FFCP PHASE1:Hg19::chr1:145096387..145096477,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000048!6.55e-27!430;CL:0000723!6.04e-25!436;CL:0000034!7.53e-22!444;CL:0000055!1.48e-20!180;CL:0000680!6.49e-18!57;CL:0000056!6.49e-18!57;CL:0000355!6.49e-18!57;CL:0000187!1.52e-16!54;CL:0000192!1.76e-14!42;CL:0000514!1.76e-14!42;CL:0002320!3.41e-14!365;CL:0000134!2.20e-13!358;CL:0000183!2.93e-13!59;CL:0000359!7.13e-13!32;CL:0000057!1.25e-12!75;CL:0000393!7.75e-12!60;CL:0000211!7.75e-12!60;CL:0002371!1.28e-10!591;CL:0000144!3.77e-10!625;CL:0000222!8.36e-10!119;CL:0000219!1.30e-09!390;CL:0000839!7.52e-09!70;CL:0000766!1.12e-08!76;CL:0002194!2.16e-08!63;CL:0000576!2.16e-08!63;CL:0000040!2.16e-08!63;CL:0000559!2.16e-08!63;CL:0002009!1.08e-07!65;CL:0000548!1.59e-07!679;CL:0000004!1.59e-07!679;CL:0000255!1.59e-07!679;CL:0000557!2.65e-07!71;CL:0002057!3.08e-07!42;CL:0000012!3.65e-07!682;CL:0000860!4.20e-07!45 | |ontology_enrichment_celltype=CL:0000048!6.55e-27!430;CL:0000723!6.04e-25!436;CL:0000034!7.53e-22!444;CL:0000055!1.48e-20!180;CL:0000680!6.49e-18!57;CL:0000056!6.49e-18!57;CL:0000355!6.49e-18!57;CL:0000187!1.52e-16!54;CL:0000192!1.76e-14!42;CL:0000514!1.76e-14!42;CL:0002320!3.41e-14!365;CL:0000134!2.20e-13!358;CL:0000183!2.93e-13!59;CL:0000359!7.13e-13!32;CL:0000057!1.25e-12!75;CL:0000393!7.75e-12!60;CL:0000211!7.75e-12!60;CL:0002371!1.28e-10!591;CL:0000144!3.77e-10!625;CL:0000222!8.36e-10!119;CL:0000219!1.30e-09!390;CL:0000839!7.52e-09!70;CL:0000766!1.12e-08!76;CL:0002194!2.16e-08!63;CL:0000576!2.16e-08!63;CL:0000040!2.16e-08!63;CL:0000559!2.16e-08!63;CL:0002009!1.08e-07!65;CL:0000548!1.59e-07!679;CL:0000004!1.59e-07!679;CL:0000255!1.59e-07!679;CL:0000557!2.65e-07!71;CL:0002057!3.08e-07!42;CL:0000012!3.65e-07!682;CL:0000860!4.20e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.26e-12;33!CL:0002057;2.26e-12;33!CL:0000359;3.90e-12;32!CL:0000473;4.57e-12;39!CL:0000234;4.57e-12;39!CL:0000192;1.07e-10;43!CL:0000187;2.18e-09;55!CL:0000134;8.85e-09;55!CL:0000723;1.09e-07;61!CL:0000048;1.11e-07;58!CL:0000393;8.91e-07;61!CL:0000211;8.91e-07;61 | |ontology_enrichment_celltype_v019=CL:0000860;2.26e-12;33!CL:0002057;2.26e-12;33!CL:0000359;3.90e-12;32!CL:0000473;4.57e-12;39!CL:0000234;4.57e-12;39!CL:0000192;1.07e-10;43!CL:0000187;2.18e-09;55!CL:0000134;8.85e-09;55!CL:0000723;1.09e-07;61!CL:0000048;1.11e-07;58!CL:0000393;8.91e-07;61!CL:0000211;8.91e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.19e-27,427;CL:0000723,3.06e-25,433;CL:0000034,4.05e-22,441;CL:0000680,5.24e-18,58;CL:0000056,5.24e-18,58;CL:0000355,5.24e-18,58;CL:0000187,1.22e-16,55;CL:0000192,1.47e-14,43;CL:0000514,1.47e-14,43;CL:0002320,2.70e-14,361;CL:0000134,1.74e-13,354;CL:0000057,6.42e-13,76;CL:0000359,7.13e-13,32;CL:0000393,5.88e-12,61;CL:0000211,5.88e-12,61;CL:0000219,1.12e-09,386;CL:0000222,1.24e-09,121;CL:0000473,4.40e-09,48;CL:0000234,4.40e-09,48;CL:0000839,1.15e-08,66;CL:0000766,1.77e-08,72;CL:0002194,3.22e-08,59;CL:0000576,3.22e-08,59;CL:0000040,3.22e-08,59;CL:0000559,3.22e-08,59;CL:0002009,1.68e-07,61;CL:0000860,3.08e-07,42;CL:0002057,3.08e-07,42;CL:0000557,4.25e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-10;43!CL:0000355;1.69e-09;58 | |ontology_enrichment_development_v019=CL:0000514;1.07e-10;43!CL:0000355;1.69e-09;58 | ||
