FFCP PHASE1:Hg19::chr10:134260508..134260546,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!3.61e-11!254;CL:0000223!2.02e-09!59;CL:0002076!5.02e-09!43;CL:0000791!3.08e-07!18;CL:0000789!3.08e-07!18;CL:0002420!3.08e-07!18;CL:0002419!3.08e-07!18;CL:0000790!3.08e-07!18;CL:0000037!4.66e-07!172;CL:0000566!4.66e-07!172;CL:0002368!8.74e-07!13;CL:0000988!9.49e-07!182 | |ontology_enrichment_celltype=CL:0000066!3.61e-11!254;CL:0000223!2.02e-09!59;CL:0002076!5.02e-09!43;CL:0000791!3.08e-07!18;CL:0000789!3.08e-07!18;CL:0002420!3.08e-07!18;CL:0002419!3.08e-07!18;CL:0000790!3.08e-07!18;CL:0000037!4.66e-07!172;CL:0000566!4.66e-07!172;CL:0002368!8.74e-07!13;CL:0000988!9.49e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.50e-08;13!CL:0002159;1.54e-07;14!CL:0002076;1.73e-07;42!CL:0000240;2.36e-07;6!CL:0000311;2.36e-07;6!CL:0000079;2.36e-07;6!CL:0000237;2.36e-07;6!CL:0002577;4.49e-07;3 | |ontology_enrichment_celltype_v019=CL:0002368;1.50e-08;13!CL:0002159;1.54e-07;14!CL:0002076;1.73e-07;42!CL:0000240;2.36e-07;6!CL:0000311;2.36e-07;6!CL:0000079;2.36e-07;6!CL:0000237;2.36e-07;6!CL:0002577;4.49e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.59e-12,253;CL:0002076,9.36e-10,42;CL:0002368,8.63e-09,13;CL:0000223,1.58e-08,58;CL:0002159,1.83e-07,14;CL:0000240,3.30e-07,6;CL:0000311,3.30e-07,6;CL:0000079,3.30e-07,6;CL:0000237,3.30e-07,6;CL:0000036,3.30e-07,6;CL:0000357,3.30e-07,6;CL:0000114,3.30e-07,6;CL:0002577,3.78e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;2.36e-07;6!CL:0000114;2.36e-07;6 | |ontology_enrichment_development_v019=CL:0000357;2.36e-07;6!CL:0000114;2.36e-07;6 | ||
|ontology_enrichment_disease=DOID:305!1.23e-14!106;DOID:162!3.85e-14!235;DOID:14566!4.78e-13!239;DOID:1240!5.07e-12!39;DOID:8692!3.64e-11!31;DOID:2531!8.80e-10!51;DOID:0060083!8.80e-10!51;DOID:1749!4.94e-09!14;DOID:0050687!7.22e-09!143;DOID:0050686!2.18e-07!137 | |ontology_enrichment_disease=DOID:305!1.23e-14!106;DOID:162!3.85e-14!235;DOID:14566!4.78e-13!239;DOID:1240!5.07e-12!39;DOID:8692!3.64e-11!31;DOID:2531!8.80e-10!51;DOID:0060083!8.80e-10!51;DOID:1749!4.94e-09!14;DOID:0050687!7.22e-09!143;DOID:0050686!2.18e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.10e-09;14!DOID:8692;3.77e-07;31 | |ontology_enrichment_disease_v019=DOID:1749;1.10e-09;14!DOID:8692;3.77e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.95e-11,106;DOID:1749,1.56e-09,14;DOID:162,6.49e-08,235;DOID:14566,1.71e-07,239;DOID:8692,2.59e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.42e-11!169;UBERON:0000925!1.42e-11!169;UBERON:0006595!1.42e-11!169;UBERON:0000065!3.40e-11!53;UBERON:0000077!7.26e-10!130;UBERON:0001004!1.33e-09!72;UBERON:0001041!2.51e-09!98;UBERON:0000072!3.42e-09!46;UBERON:0004921!8.04e-09!129;UBERON:0004185!8.04e-09!129;UBERON:0001557!2.52e-08!19;UBERON:0001007!4.38e-08!155;UBERON:0001555!4.38e-08!155;UBERON:0007026!4.38e-08!155;UBERON:0008947!9.46e-08!38;UBERON:0003258!9.46e-08!38;UBERON:0001737!2.05e-07!9 | |ontology_enrichment_uberon=UBERON:0004119!1.42e-11!169;UBERON:0000925!1.42e-11!169;UBERON:0006595!1.42e-11!169;UBERON:0000065!3.40e-11!53;UBERON:0000077!7.26e-10!130;UBERON:0001004!1.33e-09!72;UBERON:0001041!2.51e-09!98;UBERON:0000072!3.42e-09!46;UBERON:0004921!8.04e-09!129;UBERON:0004185!8.04e-09!129;UBERON:0001557!2.52e-08!19;UBERON:0001007!4.38e-08!155;UBERON:0001555!4.38e-08!155;UBERON:0007026!4.38e-08!155;UBERON:0008947!9.46e-08!38;UBERON:0003258!9.46e-08!38;UBERON:0001737!2.05e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.57e-11;9!UBERON:0001557;1.57e-11;9!UBERON:0000065;1.16e-08;44!UBERON:0000072;6.18e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.57e-11;9!UBERON:0001557;1.57e-11;9!UBERON:0000065;1.16e-08;44!UBERON:0000072;6.18e-07;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.91e-12,9;UBERON:0000065,6.73e-10,54;UBERON:0001557,3.93e-09,19;UBERON:0000072,2.57e-08,47;UBERON:0001004,3.49e-08,74;UBERON:0008947,9.74e-08,38;UBERON:0003258,9.74e-08,38;UBERON:0004119,6.21e-07,160;UBERON:0000925,6.21e-07,160;UBERON:0006595,6.21e-07,160;UBERON:0005631,6.31e-07,14;UBERON:0000158,6.31e-07,14 | |||
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| ||
|short_description=p@chr10:134260508..134260546,+ | |short_description=p@chr10:134260508..134260546,+ | ||
}} | }} |
Revision as of 08:00, 19 November 2012
Short description: | p@chr10:134260508..134260546, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:134260508..134260546, + |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.59e-12 | 253 |
endo-epithelial cell | 9.36e-10 | 42 |
respiratory epithelial cell | 8.63e-09 | 13 |
endodermal cell | 1.58e-08 | 58 |
general ecto-epithelial cell | 1.83e-07 | 14 |
stratified squamous epithelial cell | 3.30e-07 | 6 |
keratin accumulating cell | 3.30e-07 | 6 |
stratified epithelial cell | 3.30e-07 | 6 |
keratinizing barrier epithelial cell | 3.30e-07 | 6 |
epithelial fate stem cell | 3.30e-07 | 6 |
stratified epithelial stem cell | 3.30e-07 | 6 |
surface ectodermal cell | 3.30e-07 | 6 |
placental epithelial cell | 3.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.91e-12 | 9 |
respiratory tract | 6.73e-10 | 54 |
upper respiratory tract | 3.93e-09 | 19 |
segment of respiratory tract | 2.57e-08 | 47 |
respiratory system | 3.49e-08 | 74 |
respiratory primordium | 9.74e-08 | 38 |
endoderm of foregut | 9.74e-08 | 38 |
endoderm-derived structure | 6.21e-07 | 160 |
endoderm | 6.21e-07 | 160 |
presumptive endoderm | 6.21e-07 | 160 |
extraembryonic membrane | 6.31e-07 | 14 |
membranous layer | 6.31e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.95e-11 | 106 |
squamous cell carcinoma | 1.56e-09 | 14 |
cancer | 6.49e-08 | 235 |
disease of cellular proliferation | 1.71e-07 | 239 |
myeloid leukemia | 2.59e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.