FFCP PHASE1:Mm9::chr1:162237551..162237568,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=382|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:162237551..162237568,-|id=chr1:162237551..162237568,-|ontology_enrichment_celltype=CL:0000988!2.53e-10!32;CL:0002032!2.53e-10!32;CL:0000037!2.53e-10!32;CL:0000566!2.53e-10!32;CL:0000837!2.53e-10!32;CL:0000542!6.22e-09!13;CL:0000051!6.22e-09!13;CL:0000838!7.36e-09!12;CL:0000084!3.23e-08!11;CL:0000827!3.23e-08!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.50e-18,32;CL:0002032,1.50e-18,32;CL:0000037,1.50e-18,32;CL:0000837,1.50e-18,32;CL:0000838,1.89e-12,12;CL:0002320,2.18e-11,46;CL:0000134,2.18e-11,46;CL:0000542,2.41e-11,13;CL:0000051,2.41e-11,13;CL:0000084,4.50e-11,11;CL:0000827,4.50e-11,11;CL:0002031,1.48e-10,25;CL:0000219,5.41e-09,54;CL:0000049,9.59e-09,19;CL:0000738,3.13e-08,17;CL:0002087,3.13e-08,17;CL:0000791,1.56e-07,9;CL:0000789,1.56e-07,9;CL:0002420,1.56e-07,9;CL:0002419,1.56e-07,9;CL:0000790,1.56e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.50e-14!48;UBERON:0004177!3.66e-14!29;UBERON:0002405!4.11e-14!70;UBERON:0002390!9.11e-14!45;UBERON:0003061!9.11e-14!45;UBERON:0005057!1.07e-12!51;UBERON:0001041!5.35e-12!92;UBERON:0003408!1.26e-11!24;UBERON:0002370!3.66e-11!23;UBERON:0000974!3.66e-11!23;UBERON:0004807!3.66e-11!23;UBERON:0005058!3.66e-11!23;UBERON:0003351!3.66e-11!23;UBERON:0009113!3.66e-11!23;UBERON:0003295!3.66e-11!23;UBERON:0009722!3.66e-11!23;UBERON:0005562!3.66e-11!23;UBERON:0007690!3.66e-11!23;UBERON:0000077!6.20e-11!97;UBERON:0006562!2.32e-10!24;UBERON:0001557!2.32e-10!24;UBERON:0001042!2.32e-10!24;UBERON:0008814!2.32e-10!24;UBERON:0009145!2.32e-10!24;UBERON:0001004!1.12e-09!42;UBERON:0005911!2.13e-09!69;UBERON:0000065!2.96e-09!41;UBERON:0000072!2.40e-08!27;UBERON:0001007!3.23e-08!128;UBERON:0001555!3.23e-08!128;UBERON:0007026!3.23e-08!128;UBERON:0004921!3.61e-08!126;UBERON:0004185!3.61e-08!126;UBERON:0003104!5.38e-08!131;UBERON:0009142!5.38e-08!131;UBERON:0003929!6.02e-08!55;UBERON:0004119!8.65e-08!130;UBERON:0000925!8.65e-08!130;UBERON:0006595!8.65e-08!130;UBERON:0003081!1.22e-07!88;UBERON:0002530!4.66e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.32e-22,48;UBERON:0002405,1.32e-22,48;UBERON:0002390,1.71e-22,45;UBERON:0003061,1.71e-22,45;UBERON:0004177,3.13e-19,29;UBERON:0005057,3.13e-19,29;UBERON:0002370,4.66e-18,23;UBERON:0000974,4.66e-18,23;UBERON:0004807,4.66e-18,23;UBERON:0005058,4.66e-18,23;UBERON:0003351,4.66e-18,23;UBERON:0009113,4.66e-18,23;UBERON:0003295,4.66e-18,23;UBERON:0009722,4.66e-18,23;UBERON:0005562,4.66e-18,23;UBERON:0007690,4.66e-18,23;UBERON:0006562,3.90e-17,24;UBERON:0003408,3.90e-17,24;UBERON:0001557,3.90e-17,24;UBERON:0001042,3.90e-17,24;UBERON:0008814,3.90e-17,24;UBERON:0009145,3.90e-17,24;UBERON:0000077,4.22e-15,35;UBERON:0000072,8.84e-15,27;UBERON:0002384,2.18e-11,46;UBERON:0003929,2.18e-11,55;UBERON:0003081,2.98e-10,87;UBERON:0007811,4.26e-10,36;UBERON:0002368,5.44e-10,60;UBERON:0002530,9.29e-10,65;UBERON:0000490,1.32e-08,66;UBERON:0001041,1.36e-08,80;UBERON:0000065,2.11e-08,41;UBERON:0000949,2.67e-08,72;UBERON:0001004,4.10e-08,42;UBERON:0005911,5.26e-08,69;UBERON:0000153,7.72e-08,43|phase1_expression=0,0,0,0,0,0.503637815735669,0,2.7115897922731,1.267098499365,0.936258105287974,0.171217968225505,0.159544317990673,8.04643430676667,6.11942816932982,0.666219523631325,1.01237633694913,0,5.52058789376916,1.7824876368746,2.12194825899015,0.425216450755349,25.6170654098284,24.291580389921,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.8456086666351,2.90144856804538,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,2.84831672011889,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0.144599356919912,1.76922110389975,0,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,12.7004031976275,11.3981518888747,8.00542430560307,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