FFCP PHASE1:Hg19::chr12:111843914..111843958,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000048!2.74e-18!430;CL:0000723!1.33e-16!436;CL:0000034!4.51e-16!444;CL:0000115!7.99e-16!35;CL:0002139!4.30e-15!24;CL:0000222!5.65e-13!119;CL:0002078!1.20e-12!44;CL:0000071!6.47e-12!18;CL:0002546!6.47e-12!18;CL:0002320!7.40e-12!365;CL:0000134!1.79e-11!358;CL:0002371!2.93e-11!591;CL:0000213!2.09e-09!57;CL:0000215!2.09e-09!57;CL:0000219!1.80e-08!390;CL:0000144!2.67e-08!625;CL:0000738!2.77e-07!140;CL:0000988!2.86e-07!182;CL:0000791!4.03e-07!18;CL:0000789!4.03e-07!18;CL:0002420!4.03e-07!18;CL:0002419!4.03e-07!18;CL:0000790!4.03e-07!18;CL:0000055!5.55e-07!180 | |ontology_enrichment_celltype=CL:0000048!2.74e-18!430;CL:0000723!1.33e-16!436;CL:0000034!4.51e-16!444;CL:0000115!7.99e-16!35;CL:0002139!4.30e-15!24;CL:0000222!5.65e-13!119;CL:0002078!1.20e-12!44;CL:0000071!6.47e-12!18;CL:0002546!6.47e-12!18;CL:0002320!7.40e-12!365;CL:0000134!1.79e-11!358;CL:0002371!2.93e-11!591;CL:0000213!2.09e-09!57;CL:0000215!2.09e-09!57;CL:0000219!1.80e-08!390;CL:0000144!2.67e-08!625;CL:0000738!2.77e-07!140;CL:0000988!2.86e-07!182;CL:0000791!4.03e-07!18;CL:0000789!4.03e-07!18;CL:0002420!4.03e-07!18;CL:0002419!4.03e-07!18;CL:0000790!4.03e-07!18;CL:0000055!5.55e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.36e-15;24!CL:0000115;9.60e-14;36!CL:0000071;2.78e-12;18!CL:0002078;1.52e-08;45!CL:0000791;2.41e-07;18!CL:0000789;2.41e-07;18!CL:0002419;2.41e-07;18!CL:0000213;9.92e-07;58!CL:0000215;9.92e-07;58!CL:1000413;9.97e-07;9 | |ontology_enrichment_celltype_v019=CL:0002139;1.36e-15;24!CL:0000115;9.60e-14;36!CL:0000071;2.78e-12;18!CL:0002078;1.52e-08;45!CL:0000791;2.41e-07;18!CL:0000789;2.41e-07;18!CL:0002419;2.41e-07;18!CL:0000213;9.92e-07;58!CL:0000215;9.92e-07;58!CL:1000413;9.97e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.23e-18,427;CL:0000723,1.11e-16,433;CL:0000115,2.81e-16,36;CL:0000034,3.04e-16,441;CL:0002139,1.84e-15,24;CL:0000222,2.69e-13,121;CL:0002078,1.05e-12,45;CL:0000071,3.37e-12,18;CL:0002546,3.37e-12,18;CL:0002320,5.60e-12,361;CL:0000134,1.37e-11,354;CL:0000213,5.82e-10,58;CL:0000215,5.82e-10,58;CL:0000219,9.45e-09,386;CL:0000738,1.42e-07,136;CL:0000791,2.88e-07,18;CL:0000789,2.88e-07,18;CL:0002420,2.88e-07,18;CL:0002419,2.88e-07,18;CL:0000790,2.88e-07,18;CL:0000988,3.94e-07,177;CL:0000037,8.57e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002546;2.78e-12;18!CL:0000790;2.41e-07;18 | |ontology_enrichment_development_v019=CL:0002546;2.78e-12;18!CL:0000790;2.41e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!9.16e-24!113;UBERON:0004535!1.19e-23!110;UBERON:0000055!1.40e-18!69;UBERON:0002049!1.89e-16!79;UBERON:0007798!1.89e-16!79;UBERON:0003081!6.61e-16!216;UBERON:0001981!1.72e-15!60;UBERON:0007500!1.72e-15!60;UBERON:0004537!1.72e-15!60;UBERON:0006965!1.72e-15!60;UBERON:0004872!2.14e-15!84;UBERON:0001986!6.47e-12!18;UBERON:0004638!6.47e-12!18;UBERON:0004852!6.47e-12!18;UBERON:0002384!1.63e-11!375;UBERON:0003914!1.14e-10!118;UBERON:0001637!7.64e-10!42;UBERON:0003509!7.64e-10!42;UBERON:0004572!7.64e-10!42;UBERON:0000487!1.51e-09!22;UBERON:0006914!3.41e-09!25;UBERON:0002193!7.26e-08!112;UBERON:0004573!2.92e-07!33;UBERON:0004571!2.92e-07!33 | |ontology_enrichment_uberon=UBERON:0001009!9.16e-24!113;UBERON:0004535!1.19e-23!110;UBERON:0000055!1.40e-18!69;UBERON:0002049!1.89e-16!79;UBERON:0007798!1.89e-16!79;UBERON:0003081!6.61e-16!216;UBERON:0001981!1.72e-15!60;UBERON:0007500!1.72e-15!60;UBERON:0004537!1.72e-15!60;UBERON:0006965!1.72e-15!60;UBERON:0004872!2.14e-15!84;UBERON:0001986!6.47e-12!18;UBERON:0004638!6.47e-12!18;UBERON:0004852!6.47e-12!18;UBERON:0002384!1.63e-11!375;UBERON:0003914!1.14e-10!118;UBERON:0001637!7.64e-10!42;UBERON:0003509!7.64e-10!42;UBERON:0004572!7.64e-10!42;UBERON:0000487!1.51e-09!22;UBERON:0006914!3.41e-