FFCP PHASE1:Mm9::chr2:58012525..58012539,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227929|HGNC=|MCL_coexpression_id=36|UniProt=Q91VY6,Q3TCC3,Q3THB7|association_with_transcript=0bp_to_ENSMUST00000146545,NM_139200,uc008jsi.1,uc008jsj.1,uc008jsk.1,uc008jsm.1_5end|description=CAGE_peak_1_at_Cytip_5end|id=chr2:58012525..58012539,-|ontology_enrichment_celltype=CL:0000838!1.28e-08!12;CL:0000988!2.92e-08!32;CL:0002032!2.92e-08!32;CL:0000037!2.92e-08!32;CL:0000566!2.92e-08!32;CL:0000837!2.92e-08!32;CL:0000084!6.18e-08!11;CL:0000827!6.18e-08!11;CL:0000542!1.43e-07!13;CL:0000051!1.43e-07!13;CL:0000791!6.27e-07!9;CL:0000789!6.27e-07!9;CL:0002420!6.27e-07!9;CL:0002419!6.27e-07!9;CL:0000790!6.27e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,3.56e-09,32;CL:0002032,3.56e-09,32;CL:0000037,3.56e-09,32;CL:0000837,3.56e-09,32;CL:0000838,4.07e-09,12;CL:0000084,2.18e-08,11;CL:0000827,2.18e-08,11;CL:0000542,7.34e-08,13;CL:0000051,7.34e-08,13;CL:0000791,2.61e-07,9;CL:0000789,2.61e-07,9;CL:0002420,2.61e-07,9;CL:0002419,2.61e-07,9;CL:0000790,2.61e-07,9;CL:0002031,8.12e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.09e-14!48;UBERON:0002405!2.68e-13!70;UBERON:0002390!1.56e-12!45;UBERON:0003061!1.56e-12!45;UBERON:0000926!1.47e-11!193;UBERON:0004120!1.47e-11!193;UBERON:0006603!1.47e-11!193;UBERON:0004177!2.94e-10!29;UBERON:0000077!3.22e-09!97;UBERON:0005057!3.65e-09!51;UBERON:0001041!9.52e-09!92;UBERON:0004119!1.57e-08!130;UBERON:0000925!1.57e-08!130;UBERON:0006595!1.57e-08!130;UBERON:0001007!1.82e-08!128;UBERON:0001555!1.82e-08!128;UBERON:0007026!1.82e-08!128;UBERON:0003408!4.08e-08!24;UBERON:0003104!4.53e-08!131;UBERON:0009142!4.53e-08!131;UBERON:0004921!7.84e-08!126;UBERON:0004185!7.84e-08!126;UBERON:0002370!8.52e-08!23;UBERON:0000974!8.52e-08!23;UBERON:0004807!8.52e-08!23;UBERON:0005058!8.52e-08!23;UBERON:0003351!8.52e-08!23;UBERON:0009113!8.52e-08!23;UBERON:0003295!8.52e-08!23;UBERON:0009722!8.52e-08!23;UBERON:0005562!8.52e-08!23;UBERON:0007690!8.52e-08!23;UBERON:0001004!1.23e-07!42;UBERON:0006562!1.60e-07!24;UBERON:0001557!1.60e-07!24;UBERON:0001042!1.60e-07!24;UBERON:0008814!1.60e-07!24;UBERON:0009145!1.60e-07!24;UBERON:0000065!2.47e-07!41;UBERON:0003081!2.85e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.67e-15,48;UBERON:0002405,1.67e-15,48;UBERON:0002390,6.84e-14,45;UBERON:0003061,6.84e-14,45;UBERON:0004177,1.84e-11,29;UBERON:0005057,1.84e-11,29;UBERON:0000077,1.18e-10,35;UBERON:0003408,3.82e-09,24;UBERON:0001041,3.98e-09,80;UBERON:0002370,8.45e-09,23;UBERON:0000974,8.45e-09,23;UBERON:0004807,8.45e-09,23;UBERON:0005058,8.45e-09,23;UBERON:0003351,8.45e-09,23;UBERON:0009113,8.45e-09,23;UBERON:0003295,8.45e-09,23;UBERON:0009722,8.45e-09,23;UBERON:0005562,8.45e-09,23;UBERON:0007690,8.45e-09,23;UBERON:0004119,1.23e-08,118;UBERON:0000925