.398068533636986,4.91549231119264,4.11756651383544,4.54661599032948,0.414251545071004,0.469052119962192,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0.605050573870028,0.444756087689741,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,3.17005700860579,1.96558995113203,1.79889689907883,1.82574109249653,0.72353147925725,0.25462585178142,0.287696137450811,2.2698931748505,0.823684239564244,1.43768206527355,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.8858587585951,0.318909537314974,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,1.87957968877638,0.206386867963223,0.555583582109135,1.69531611304222,0.956859594047176,1.14389086603261,9.5187920796559,11.3360676382163,11.8851977471804,0.954670618015114,0.158167996790568,0,0,0.209088296014469,0,0.269728692769641,0.247960367176008,0.785267825952089,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,5.05617793005085,1.62180172232131,1.54066435747241,0.909445760844565,2.14832034800978,2.58285761215644,2.04332264183947,3.2491695978407,3.73575864808146,2.66723823292499,3.52891647978942,4.67797827550812,5.19543944857779,5.02570679380746,0,0,0,0,0,0.187682475451182,0,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.682934423016537,0.729320151204882,0.628839487883947,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p@chr1:162237551..162237568,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=382 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:162237551..162237568,- | |||
|id=chr1:162237551..162237568,- | |||
|ontology_enrichment_celltype=CL:0000988!2.53e-10!32;CL:0002032!2.53e-10!32;CL:0000037!2.53e-10!32;CL:0000566!2.53e-10!32;CL:0000837!2.53e-10!32;CL:0000542!6.22e-09!13;CL:0000051!6.22e-09!13;CL:0000838!7.36e-09!12;CL:0000084!3.23e-08!11;CL:0000827!3.23e-08!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.50e-18,32;CL:0002032,1.50e-18,32;CL:0000037,1.50e-18,32;CL:0000837,1.50e-18,32;CL:0000838,1.89e-12,12;CL:0002320,2.18e-11,46;CL:0000134,2.18e-11,46;CL:0000542,2.41e-11,13;CL:0000051,2.41e-11,13;CL:0000084,4.50e-11,11;CL:0000827,4.50e-11,11;CL:0002031,1.48e-10,25;CL:0000219,5.41e-09,54;CL:0000049,9.59e-09,19;CL:0000738,3.13e-08,17;CL:0002087,3.13e-08,17;CL:0000791,1.56e-07,9;CL:0000789,1.56e-07,9;CL:0002420,1.56e-07,9;CL:0002419,1.56e-07,9;CL:0000790,1.56e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.50e-14!48;UBERON:0004177!3.66e-14!29;UBERON:0002405!4.11e-14!70;UBERON:0002390!9.11e-14!45;UBERON:0003061!9.11e-14!45;UBERON:0005057!1.07e-12!51;UBERON:0001041!5.35e-12!92;UBERON:0003408!1.26e-11!24;UBERON:0002370!3.66e-11!23;UBERON:0000974!3.66e-11!23;UBERON:0004807!3.66e-11!23;UBERON:0005058!3.66e-11!23;UBERON:0003351!3.66e-11!23;UBERON:0009113!3.66e-11!23;UBERON:0003295!3.66e-11!23;UBERON:0009722!3.66e-11!23;UBERON:0005562!3.66e-11!23;UBERON:0007690!3.66e-11!23;UBERON:0000077!6.20e-11!97;UBERON:0006562!2.32e-10!24;UBERON:0001557!2.32e-10!24;UBERON:0001042!2.32e-10!24;UBERON:0008814!2.32e-10!24;UBERON:0009145!2.32e-10!24;UBERON:0001004!1.12e-09!42;UBERON:0005911!2.13e-09!69;UBERON:0000065!2.96e-09!41;UBERON:0000072!2.40e-08!27;UBERON:0001007!3.23e-08!128;UBERON:0001555!3.23e-08!128;UBERON:0007026!3.23e-08!128;UBERON:0004921!3.61e-08!126;UBERON:0004185!3.61e-08!126;UBERON:0003104!5.38e-08!131;UBERON:0009142!5.38e-08!131;UBERON:0003929!6.02e-08!55;UBERON:0004119!8.65e-08!130;UBERON:0000925!8.65e-08!130;UBERON:0006595!8.65e-08!130;UBERON:0003081!1.22e-07!88;UBERON:0002530!4.66e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.32e-22,48;UBERON:0002405,1.32e-22,48;UBERON:0002390,1.71e-22,45;UBERON:0003061,1.71e-22,45;UBERON:0004177,3.13e-19,29;UBERON:0005057,3.13e-19,29;UBERON:0002370,4.66e-18,23;UBERON:0000974,4.66e-18,23;UBERON:0004807,4.66e-18,23;UBERON:0005058,4.66e-18,23;UBERON:0003351,4.66e-18,23;UBERON:0009113,4.66e-18,23;UBERON:0003295,4.66e-18,23;UBERON:0009