09!25;UBERON:0002193!7.26e-08!112;UBERON:0004573!2.92e-07!33;UBERON:0004571!2.92e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.78e-12;18!UBERON:0001986;2.78e-12;18!UBERON:0004852;2.78e-12;18!UBERON:0000487;6.69e-10;22!UBERON:0000055;1.38e-09;65!UBERON:0006914;3.96e-09;25!UBERON:0007500;1.22e-08;56!UBERON:0001981;1.22e-08;56!UBERON:0004537;1.22e-08;56!UBERON:0001637;7.00e-08;42!UBERON:0003509;7.00e-08;42!UBERON:0004572;7.00e-08;42!UBERON:0002193;9.85e-08;42!UBERON:0004535;1.21e-07;109!UBERON:0003914;4.60e-07;74!UBERON:0001009;6.77e-07;112!UBERON:0002049;9.62e-07;75!UBERON:0007798;9.62e-07;75!UBERON:0003915;9.97e-07;9!UBERON:0004700;9.97e-07;9!UBERON:0001917;9.97e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0004638;2.78e-12;18!UBERON:0001986;2.78e-12;18!UBERON:0004852;2.78e-12;18!UBERON:0000487;6.69e-10;22!UBERON:0000055;1.38e-09;65!UBERON:0006914;3.96e-09;25!UBERON:0007500;1.22e-08;56!UBERON:0001981;1.22e-08;56!UBERON:0004537;1.22e-08;56!UBERON:0001637;7.00e-08;42!UBERON:0003509;7.00e-08;42!UBERON:0004572;7.00e-08;42!UBERON:0002193;9.85e-08;42!UBERON:0004535;1.21e-07;109!UBERON:0003914;4.60e-07;74!UBERON:0001009;6.77e-07;112!UBERON:0002049;9.62e-07;75!UBERON:0007798;9.62e-07;75!UBERON:0003915;9.97e-07;9!UBERON:0004700;9.97e-07;9!UBERON:0001917;9.97e-07;9 | ||
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| ||
|short_description=p2@SH2B3 | |short_description=p2@SH2B3 | ||
}} | }} |
Revision as of 13:00, 19 November 2012
Short description: | p2@SH2B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SH2B3_5end |
Coexpression cluster: | NA |
Association with transcript: | 162bp_to_ENST00000341259, NM_005475, uc001tse.2_5end |
EntrezGene: | SH2B3 |
HGNC: | 29605 |
UniProt: | Q9UQQ2Q59H48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.23e-18 | 427 |
somatic stem cell | 1.11e-16 | 433 |
endothelial cell | 2.81e-16 | 36 |
stem cell | 3.04e-16 | 441 |
endothelial cell of vascular tree | 1.84e-15 | 24 |
mesodermal cell | 2.69e-13 | 121 |
meso-epithelial cell | 1.05e-12 | 45 |
blood vessel endothelial cell | 3.37e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.37e-12 | 18 |
connective tissue cell | 5.60e-12 | 361 |
mesenchymal cell | 1.37e-11 | 354 |
lining cell | 5.82e-10 | 58 |
barrier cell | 5.82e-10 | 58 |
motile cell | 9.45e-09 | 386 |
leukocyte | 1.42e-07 | 136 |
mature alpha-beta T cell | 2.88e-07 | 18 |
alpha-beta T cell | 2.88e-07 | 18 |
immature T cell | 2.88e-07 | 18 |
mature T cell | 2.88e-07 | 18 |
immature alpha-beta T cell | 2.88e-07 | 18 |
hematopoietic cell | 3.94e-07 | 177 |
hematopoietic stem cell | 8.57e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 2.22e-24 | 112 |
cardiovascular system | 2.90e-24 | 109 |
vessel | 3.13e-19 | 68 |
lateral plate mesoderm | 8.34e-18 | 203 |
vasculature | 7.17e-17 | 78 |
vascular system | 7.17e-17 | 78 |
splanchnic layer of lateral plate mesoderm | 2.06e-16 | 83 |
epithelial tube open at both ends | 4.79e-16 | 59 |
blood vessel | 4.79e-16 | 59 |
blood vasculature | 4.79e-16 | 59 |
vascular cord | 4.79e-16 | 59 |
blood vessel endothelium | 3.37e-12 | 18 |
endothelium | 3.37e-12 | 18 |
cardiovascular system endothelium | 3.37e-12 | 18 |
mesoderm | 3.83e-12 | 315 |
mesoderm-derived structure | 3.83e-12 | 315 |
presumptive mesoderm | 3.83e-12 | 315 |
connective tissue | 1.15e-11 | 371 |
epithelial tube | 4.96e-11 | 117 |
simple squamous epithelium | 5.28e-10 | 22 |
artery | 7.15e-10 | 42 |
arterial blood vessel | 7.15e-10 | 42 |
arterial system | 7.15e-10 | 42 |
squamous epithelium | 2.25e-09 | 25 |
hemolymphoid system | 1.44e-08 | 108 |
epithelial vesicle | 3.52e-08 | 78 |
systemic artery | 3.12e-07 | 33 |
systemic arterial system | 3.12e-07 | 33 |
musculoskeletal system | 7.85e-07 | 167 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.