FFCP PHASE1:Mm9::chr8:35210028..35210067,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:35210028..35210067,- to FFCP PHASE1:Mm9::chr8:35210028..35210067,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68192 | |EntrezGene=68192 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQ74 | |UniProt=Q9CQ74 | ||
|association_with_transcript=19bp_to_ENSMUST00000033910_5end | |||
|cluster_id=chr8:35210028..35210067,- | |||
|description=CAGE_peak_4_at_Leprotl1_5end | |||
|id=chr8:35210028..35210067,- | |||
|ontology_enrichment_celltype=CL:0000055!1.35e-08!50;CL:0000034!8.14e-08!97;CL:0002319!2.95e-07!43;CL:0000723!3.33e-07!91;CL:0000048!3.33e-07!91;CL:0000221!3.60e-07!44;CL:0000133!3.60e-07!44;CL:0000393!9.35e-07!39;CL:0000211!9.35e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.71e-13,97;CL:0000723,4.90e-12,91;CL:0000048,4.90e-12,91;CL:0000219,1.05e-08,54;CL:0002320,2.34e-07,46;CL:0000134,2.34e-07,46;CL:0000393,8.72e-07,39;CL:0000211,8.72e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.05e-11!75;UBERON:0001016!2.05e-11!75;UBERON:0001017!2.19e-11!73;UBERON:0005743!2.19e-11!73;UBERON:0007811!8.56e-10!86;UBERON:0000153!2.82e-09!94;UBERON:0000956!2.19e-08!21;UBERON:0001869!2.19e-08!21;UBERON:0000203!2.19e-08!21;UBERON:0002780!7.59e-08!39;UBERON:0001890!7.59e-08!39;UBERON:0006240!7.59e-08!39;UBERON:0000955!9.48e-08!50;UBERON:0006238!9.48e-08!50;UBERON:0002616!9.55e-08!49;UBERON:0002791!1.19e-07!29;UBERON:0003528!1.19e-07!29;UBERON:0001893!1.19e-07!29;UBERON:0003080!1.29e-07!40;UBERON:0002020!1.33e-07!34;UBERON:0004121!1.49e-07!102;UBERON:0000924!1.49e-07!102;UBERON:0006601!1.49e-07!102;UBERON:0001049!2.82e-07!52;UBERON:0005068!2.82e-07!52;UBERON:0006241!2.82e-07!52;UBERON:0007135!2.82e-07!52;UBERON:0002619!6.53e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,4.29e-10,21;UBERON:0001869,4.29e-10,21;UBERON:0000203,4.29e-10,21;UBERON:0001016,4.34e-09,75;UBERON:0001017,5.30e-09,73;UBERON:0003528,8.67e-09,29;UBERON:0002791,8.67e-09,29;UBERON:0001893,8.67e-09,29;UBERON:0002619,8.53e-08,17;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0002020,2.31e-07,34;UBERON:0003080,2.32e-07,40;UBERON:0002384,2.34e-07,46 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,2.06597317506522,4.92760527530834,5.85161315804984,0.513653904676515,0.638177271962691,3.59521532855532,2.27293046289393,0,0,0,0.473193248037357,0.548457734422955,0,1.27564935226605,0.595745707205312,0.522399578277871,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0,0.837063261473815,0,0,0.588231488031014,0,0.485510353031154,1.38486499773135,1.31790010585369,3.48738829107195,5.47673941043627,0.872100625521786,1.5378032791413,0.972149495371417,1.53985063787899,1.43752564364972,0.335565212115473,4.35217285206807,8.4023449785616,1.80081605225163,1.43266719969378,1.54701627683233,1.82084814773638,3.1739458756322,0,9.82649143000483,9.78224275722253,1.3498495759221,3.9554654502679,3.5524005747305,2.69640099466564,1.53687322128622,1.03689612308478,2.43010688997043,1.47227472945967,0.285650984403804,0.883474163806454,1.46988959057945,1.24599112323707,1.83843757322004,2.20231761998777,1.0214987046815,0.614426133024974,1.58263545276233,0.457438218012048,1.56274011167028,0.279182999001381,0,0.61119299110724,0.589257170947335,0.996601765593721,1.3047961207771,1.36307147999731,0.377857800533928,0.289864488701678,0,0,0,0,0,1.12355536105401,2.21559419351475,2.59786004602869,1.41335829804136,0.563373679106722,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,1.55362730188303,0.148442139064825,0.693941307064543,0.913396434936424,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,0.494389935468748,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,0.510914110417183,4.07371423320129,1.19980546198682,3.30382590389968,0.449371918214468,0.915001205637253,1.63350657746724,2.08589184230732,2.30143911597297,0.62336413367868,1.1356888414743,0.916554274652847,0.248813941220186,0.252722758433675,0,0.650602214813519,0.459804208866946,0.540186389416048,0.452114453507145,0.204109497453984,0.768682321709099,0.655912071918102,0.258703370739016,0.431135985865684,0.378212160335639,0.879755620819744,0.43839146485515,0.278047249225598,0.348252166522167,0.61734640922383,0.796137067273973,0.702213187313235,1.54408744268829,1.42081749697796,0.414251545071004,0.234526059981096,0.720248245844059