FFCP PHASE1:Mm9::chr5:49676834..49676848,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=80334 | |EntrezGene=80334 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UFC0 | |UniProt=Q3UFC0 | ||
|association_with_transcript=49bp_to_NM_001199244,uc008xjx.1_5end | |association_with_transcript=49bp_to_NM_001199244,uc008xjx.1_5end | ||
|cluster_id=chr5:49676834..49676848,- | |||
|description=CAGE_peak_5_at_Kcnip4_5end | |description=CAGE_peak_5_at_Kcnip4_5end | ||
|id=chr5:49676834..49676848,- | |id=chr5:49676834..49676848,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.70e-09,3;CL:0002610,1.25e-08,3;CL:0000540,4.53e-07,33;CL:0000047,4.53e-07,33;CL:0000031,4.53e-07,33;CL:0000404,4.53e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.88e-11!73;UBERON:0005743!1.88e-11!73;UBERON:0002346!2.24e-11!71;UBERON:0003075!2.24e-11!71;UBERON:0007284!2.24e-11!71;UBERON:0000073!9.05e-11!75;UBERON:0001016!9.05e-11!75;UBERON:0001049!7.06e-09!52;UBERON:0005068!7.06e-09!52;UBERON:0006241!7.06e-09!52;UBERON:0007135!7.06e-09!52;UBERON:0004121!9.05e-09!102;UBERON:0000924!9.05e-09!102;UBERON:0006601!9.05e-09!102;UBERON:0000955!3.77e-08!50;UBERON:0006238!3.77e-08!50;UBERON:0000033!7.41e-08!63;UBERON:0002616!1.29e-07!49;UBERON:0003076!3.34e-07!12;UBERON:0003057!3.34e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.03e-15,73;UBERON:0001016,1.77e-14,75;UBERON:0000073,5.94e-13,54;UBERON:0003076,1.10e-12,12;UBERON:0003057,1.10e-12,12;UBERON:0002346,1.45e-11,64;UBERON:0003075,1.45e-11,64;UBERON:0007284,1.45e-11,64;UBERON:0001049,1.56e-10,52;UBERON:0005068,1.56e-10,52;UBERON:0006241,1.56e-10,52;UBERON:0007135,1.56e-10,52;UBERON:0004121,2.72e-10,95;UBERON:0000924,2.72e-10,95;UBERON:0006601,2.72e-10,95;UBERON:0011216,1.13e-09,194;UBERON:0010371,1.39e-09,73;UBERON:0004684,1.25e-08,3;UBERON:0002275,1.25e-08,3;UBERON:0010313,3.99e-08,3;UBERON:0002342,3.99e-08,3;UBERON:0002005,3.99e-08,3;UBERON:0005428,3.99e-08,3;UBERON:0005062,3.99e-08,3;UBERON:0000955,8.33e-08,47;UBERON:0006238,8.33e-08,47;UBERON:0004733,1.58e-07,6;UBERON:0004732,1.58e-07,6;UBERON:0002028,1.58e-07,6;UBERON:0007277,1.58e-07,6;UBERON:0002616,7.05e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,1.32521124570968,0,0,0,3.30347642998166,1.91531007127782,1.99688493233117,0.131886287730194,0.0914876436024097,0,1.67509799400829,0.56276261003168,2.75036845998258,0.294628585473668,1.42371680799103,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8326477414318,5.09610479413291,7.11066703153331,0,0,0,0.22836775943812,0,0.445326417194474,0,0,0,0,0.117588707135705,0.502666365318702,0,0.144599356919912,0,0,0,0,3.72783522436244,3.22058876712702,2.30391377494801,0.255457055208591,0,0,0,5.09288173976397,1.83000241127451,0.376963056338593,1.21677024134594,0.767146371990992,2.70124457927428,2.59586020908412,0,0,0.252722758433675,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0.776110112217047,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,1.47202963994889,0.102904612379284,0,0,0,0.928946687441754,1.67527699718721,1.61346819698674,0.444756087689741,1.14135375667535,0,0.494096864172033,0.502670417600539,1.39269530428806,1.16978452271472,0,0.432276099749388,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,5.45872005958493,2.46144541843627,0,0,1.57754109708128,2.34263246577983,1.50796378412959,0,0,0,0.404810701674894,0.584511715822624,0,1.28528526568723,0.141940085208269,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0.712994756769443,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,1.21991680276109,0.756037385752609,0.209088296014469,0.218362563746178,0.674321731924103,0.743881101528023,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,1.37016503954128,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.704276676453562,0.229741875822453,0,0,0,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0.376437521661322,0.423073039458382,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,1.32521124570968,0,0,0,3.30347642998166,1.91531007127782,1.99688493233117,0.131886287730194,0.0914876436024097,0,1.67509799400829,0.56276261003168,2.75036845998258,0.294628585473668,1.42371680799103,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8326477414318,5.09610479413291,7.11066703153331,0,0,0,0.22836775943812,0,0.445326417194474,0,0,0,0,0.117588707135705,0.502666365318702,0,0.144599356919912,0,0,0,0,3.72783522436244,3.22058876712702,2.30391377494801,0.255457055208591,0,0,0,5.09288173976397,1.83000241127451,0.376963056338593,1.21677024134594,0.767146371990992,2.70124457927428,2.59586020908412,0,0,0.252722758433675,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.187403449119458,0.776110112217047,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,1.47202963994889,0.102904612379284,0,0,0,0.928946687441754,1.67527699718721,1.61346819698674,0.444756087689741,1.14135375667535,0,0.494096864172033,0.502670417600539,1.39269530428806,1.16978452271472,0,0.432276099749388,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,5.45872005958493,2.46144541843627,0,0,1.57754109708128,2.34263246577983,1.50796378412959,0,0,0,0.404810701674894,0.584511715822624,0,1.28528526568723,0.141940085208269,0,0,0,0,0.485561272309963,0,0,0,0,0,0,0.712994756769443,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,1.21991680276109,0.756037385752609,0.209088296014469,0.218362563746178,0.674321731924103,0.743881101528023,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.171853182343688,1.37016503954128,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.704276676453562,0.229741875822453,0,0,0,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0.376437521661322,0.423073039458382,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p5@Kcnip4 | |short_description=p5@Kcnip4 | ||
}} | }} |
Latest revision as of 01:37, 26 September 2015
Short description: | p5@Kcnip4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Kcnip4_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 49bp_to_NM_001199244, uc008xjx.1_5end |
EntrezGene: | Kcnip4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.70e-09 | 3 |
raphe nuclei neuron | 1.25e-08 | 3 |
neuron | 4.53e-07 | 33 |
neuronal stem cell | 4.53e-07 | 33 |
neuroblast | 4.53e-07 | 33 |
electrically signaling cell | 4.53e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.03e-15 | 73 |
nervous system | 1.77e-14 | 75 |
regional part of nervous system | 5.94e-13 | 54 |
posterior neural tube | 1.10e-12 | 12 |
chordal neural plate | 1.10e-12 | 12 |
neurectoderm | 1.45e-11 | 64 |
neural plate | 1.45e-11 | 64 |
presumptive neural plate | 1.45e-11 | 64 |
neural tube | 1.56e-10 | 52 |
neural rod | 1.56e-10 | 52 |
future spinal cord | 1.56e-10 | 52 |
neural keel | 1.56e-10 | 52 |
ectoderm-derived structure | 2.72e-10 | 95 |
ectoderm | 2.72e-10 | 95 |
presumptive ectoderm | 2.72e-10 | 95 |
organ system subdivision | 1.13e-09 | 194 |
ecto-epithelium | 1.39e-09 | 73 |
raphe nuclei | 1.25e-08 | 3 |
reticular formation | 1.25e-08 | 3 |
neural crest-derived structure | 3.99e-08 | 3 |
neural crest | 3.99e-08 | 3 |
enteric nervous system | 3.99e-08 | 3 |
vagal neural crest | 3.99e-08 | 3 |
neural fold | 3.99e-08 | 3 |
brain | 8.33e-08 | 47 |
future brain | 8.33e-08 | 47 |
segmental subdivision of hindbrain | 1.58e-07 | 6 |
segmental subdivision of nervous system | 1.58e-07 | 6 |
hindbrain | 1.58e-07 | 6 |
presumptive hindbrain | 1.58e-07 | 6 |
regional part of brain | 7.05e-07 | 46 |