|ontology_enrichment_disease=DOID:2394!7.84e-07!14 | |ontology_enrichment_disease=DOID:2394!7.84e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.77e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;7.77e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,7.84e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.23e-24!167;UBERON:0000914!3.54e-18!83;UBERON:0002329!3.54e-18!83;UBERON:0003077!3.54e-18!83;UBERON:0003059!3.54e-18!83;UBERON:0007282!3.54e-18!83;UBERON:0009618!3.54e-18!83;UBERON:0007285!3.54e-18!83;UBERON:0004290!9.51e-17!70;UBERON:0001134!2.55e-15!61;UBERON:0002036!2.55e-15!61;UBERON:0003082!2.55e-15!61;UBERON:0002385!9.01e-15!63;UBERON:0001015!9.01e-15!63;UBERON:0000383!9.01e-15!63;UBERON:0002384!6.16e-14!375;UBERON:0000486!1.50e-12!82;UBERON:0005256!4.18e-11!143;UBERON:0000926!1.26e-09!448;UBERON:0004120!1.26e-09!448;UBERON:0006603!1.26e-09!448;UBERON:0004765!3.56e-09!101;UBERON:0001434!3.56e-09!101;UBERON:0002371!9.46e-09!80;UBERON:0001637!1.37e-08!42;UBERON:0003509!1.37e-08!42;UBERON:0004572!1.37e-08!42;UBERON:0004573!2.63e-08!33;UBERON:0004571!2.63e-08!33;UBERON:0001474!8.53e-08!86;UBERON:0003081!3.55e-07!216;UBERON:0000490!3.95e-07!138 | |ontology_enrichment_uberon=UBERON:0002204!5.23e-24!167;UBERON:0000914!3.54e-18!83;UBERON:0002329!3.54e-18!83;UBERON:0003077!3.54e-18!83;UBERON:0003059!3.54e-18!83;UBERON:0007282!3.54e-18!83;UBERON:0009618!3.54e-18!83;UBERON:0007285!3.54e-18!83;UBERON:0004290!9.51e-17!70;UBERON:0001134!2.55e-15!61;UBERON:0002036!2.55e-15!61;UBERON:0003082!2.55e-15!61;UBERON:0002385!9.01e-15!63;UBERON:0001015!9.01e-15!63;UBERON:0000383!9.01e-15!63;UBERON:0002384!6.16e-14!375;UBERON:0000486!1.50e-12!82;UBERON:0005256!4.18e-11!143;UBERON:0000926!1.26e-09!448;UBERON:0004120!1.26e-09!448;UBERON:0006603!1.26e-09!448;UBERON:0004765!3.56e-09!101;UBERON:0001434!3.56e-09!101;UBERON:0002371!9.46e-09!80;UBERON:0001637!1.37e-08!42;UBERON:0003509!1.37e-08!42;UBERON:0004572!1.37e-08!42;UBERON:0004573!2.63e-08!33;UBERON:0004571!2.63e-08!33;UBERON:0001474!8.53e-08!86;UBERON:0003081!3.55e-07!216;UBERON:0000490!3.95e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.24e-07;33!UBERON:0004571;2.24e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0004573;2.24e-07;33!UBERON:0004571;2.24e-07;33 | ||
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1924877,74.0687560414977,78.5392806142921 | ||
|short_description=p1@SEC22B | |short_description=p1@SEC22B | ||
}} | }} |
Revision as of 05:06, 18 November 2012
Short description: | p1@SEC22B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SEC22B_5end |
Coexpression cluster: | C3859_CD14_Fibroblast_Preadipocyte_Smooth_leiomyoma_tenocyte_Myoblast |
Association with transcript: | 0bp_to_NM_004892, uc001eml.1_5end |
EntrezGene: | SEC22B |
HGNC: | 10700 |
UniProt: | O75396 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.19e-27 | 427 |
somatic stem cell | 3.06e-25 | 433 |
stem cell | 4.05e-22 | 441 |
muscle precursor cell | 5.24e-18 | 58 |
myoblast | 5.24e-18 | 58 |
multi-potent skeletal muscle stem cell | 5.24e-18 | 58 |
muscle cell | 1.22e-16 | 55 |
smooth muscle cell | 1.47e-14 | 43 |
smooth muscle myoblast | 1.47e-14 | 43 |
connective tissue cell | 2.70e-14 | 361 |
mesenchymal cell | 1.74e-13 | 354 |
fibroblast | 6.42e-13 | 76 |
vascular associated smooth muscle cell | 7.13e-13 | 32 |
electrically responsive cell | 5.88e-12 | 61 |
electrically active cell | 5.88e-12 | 61 |
motile cell | 1.12e-09 | 386 |
mesodermal cell | 1.24e-09 | 121 |
defensive cell | 4.40e-09 | 48 |
phagocyte | 4.40e-09 | 48 |
myeloid lineage restricted progenitor cell | 1.15e-08 | 66 |
myeloid leukocyte | 1.77e-08 | 72 |
monopoietic cell | 3.22e-08 | 59 |
monocyte | 3.22e-08 | 59 |
monoblast | 3.22e-08 | 59 |
promonocyte | 3.22e-08 | 59 |
macrophage dendritic cell progenitor | 1.68e-07 | 61 |
classical monocyte | 3.08e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-07 | 42 |
granulocyte monocyte progenitor cell | 4.25e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.84e-07 | 14 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.