,1.23e-08,118;UBERON:0006595,1.23e-08,118;UBERON:0001007,1.41e-08,116;UBERON:0001555,1.41e-08,116;UBERON:0007026,1.41e-08,116;UBERON:0006562,1.75e-08,24;UBERON:0001557,1.75e-08,24;UBERON:0001042,1.75e-08,24;UBERON:0008814,1.75e-08,24;UBERON:0009145,1.75e-08,24;UBERON:0001004,2.23e-08,42;UBERON:0000065,4.73e-08,41;UBERON:0004921,6.57e-08,114;UBERON:0000926,9.62e-08,120;UBERON:0004120,9.62e-08,120;UBERON:0006603,9.62e-08,120|phase1_expression=0.160148847104794,0,0,0,0,0,0,636.707107890413,304.666794736207,360.927499588514,44.8591076750823,38.2906363177615,637.55151826381,690.184077097985,39.6400616560639,61.1475307517274,14.6907994406911,292.591158369765,304.942500339163,301.7410424284,14.9676190665883,111.603029149795,90.1139272529327,45.2778556505341,58.2699573910612,1.14846392823004,0,0.430942465371778,3.6104449696711,7.05684363327806,7.76056787293567,0,0,0,0,0.332469290716985,0.204169356262369,375.841404401743,349.256899002139,243.438540947816,467.644032984656,530.043296327754,298.588867114159,0,0,0,0,0,0,0,0,0,544.454556657354,641.94549568004,542.791485615079,0.257259436035947,0,1.03134418455488,0,0,0,0,0,1.7997994345628,5.93319817540185,2.8419204597844,0.299600110518405,0,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,7.04253597998612,0,0.869593466105033,3.44169550792555,0,0,0.649776417447669,0.448026887097336,16.7128859956785,0,0,0,0,0,0,0,0,0,0,18.1552368753305,340.244379112384,7.12522267511159,0.867426633830679,0.304465478312141,2.30615497256059,3.91878865436819,3.17489509266403,2.51333182659351,1.97755974187499,12.5801440520323,55.7304647728421,4.52947179852746,33.126227769059,37.8202697445473,13.0474232852686,0,0,21.9693067479389,237.59339189524,121.180351660668,153.754974758408,0.449371918214468,0.457500602818626,0.125654352112864,0,0,0.41557608911912,0,0.916554274652847,46.4038000375647,1.0108910337347,1.47309299120532,0.260240885925407,0.689706313300419,0.180062129805349,0.90422890701429,0.408218994907967,0.512454881139399,0.281105173679186,0.517406741478031,0,0.189106080167819,0.703804496655795,0.219195732427575,2.22437799380478,1.0447564995665,2.46938563689532,0.59710280045548,113.056323157431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| ||
|EntrezGene=227929 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=Q91VY6,Q3TCC3,Q3THB7 | |||
|association_with_transcript=0bp_to_ENSMUST00000146545,NM_139200,uc008jsi.1,uc008jsj.1,uc008jsk.1,uc008jsm.1_5end | |||
|description=CAGE_peak_1_at_Cytip_5end | |||
|id=chr2:58012525..58012539,- | |||
