FFCP PHASE1:Hg19::chr10:33623784..33623806,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8829 | |EntrezGene=8829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8004 | |HGNC=8004 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T7F0 | |UniProt=Q5T7F0 | ||
|association_with_transcript=-16bp_to_uc001iwv.3,uc001iww.3,uc001ixb.1,uc009xlz.2_5end | |association_with_transcript=-16bp_to_uc001iwv.3,uc001iww.3,uc001ixb.1,uc009xlz.2_5end | ||
|cluster_id=chr10:33623784..33623806,- | |||
|coexpression_cluster_id=C2059 | |||
|description=CAGE_peak_1_at_NRP1_5end | |description=CAGE_peak_1_at_NRP1_5end | ||
|id=chr10:33623784..33623806,- | |id=chr10:33623784..33623806,- | ||
|ontology_enrichment_celltype=CL:0000055!1.55e-24!180;CL:0000057!8.29e-19!75;CL:0000222!2.26e-15!119;CL:0000680!3.47e-13!57;CL:0000056!3.47e-13!57;CL:0000355!3.47e-13!57;CL:0000183!9.38e-13!59;CL:0000187!1.25e-12!54;CL:0000393!6.30e-11!60;CL:0000211!6.30e-11!60;CL:0000220!2.33e-10!246;CL:0002321!5.10e-10!248;CL:0002620!6.63e-10!23;CL:0000192!1.71e-09!42;CL:0000514!1.71e-09!42;CL:0000359!1.82e-08!32 | |ontology_enrichment_celltype=CL:0000055!1.55e-24!180;CL:0000057!8.29e-19!75;CL:0000222!2.26e-15!119;CL:0000680!3.47e-13!57;CL:0000056!3.47e-13!57;CL:0000355!3.47e-13!57;CL:0000183!9.38e-13!59;CL:0000187!1.25e-12!54;CL:0000393!6.30e-11!60;CL:0000211!6.30e-11!60;CL:0000220!2.33e-10!246;CL:0002321!5.10e-10!248;CL:0002620!6.63e-10!23;CL:0000192!1.71e-09!42;CL:0000514!1.71e-09!42;CL:0000359!1.82e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.67e-10;23!CL:0000359;4.45e-08;32!CL:0000057;6.64e-08;73!CL:0000192;1.02e-07;43!CL:0000187;1.17e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.79e-19,76;CL:0000222,1.04e-15,121;CL:0000680,1.18e-13,58;CL:0000056,1.18e-13,58;CL:0000355,1.18e-13,58;CL:0000187,4.31e-13,55;CL:0000393,3.86e-11,61;CL:0000211,3.86e-11,61;CL:0002321,3.64e-10,250;CL:0002620,5.66e-10,23;CL:0000192,6.40e-10,43;CL:0000514,6.40e-10,43;CL:0000359,1.60e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000355;8.65e-08;58!CL:0000514;1.02e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.99e-20!659;UBERON:0005256!2.20e-19!143;UBERON:0002100!3.55e-18!216;UBERON:0000914!8.27e-18!83;UBERON:0002329!8.27e-18!83;UBERON:0003077!8.27e-18!83;UBERON:0003059!8.27e-18!83;UBERON:0007282!8.27e-18!83;UBERON:0009618!8.27e-18!83;UBERON:0007285!8.27e-18!83;UBERON:0000467!2.92e-16!625;UBERON:0004290!5.80e-16!70;UBERON:0000475!6.58e-16!365;UBERON:0000480!6.68e-16!626;UBERON:0003914!4.23e-15!118;UBERON:0000486!7.62e-15!82;UBERON:0002049!5.54e-14!79;UBERON:0007798!5.54e-14!79;UBERON:0001134!1.19e-13!61;UBERON:0002036!1.19e-13!61;UBERON:0003082!1.19e-13!61;UBERON:0002385!2.58e-13!63;UBERON:0001015!2.58e-13!63;UBERON:0000383!2.58e-13!63;UBERON:0000490!2.92e-13!138;UBERON:0003104!4.72e-13!238;UBERON:0009142!4.72e-13!238;UBERON:0004872!1.71e-12!84;UBERON:0000481!8.99e-12!347;UBERON:0003102!1.09e-11!95;UBERON:0000055!1.59e-11!69;UBERON:0001981!4.37e-11!60;UBERON:0007500!4.37e-11!60;UBERON:0004537!4.37e-11!60;UBERON:0006965!4.37e-11!60;UBERON:0000119!5.88e-11!312;UBERON:0000926!6.48e-11!448;UBERON:0004120!6.48e-11!448;UBERON:0006603!6.48e-11!448;UBERON:0002050!8.23e-11!605;UBERON:0005423!8.23e-11!605;UBERON:0000922!8.26e-11!612;UBERON:0000483!1.13e-10!309;UBERON:0000923!1.79e-10!604;UBERON:0005291!1.79e-10!604;UBERON:0006598!1.79e-10!604;UBERON:0002532!1.79e-10!604;UBERON:0001637!2.14e-10!42;UBERON:0003509!2.14e-10!42;UBERON:0004572!2.14e-10!42;UBERON:0001009!3.22e-10!113;UBERON:0004573!6.36e-10!33;UBERON:0004571!6.36e-10!33;UBERON:0004535!6.72e-10!110;UBERON:0002199!7.37e-09!45;UBERON:0002416!7.37e-09!45;UBERON:0000477!8.30e-09!286;UBERON:0002097!1.21e-08!40;UBERON:0000947!7.37e-08!21;UBERON:0010191!7.37e-08!21;UBERON:0004111!1.94e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.52e-09;33!UBERON:0004571;1.52e-09;33!UBERON:0002385;6.88e-09;31!UBERON:0001015;6.88e-09;31!UBERON:0000383;6.88e-09;31!UBERON:0001637;4.59e-08;42!UBERON:0003509;4.59e-08;42!UBERON:0004572;4.59e-08;42!UBERON:0000947;6.51e-08;21!UBERON:0010191;6.51e-08;21!UBERON:0002097;8.64e-07;41 | |||
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| ||
|short_description=p1@NRP1 | |short_description=p1@NRP1 | ||
}} | }} |
Latest revision as of 01:03, 18 September 2015
Short description: | p1@NRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRP1_5end |
Coexpression cluster: | C2059_Myoblast_prostate_tridermal_mucinous_myxofibrosarcoma_mesenchymal_osteosarcoma |
Association with transcript: | -16bp_to_uc001iwv.3, uc001iww.3, uc001ixb.1, uc009xlz.2_5end |
EntrezGene: | NRP1 |
HGNC: | 8004 |
UniProt: | Q5T7F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.79e-19 | 76 |
mesodermal cell | 1.04e-15 | 121 |
muscle precursor cell | 1.18e-13 | 58 |
myoblast | 1.18e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.18e-13 | 58 |
muscle cell | 4.31e-13 | 55 |
electrically responsive cell | 3.86e-11 | 61 |
electrically active cell | 3.86e-11 | 61 |
embryonic cell | 3.64e-10 | 250 |
skin fibroblast | 5.66e-10 | 23 |
smooth muscle cell | 6.40e-10 | 43 |
smooth muscle myoblast | 6.40e-10 | 43 |
vascular associated smooth muscle cell | 1.60e-08 | 32 |