722,4.66e-18,23;UBERON:0005562,4.66e-18,23;UBERON:0007690,4.66e-18,23;UBERON:0006562,3.90e-17,24;UBERON:0003408,3.90e-17,24;UBERON:0001557,3.90e-17,24;UBERON:0001042,3.90e-17,24;UBERON:0008814,3.90e-17,24;UBERON:0009145,3.90e-17,24;UBERON:0000077,4.22e-15,35;UBERON:0000072,8.84e-15,27;UBERON:0002384,2.18e-11,46;UBERON:0003929,2.18e-11,55;UBERON:0003081,2.98e-10,87;UBERON:0007811,4.26e-10,36;UBERON:0002368,5.44e-10,60;UBERON:0002530,9.29e-10,65;UBERON:0000490,1.32e-08,66;UBERON:0001041,1.36e-08,80;UBERON:0000065,2.11e-08,41;UBERON:0000949,2.67e-08,72;UBERON:0001004,4.10e-08,42;UBERON:0005911,5.26e-08,69;UBERON:0000153,7.72e-08,43 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0,2.7115897922731,1.267098499365,0.936258105287974,0.171217968225505,0.159544317990673,8.04643430676667,6.11942816932982,0.666219523631325,1.01237633694913,0,5.52058789376916,1.7824876368746,2.12194825899015,0.425216450755349,25.6170654098284,24.291580389921,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,1.8456086666351,2.90144856804538,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,2.84831672011889,0,0.173485326766136,0,0,0.150722640552623,0,0,0,0.144599356919912,1.76922110389975,0,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,12.7004031976275,11.3981518888747,8.00542430560307,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.398068533636986,4.91549231119264,4.11756651383544,4.54661599032948,0.414251545071004,0.469052119962192,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0.605050573870028,0.444756087689741,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,3.17005700860579,1.96558995113203,1.79889689907883,1.82574109249653,0.72353147925725,0.25462585178142,0.287696137450811,2.2698931748505,0.823684239564244,1.43768206527355,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0.8858587585951,0.318909537314974,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,1.87957968877638,0.206386867963223,0.555583582109135,1.69531611304222,0.956859594047176,1.14389086603261,9.5187920796559,11.3360676382163,11.8851977471804,0.954670618015114,0.158167996790568,0,0,0.209088296014469,0,0.269728692769641,0.247960367176008,0.785267825952089,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,5.05617793005085,1.62180172232131,1.54066435747241,0.909445760844565,2.14832034800978,2.58285761215644,2.04332264183947,3.2491695978407,3.73575864808146,2.66723823292499,3.52891647978942,4.67797827550812,5.19543944857779,5.02570679380746,0,0,0,0,0,0.187682475451182,0,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.682934423016537,0.729320151204882,0.628839487883947,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr1:162237551..162237568,- | |||
}} |
Revision as of 19:24, 13 September 2013
Short description: | p@chr1:162237551..162237568, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:162237551..162237568, - |
Coexpression cluster: | MCL_coexpression_mm9:382 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.50e-18 | 32 |
hematopoietic oligopotent progenitor cell | 1.50e-18 | 32 |
hematopoietic stem cell | 1.50e-18 | 32 |
hematopoietic multipotent progenitor cell | 1.50e-18 | 32 |
lymphoid lineage restricted progenitor cell | 1.89e-12 | 12 |
connective tissue cell | 2.18e-11 | 46 |
mesenchymal cell | 2.18e-11 | 46 |
lymphocyte | 2.41e-11 | 13 |
common lymphoid progenitor | 2.41e-11 | 13 |
T cell | 4.50e-11 | 11 |
pro-T cell | 4.50e-11 | 11 |
hematopoietic lineage restricted progenitor cell | 1.48e-10 | 25 |
motile cell | 5.41e-09 | 54 |
common myeloid progenitor | 9.59e-09 | 19 |
leukocyte | 3.13e-08 | 17 |
nongranular leukocyte | 3.13e-08 | 17 |
mature alpha-beta T cell | 1.56e-07 | 9 |
alpha-beta T cell | 1.56e-07 | 9 |
immature T cell | 1.56e-07 | 9 |
mature T cell | 1.56e-07 | 9 |
immature alpha-beta T cell | 1.56e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.