,0.473489471170421,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.467061369468678,0.493679549740441,0.32833492815819,0.324275238183423,0.292399974850665,0,0.268412837520744,1.47202963994889,1.13195073617213,0.330418782983798,0,0.426576501070468,0.928946687441754,0.257734922644187,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0.823494773620054,0.251335208800269,0,0.974820435595601,0.898819408654221,0,0.398282546508734,1.51734320762465,1.14248512609729,0,0.610953983535943,0,0.49095073923223,0.569128834118316,0,0.156998727841375,0.123397163921801,0,0,0.589676985339609,0,0.405720242777006,0,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0.757965647081939,0.488894929326078,0.678980343100753,1.40814148973101,0.502518772325447,0,0.390267295715598,0.315270288212382,0.664394068946325,0.956728611944923,0.655453258862952,0.345369963731791,0.723245292907558,4.52373851817817,3.26343410291226,0,2.20749397043786,0.80275294993896,0.35163505977661,0.819674726883377,0,0.631016438832513,3.12350995437311,1.07711698866399,0.955875191810208,0.891194696329576,2.26461224631066,2.02405350837447,1.46127928955656,0.395287777946524,0.642642632843614,0.567760340833074,0.712262414669021,0.977321756121456,0.824850614862677,0,0.485561272309963,0,0,0,0,0.775284879504663,0.363533729477506,0.356497378384721,0,2.10837217149998,0,0,0.720244376125241,1.55230420539305,1.28602221018955,1.24138163549592,0.713475270408282,0.493647061806363,0.913394847343798,0.23467170806371,0.847328283455281,0,0,0.645857706783622,0.663442174209714,0.238744688006273,0.328281799490123,0.582961673259701,0.556275906031529,0.512612642393558,0,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,6.96911562974807,7.27747552083022,5.11339903076368,1.90934123603023,1.58167996790568,0.203319467126849,0.324016022465404,0,0.436725127492355,0.404593039154462,0.661227645802687,0.785267825952089,0.388844919875379,0,0.56369293868419,0.897099276263873,0.496375471371293,0.583353565032143,0.904118764344118,0.506868376472335,0.821500670520278,1.95306577265925,1.8874681996628,1.44950472495604,0.576060012515731,1.89606672376907,0.405450430580328,0.924398614483445,1.68897069871134,1.07416017400489,1.58945083825012,1.08175904567972,0.443068581523732,0.908698049533329,0.990688486514998,1.71404514732629,1.94915761479505,1.25075394132428,1.40252282617883,1.36038230169127,0.221985953374065,0.358855426437903,0.335769232728157,0.19318959403219,1.50145980360946,0.73260649706906,0.857473516316263,0.501572104035363,2.25900737046827,2.30162618253588,2.29158205375759,2.57779773515531,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| |phase1_expression=0.640595388419176,0,0,0,0,0,0,2.06597317506522,4.92760527530834,5.85161315804984,0.513653904676515,0.638177271962691,3.59521532855532,2.27293046289393,0,0,0,0.473193248037357,0.548457734422955,0,1.27564935226605,0.595745707205312,0.522399578277871,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0,0.837063261473815,0,0,0.588231488031014,0,0.485510353031154,1.38486499773135,1.31790010585369,3.48738829107195,5.47673941043627,0.872100625521786,1.5378032791413,0.972149495371417,1.53985063787899,1.43752564364972,0.335565212115473,4.35217285206807,8.4023449785616,1.80081605225163,1.43266719969378,1.54701627683233,1.82084814773638,3.1739458756322,0,9.82649143000483,9.78224275722253,1.3498495759221,3.9554654502679,3.5524005747305,2.69640099466564,1.53687322128622,1.03689612308478,2.43010688997043,1.47227472945967,0.285650984403804,0.883474163806454,1.46988959057945,1.24599112323707,1.83843757322004,2.20231761998777,1.0214987046815,0.614426133024974,1.58263545276233,0.457438218012048,1.56274011167028,0.279182999001381,0,0.61119299110724,0.589257170947335,0.996601765593721,1.3047961207771,1.36307147999731,0.377857800533928,0.289864488701678,0,0,0,0,0,1.12355536105401,2.21559419351475,2.59786004602869,1.41335829804136,0.563373679106722,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,1.55362730188303,0.148442139064825,0.693941307064543,0.913396434936424,0.461230994512117,0.301445281105245,0.352766121407114,0.251333182659351,0.494389935468748,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,0.510914110417183,4.07371423320129,1.19980546198682,3.30382590389968,0.449371918214468,0.915001205637253,1.63350657746724,2.08589184230732,2.30143911597297,0.62336413367868