692892,1.89709611372772,1.91893192373483,1.56998727841375,2.46794327843601,3.55743152504579,2.33583148002532,2.94838492669805,4.72210436008193,3.24576194221605,5.30589751455317,5.34714288740982,3.45235364940973,3.24270453550071,3.0201755450689,1.43768206527355,4.83783231969054,2.18426371180192,4.04126204715379,3.22915344339442,2.41221760681684,1.84753190166605,3.41084541186873,1.95557971730431,1.18821560042632,1.87752198630802,1.67506257441816,1.6663054862021,2.34160377429359,2.36452716159286,1.55025282754142,2.23236676120482,2.29408640602033,2.76295970985433,2.60368305446721,10.5553898757491,5.4390568381871,2.95058563811422,3.86311444826625,4.33486592967038,4.33683240391152,2.13115428989678,2.7771801992481,2.2085575359138,3.12350995437311,2.58508077279359,3.34556317133573,2.89638276307112,5.09537755419898,3.23848561339915,1.16902343164525,2.76701444562566,3.21321316421807,3.12268187458191,2.49291845134157,2.93196526836437,2.63952196756057,2.65490276679926,1.21390318077491,0.906970670894253,1.13163047853539,1.18120757152309,2.15204603560749,2.32585463851399,2.54473610634254,1.42598951353889,1.8962205476149,2.10837217149998,0,4.76615448055303,1.98067203434441,2.32845630808958,2.57204442037911,1.77340233642274,2.67553226403106,3.29098041204242,2.13125464380219,3.28540391289194,3.1774810629573,2.64634077665954,1.6488625294148,1.93757312035087,1.86970067277283,2.626191568069,1.31312719796049,0.874442509889552,5.37733375830478,3.07567585436135,3.92135049130123,1.48155621895769,3.20226376907975,2.1871076435364,3.66045077130436,2.03974115992626,2.23922323717853,1.93479963326193,0.954670618015114,2.37251995185852,2.03319467126849,1.29606408986162,2.29997125615916,1.09181281873089,1.34864346384821,1.98368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| ||
|short_description=p3@Cln8 | |||
}} | }} |
Latest revision as of 19:19, 1 October 2015
Short description: | p3@Cln8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cln8_5end |
Coexpression cluster: | NA |
Association with transcript: | -103bp_to_ENSMUST00000133578_5end |
EntrezGene: | Cln8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.97e-07 | 44 |
neurectodermal cell | 1.97e-07 | 44 |
neural cell | 2.10e-07 | 43 |
neuron | 7.59e-07 | 33 |
neuronal stem cell | 7.59e-07 | 33 |
neuroblast | 7.59e-07 | 33 |
electrically signaling cell | 7.59e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.39e-14 | 95 |
ectoderm | 7.39e-14 | 95 |
presumptive ectoderm | 7.39e-14 | 95 |
nervous system | 1.62e-13 | 75 |
central nervous system | 1.85e-12 | 73 |
neurectoderm | 2.35e-08 | 64 |
neural plate | 2.35e-08 | 64 |
presumptive neural plate | 2.35e-08 | 64 |
regional part of nervous system | 4.34e-08 | 54 |
ecto-epithelium | 7.25e-08 | 73 |
neural tube | 1.66e-07 | 52 |
neural rod | 1.66e-07 | 52 |
future spinal cord | 1.66e-07 | 52 |
neural keel | 1.66e-07 | 52 |