FFCP PHASE1:Mm9::chr1:187265594..187265614,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319562 | |EntrezGene=319562 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BH25 | |UniProt=Q8BH25 | ||
|association_with_transcript=83bp_to_ENSMUST00000143787,NR_038006,uc007dzi.1_5end | |association_with_transcript=83bp_to_ENSMUST00000143787,NR_038006,uc007dzi.1_5end | ||
|cluster_id=chr1:187265594..187265614,- | |||
|description=CAGE_peak_1_at_9630028B13Rik_5end | |description=CAGE_peak_1_at_9630028B13Rik_5end | ||
|id=chr1:187265594..187265614,- | |id=chr1:187265594..187265614,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.65e-19!63;UBERON:0003056!1.40e-15!49;UBERON:0002346!2.50e-15!71;UBERON:0003075!2.50e-15!71;UBERON:0007284!2.50e-15!71;UBERON:0000970!3.13e-12!9;UBERON:0000019!3.13e-12!9;UBERON:0000047!3.13e-12!9;UBERON:0004088!3.13e-12!9;UBERON:0002104!3.13e-12!9;UBERON:0001456!3.13e-12!9;UBERON:0003072!3.13e-12!9;UBERON:0003071!3.13e-12!9;UBERON:0004128!3.13e-12!9;UBERON:0004121!5.60e-12!102;UBERON:0000924!5.60e-12!102;UBERON:0006601!5.60e-12!102;UBERON:0007811!3.10e-11!86;UBERON:0000955!7.16e-11!50;UBERON:0006238!7.16e-11!50;UBERON:0000020!7.28e-11!12;UBERON:0001032!7.28e-11!12;UBERON:0004456!7.28e-11!12;UBERON:0001017!3.70e-10!73;UBERON:0005743!3.70e-10!73;UBERON:0001049!3.88e-10!52;UBERON:0005068!3.88e-10!52;UBERON:0006241!3.88e-10!52;UBERON:0007135!3.88e-10!52;UBERON:0002616!4.24e-10!49;UBERON:0005085!7.65e-10!13;UBERON:0000073!1.12e-09!75;UBERON:0001016!1.12e-09!75;UBERON:0001444!1.25e-09!11;UBERON:0000153!1.64e-09!94;UBERON:0003080!8.63e-08!40;UBERON:0002780!4.16e-07!39;UBERON:0001890!4.16e-07!39;UBERON:0006240!4.16e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,3.96e-62,9;UBERON:0000019,3.96e-62,9;UBERON:0000047,3.96e-62,9;UBERON:0010312,3.96e-62,9;UBERON:0004088,3.96e-62,9;UBERON:0002104,3.96e-62,9;UBERON:0001456,3.96e-62,9;UBERON:0003072,3.96e-62,9;UBERON:0004128,3.96e-62,9;UBERON:0003071,3.96e-62,9;UBERON:0001444,7.94e-51,11;UBERON:0000020,1.38e-46,12;UBERON:0001032,1.38e-46,12;UBERON:0004456,1.38e-46,12;UBERON:0000033,5.38e-43,13;UBERON:0005085,5.38e-43,13;UBERON:0003056,1.81e-17,49;UBERON:0007811,2.23e-15,36;UBERON:0002346,2.86e-13,64;UBERON:0003075,2.86e-13,64;UBERON:0007284,2.86e-13,64;UBERON:0000153,8.13e-13,43;UBERON:0010371,1.42e-11,73;UBERON:0010314,4.56e-09,92;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,1.14058573539325,2.29510095163874,0.841299845405528,0,0,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0,0,0,0.52091337055676,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0,0,0,0,0,0,1.17108398666433,2.29902104433473,4.68161537493908,3.76762044589288,8.91278138882395,21.7793324484245,13.0245397138023,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.886701168211368,0.356737635204141,0.658196082408484,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.341467211508268,0,0,0,0,0.206035057238894,0,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.192075457214608,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724,0,0.355905054372522,0,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,1.14058573539325,2.29510095163874,0.841299845405528,0,0,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0,0,0,0.52091337055676,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0,0,0,0,0,0,1.17108398666433,2.29902104433473,4.68161537493908,3.76762044589288,8.91278138882395,21.7793324484245,13.0245397138023,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.886701168211368,0.356737635204141,0.658196082408484,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.341467211508268,0,0,0,0,0.206035057238894,0,0.252697211763798,0.760437899670719,0.188626341386076,0.37456602987953,0.192075457214608,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0,0,0,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724,0,0.355905054372522,0,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0 | ||
|short_description=p1@9630028B13Rik | |short_description=p1@9630028B13Rik | ||
}} | }} |
Latest revision as of 23:13, 26 September 2015
Short description: | p1@9630028B13Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_9630028B13Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 83bp_to_ENSMUST00000143787, NR_038006, uc007dzi.1_5end |
EntrezGene: | 9630028B13Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 3.96e-62 | 9 |
camera-type eye | 3.96e-62 | 9 |
simple eye | 3.96e-62 | 9 |
immature eye | 3.96e-62 | 9 |
ocular region | 3.96e-62 | 9 |
visual system | 3.96e-62 | 9 |
face | 3.96e-62 | 9 |
optic cup | 3.96e-62 | 9 |
optic vesicle | 3.96e-62 | 9 |
eye primordium | 3.96e-62 | 9 |
subdivision of head | 7.94e-51 | 11 |
sense organ | 1.38e-46 | 12 |
sensory system | 1.38e-46 | 12 |
entire sense organ system | 1.38e-46 | 12 |
head | 5.38e-43 | 13 |
ectodermal placode | 5.38e-43 | 13 |
pre-chordal neural plate | 1.81e-17 | 49 |
craniocervical region | 2.23e-15 | 36 |
neurectoderm | 2.86e-13 | 64 |
neural plate | 2.86e-13 | 64 |
presumptive neural plate | 2.86e-13 | 64 |
anterior region of body | 8.13e-13 | 43 |
ecto-epithelium | 1.42e-11 | 73 |
structure with developmental contribution from neural crest | 4.56e-09 | 92 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |