FFCP PHASE1:Mm9::chr16:38132085..38132122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1932 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:38132085..38132122,+ | |||
|description=CAGE_peak_at_chr16:38132085..38132122,+ | |description=CAGE_peak_at_chr16:38132085..38132122,+ | ||
|id=chr16:38132085..38132122,+ | |id=chr16:38132085..38132122,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.83e-08,12;CL:0000988,8.98e-08,32;CL:0002032,8.98e-08,32;CL:0000037,8.98e-08,32;CL:0000837,8.98e-08,32;CL:0000542,1.45e-07,13;CL:0000051,1.45e-07,13;CL:0002031,2.14e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.58e-13!48;UBERON:0004177!2.45e-12!29;UBERON:0002390!1.54e-11!45;UBERON:0003061!1.54e-11!45;UBERON:0003408!2.43e-10!24;UBERON:0002370!1.29e-09!23;UBERON:0000974!1.29e-09!23;UBERON:0004807!1.29e-09!23;UBERON:0005058!1.29e-09!23;UBERON:0003351!1.29e-09!23;UBERON:0009113!1.29e-09!23;UBERON:0003295!1.29e-09!23;UBERON:0009722!1.29e-09!23;UBERON:0005562!1.29e-09!23;UBERON:0007690!1.29e-09!23;UBERON:0006562!6.90e-09!24;UBERON:0001557!6.90e-09!24;UBERON:0001042!6.90e-09!24;UBERON:0008814!6.90e-09!24;UBERON:0009145!6.90e-09!24;UBERON:0002405!9.69e-08!70;UBERON:0003081!1.10e-07!88;UBERON:0000063!2.13e-07!35;UBERON:0000072!4.52e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.29e-19,48;UBERON:0002405,2.29e-19,48;UBERON:0003408,1.88e-17,24;UBERON:0002390,5.48e-17,45;UBERON:0003061,5.48e-17,45;UBERON:0004177,8.84e-16,29;UBERON:0005057,8.84e-16,29;UBERON:0002370,1.14e-15,23;UBERON:0000974,1.14e-15,23;UBERON:0004807,1.14e-15,23;UBERON:0005058,1.14e-15,23;UBERON:0003351,1.14e-15,23;UBERON:0009113,1.14e-15,23;UBERON:0003295,1.14e-15,23;UBERON:0009722,1.14e-15,23;UBERON:0005562,1.14e-15,23;UBERON:0007690,1.14e-15,23;UBERON:0006562,6.85e-15,24;UBERON:0001557,6.85e-15,24;UBERON:0001042,6.85e-15,24;UBERON:0008814,6.85e-15,24;UBERON:0009145,6.85e-15,24;UBERON:0000072,6.72e-13,27;UBERON:0000077,1.83e-12,35;UBERON:0007811,1.57e-10,36;UBERON:0001004,1.43e-08,42;UBERON:0000153,2.69e-08,43;UBERON:0000065,1.71e-07,41;UBERON:0003081,2.45e-07,87 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,1.29123323441576,0.140788722151667,0.70219357896598,0.856089841127525,0.478632953972018,1.19840510951844,1.04904482902797,0.333109761815663,0.809901069559304,0,2.68142840554502,2.87940310572051,1.69755860719212,0.425216450755349,2.28369187762036,1.82839852397255,0.799962113967033,1.14704640533585,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0.204169356262369,1.67412652294763,0,1.57057123192139,9.99993529652724,2.04913645487534,3.88408282424923,0,0,0,0.782391344348039,0,0,0,0,0,1.8456086666351,0,1.00828139742739,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0.46081959976873,0,0,0,0,1.12552522006336,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0.742210695324124,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0.484875253135222,0,0,0.209446706813455,0.766371165625774,0.958520996047362,0,0.889491589511453,0.299581278809645,0.915001205637253,0.251308704225729,0.347648640384553,0.255715457330331,0.41557608911912,0,0,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,1.02939162845886,1.13665399758237,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0.32833492815819,0.324275238183423,0.146199987425332,0,0.536825675041487,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.280543279561274,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0.482443521363367,0.554259570499814,0,0,0.169745085775188,0,0,0,0,0.630540576424764,0,0.159454768657487,0.81931657357869,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.63549621259146,0.661585194164886,0,0,0,0,0,0.291480836629851,0.927126510052548,0.341741761595705,0.619160603889667,0.185194527369712,0.941842285023455,1.23024804948923,1.14389086603261,0.509935289981566,1.11961161858926,0.967399816630967,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,2.4853572523477,0,0.149516546043979,0,0,0,0,0.234714477291508,0,0,0,0.576060012515731,2.52808896502543,0,0.308132871494482,0.51968329191118,1.07416017400489,1.98681354781265,2.64429988943931,3.54454865218985,3.73575864808146,4.34378797933499,4.33552596088414,4.0932309910696,4.52195655709548,8.53201385925453,0,0,0.0897138566094757,0,0,0,0,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0,0,0.548783918618318,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0.441182838239031,0.231867835620421 | |phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,1.29123323441576,0.140788722151667,0.70219357896598,0.856089841127525,0.478632953972018,1.19840510951844,1.04904482902797,0.333109761815663,0.809901069559304,0,2.68142840554502,2.87940310572051,1.69755860719212,0.425216450755349,2.28369187762036,1.82839852397255,0.799962113967033,1.14704640533585,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0.204169356262369,1.67412652294763,0,1.57057123192139,9.99993529652724,2.04913645487534,3.88408282424923,0,0,0,0.782391344348039,0,0,0,0,0,1.8456086666351,0,1.00828139742739,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0.46081959976873,0,0,0,0,1.12552522006336,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0.742210695324124,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0.323533699894818,0,0.484875253135222,0,0,0.209446706813455,0.766371165625774,0.958520996047362,0,0.889491589511453,0.299581278809645,0.915001205637253,0.251308704225729,0.347648640384553,0.255715457330331,0.41557608911912,0,0,0.124406970610093,0.252722758433675,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,1.02939162845886,1.13665399758237,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0.32833492815819,0.324275238183423,0.146199987425332,0,0.536825675041487,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.280543279561274,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0.482443521363367,0.554259570499814,0,0,0.169745085775188,0,0,0,0,0.630540576424764,0,0.159454768657487,0.81931657357869,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.827810238914197,0.321101179975584,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.63549621259146,0.661585194164886,0,0,0,0,0,0.291480836629851,0.927126510052548,0.341741761595705,0.619160603889667,0.185194527369712,0.941842285023455,1.23024804948923,1.14389086603261,0.509935289981566,1.11961161858926,0.967399816630967,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,2.4853572523477,0,0.149516546043979,0,0,0,0,0.234714477291508,0,0,0,0.576060012515731,2.52808896502543,0,0.308132871494482,0.51968329191118,1.07416017400489,1.98681354781265,2.64429988943931,3.54454865218985,3.73575864808146,4.34378797933499,4.33552596088414,4.0932309910696,4.52195655709548,8.53201385925453,0,0,0.0897138566094757,0,0,0,0,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0,0,0.548783918618318,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0,0,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr16:38132085..38132122,+ | |short_description=p@chr16:38132085..38132122,+ | ||
}} | }} |
Latest revision as of 10:18, 6 August 2015
Short description: | p@chr16:38132085..38132122, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:38132085..38132122, + |
Coexpression cluster: | MCL_coexpression_mm9:1932 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.83e-08 | 12 |
hematopoietic cell | 8.98e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.98e-08 | 32 |
hematopoietic stem cell | 8.98e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.98e-08 | 32 |
lymphocyte | 1.45e-07 | 13 |
common lymphoid progenitor | 1.45e-07 | 13 |
hematopoietic lineage restricted progenitor cell | 2.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.29e-19 | 48 |
immune system | 2.29e-19 | 48 |
gland of gut | 1.88e-17 | 24 |
hematopoietic system | 5.48e-17 | 45 |
blood island | 5.48e-17 | 45 |
hemopoietic organ | 8.84e-16 | 29 |
immune organ | 8.84e-16 | 29 |
thymus | 1.14e-15 | 23 |
neck | 1.14e-15 | 23 |
respiratory system epithelium | 1.14e-15 | 23 |
hemolymphoid system gland | 1.14e-15 | 23 |
pharyngeal epithelium | 1.14e-15 | 23 |
thymic region | 1.14e-15 | 23 |
pharyngeal gland | 1.14e-15 | 23 |
entire pharyngeal arch endoderm | 1.14e-15 | 23 |
thymus primordium | 1.14e-15 | 23 |
early pharyngeal endoderm | 1.14e-15 | 23 |
pharynx | 6.85e-15 | 24 |
upper respiratory tract | 6.85e-15 | 24 |
chordate pharynx | 6.85e-15 | 24 |
pharyngeal arch system | 6.85e-15 | 24 |
pharyngeal region of foregut | 6.85e-15 | 24 |
segment of respiratory tract | 6.72e-13 | 27 |
mixed endoderm/mesoderm-derived structure | 1.83e-12 | 35 |
craniocervical region | 1.57e-10 | 36 |
respiratory system | 1.43e-08 | 42 |
anterior region of body | 2.69e-08 | 43 |
respiratory tract | 1.71e-07 | 41 |
lateral plate mesoderm | 2.45e-07 | 87 |