,1.1356888414743,0.916554274652847,0.248813941220186,0.252722758433675,0,0.650602214813519,0.459804208866946,0.540186389416048,0.452114453507145,0.204109497453984,0.768682321709099,0.655912071918102,0.258703370739016,0.431135985865684,0.378212160335639,0.879755620819744,0.43839146485515,0.278047249225598,0.348252166522167,0.61734640922383,0.796137067273973,0.702213187313235,1.54408744268829,1.42081749697796,0.414251545071004,0.234526059981096,0.720248245844059,0.473489471170421,0.590292695242212,0.462801338662135,0.465067889500816,0.268273401399619,0.467061369468678,0.493679549740441,0.32833492815819,0.324275238183423,0.292399974850665,0,0.268412837520744,1.47202963994889,1.13195073617213,0.330418782983798,0,0.426576501070468,0.928946687441754,0.257734922644187,0.403367049246685,0.444756087689741,0.190225626112559,0.474529061544512,0.823494773620054,0.251335208800269,0,0.974820435595601,0.898819408654221,0,0.398282546508734,1.51734320762465,1.14248512609729,0,0.610953983535943,0,0.49095073923223,0.569128834118316,0,0.156998727841375,0.123397163921801,0,0,0.589676985339609,0,0.405720242777006,0,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0.757965647081939,0.488894929326078,0.678980343100753,1.40814148973101,0.502518772325447,0,0.390267295715598,0.315270288212382,0.664394068946325,0.956728611944923,0.655453258862952,0.345369963731791,0.723245292907558,4.52373851817817,3.26343410291226,0,2.20749397043786,0.80275294993896,0.35163505977661,0.819674726883377,0,0.631016438832513,3.12350995437311,1.07711698866399,0.955875191810208,0.891194696329576,2.26461224631066,2.02405350837447,1.46127928955656,0.395287777946524,0.642642632843614,0.567760340833074,0.712262414669021,0.977321756121456,0.824850614862677,0,0.485561272309963,0,0,0,0,0.775284879504663,0.363533729477506,0.356497378384721,0,2.10837217149998,0,0,0.720244376125241,1.55230420539305,1.28602221018955,1.24138163549592,0.713475270408282,0.493647061806363,0.913394847343798,0.23467170806371,0.847328283455281,0,0,0.645857706783622,0.663442174209714,0.238744688006273,0.328281799490123,0.582961673259701,0.556275906031529,0.512612642393558,0,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,6.96911562974807,7.27747552083022,5.11339903076368,1.90934123603023,1.58167996790568,0.203319467126849,0.324016022465404,0,0.436725127492355,0.404593039154462,0.661227645802687,0.785267825952089,0.388844919875379,0,0.56369293868419,0.897099276263873,0.496375471371293,0.583353565032143,0.904118764344118,0.506868376472335,0.821500670520278,1.95306577265925,1.8874681996628,1.44950472495604,0.576060012515731,1.89606672376907,0.405450430580328,0.924398614483445,1.68897069871134,1.07416017400489,1.58945083825012,1.08175904567972,0.443068581523732,0.908698049533329,0.990688486514998,1.71404514732629,1.94915761479505,1.25075394132428,1.40252282617883,1.36038230169127,0.221985953374065,0.358855426437903,0.335769232728157,0.19318959403219,1.50145980360946,0.73260649706906,0.857473516316263,0.501572104035363,2.25900737046827,2.30162618253588,2.29158205375759,2.57779773515531,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| ||
|short_description=p4@Leprotl1 | |||
}} | }} |
Latest revision as of 22:32, 1 October 2015
Short description: | p4@Leprotl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Leprotl1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENSMUST00000033910_5end |
EntrezGene: | Leprotl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.71e-13 | 97 |
somatic stem cell | 4.90e-12 | 91 |
multi fate stem cell | 4.90e-12 | 91 |
motile cell | 1.05e-08 | 54 |
connective tissue cell | 2.34e-07 | 46 |
mesenchymal cell | 2.34e-07 | 46 |
electrically responsive cell | 8.72e-07 | 39 |
electrically active cell | 8.72e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 4.29e-10 | 21 |
cerebral hemisphere | 4.29e-10 | 21 |
pallium | 4.29e-10 | 21 |
nervous system | 4.34e-09 | 75 |
central nervous system | 5.30e-09 | 73 |
brain grey matter | 8.67e-09 | 29 |
regional part of telencephalon | 8.67e-09 | 29 |
telencephalon | 8.67e-09 | 29 |
regional part of cerebral cortex | 8.53e-08 | 17 |
regional part of forebrain | 1.01e-07 | 39 |
forebrain | 1.01e-07 | 39 |
future forebrain | 1.01e-07 | 39 |
gray matter | 2.31e-07 | 34 |
anterior neural tube | 2.32e-07 | 40 |
connective tissue | 2.34e-07 | 46 |