|ontology_enrichment_celltype=CL:0000838!1.28e-08!12;CL:0000988!2.92e-08!32;CL:0002032!2.92e-08!32;CL:0000037!2.92e-08!32;CL:0000566!2.92e-08!32;CL:0000837!2.92e-08!32;CL:0000084!6.18e-08!11;CL:0000827!6.18e-08!11;CL:0000542!1.43e-07!13;CL:0000051!1.43e-07!13;CL:0000791!6.27e-07!9;CL:0000789!6.27e-07!9;CL:0002420!6.27e-07!9;CL:0002419!6.27e-07!9;CL:0000790!6.27e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.56e-09,32;CL:0002032,3.56e-09,32;CL:0000037,3.56e-09,32;CL:0000837,3.56e-09,32;CL:0000838,4.07e-09,12;CL:0000084,2.18e-08,11;CL:0000827,2.18e-08,11;CL:0000542,7.34e-08,13;CL:0000051,7.34e-08,13;CL:0000791,2.61e-07,9;CL:0000789,2.61e-07,9;CL:0002420,2.61e-07,9;CL:0002419,2.61e-07,9;CL:0000790,2.61e-07,9;CL:0002031,8.12e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.09e-14!48;UBERON:0002405!2.68e-13!70;UBERON:0002390!1.56e-12!45;UBERON:0003061!1.56e-12!45;UBERON:0000926!1.47e-11!193;UBERON:0004120!1.47e-11!193;UBERON:0006603!1.47e-11!193;UBERON:0004177!2.94e-10!29;UBERON:0000077!3.22e-09!97;UBERON:0005057!3.65e-09!51;UBERON:0001041!9.52e-09!92;UBERON:0004119!1.57e-08!130;UBERON:0000925!1.57e-08!130;UBERON:0006595!1.57e-08!130;UBERON:0001007!1.82e-08!128;UBERON:0001555!1.82e-08!128;UBERON:0007026!1.82e-08!128;UBERON:0003408!4.08e-08!24;UBERON:0003104!4.53e-08!131;UBERON:0009142!4.53e-08!131;UBERON:0004921!7.84e-08!126;UBERON:0004185!7.84e-08!126;UBERON:0002370!8.52e-08!23;UBERON:0000974!8.52e-08!23;UBERON:0004807!8.52e-08!23;UBERON:0005058!8.52e-08!23;UBERON:0003351!8.52e-08!23;UBERON:0009113!8.52e-08!23;UBERON:0003295!8.52e-08!23;UBERON:0009722!8.52e-08!23;UBERON:0005562!8.52e-08!23;UBERON:0007690!8.52e-08!23;UBERON:0001004!1.23e-07!42;UBERON:0006562!1.60e-07!24;UBERON:0001557!1.60e-07!24;UBERON:0001042!1.60e-07!24;UBERON:0008814!1.60e-07!24;UBERON:0009145!1.60e-07!24;UBERON:0000065!2.47e-07!41;UBERON:0003081!2.85e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.67e-15,48;UBERON:0002405,1.67e-15,48;UBERON:0002390,6.84e-14,45;UBERON:0003061,6.84e-14,45;UBERON:0004177,1.84e-11,29;UBERON:0005057,1.84e-11,29;UBERON:0000077,1.18e-10,35;UBERON:0003408,3.82e-09,24;UBERON:0001041,3.98e-09,80;UBERON:0002370,8.45e-09,23;UBERON:0000974,8.45e-09,23;UBERON:0004807,8.45e-09,23;UBERON:0005058,8.45e-09,23;UBERON:0003351,8.45e-09,23;UBERON:0009113,8.45e-09,23;UBERON:0003295,8.45e-09,23;UBERON:0009722,8.45e-09,23;UBERON:0005562,8.45e-09,23;UBERON:0007690,8.45e-09,23;UBERON:0004119,1.23e-08,118;UBERON:0000925,1.23e-08,118;UBERON:0006595,1.23e-08,118;UBERON:0001007,1.41e-08,116;UBERON:0001555,1.41e-08,116;UBERON:0007026,1.41e-08,116;UBERON:0006562,1.75e-08,24;UBERON:0001557,1.75e-08,24;UBERON:0001042,1.75e-08,24;UBERON:0008814,1.75e-08,24;UBERON:0009145,1.75e-08,24;UBERON:0001004,2.23e-08,42;UBERON:0000065,4.73e-08,41;UBERON:0004921,6.57e-08,114;UBERON:0000926,9.62e-08,120;UBERON:0004120,9.62e-08,120;UBERON:0006603,9.62e-08,120 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,636.707107890413,304.666794736207,360.927499588514,44.8591076750823,38.2906363177615,637.55151826381,690.184077097985,39.6400616560639,61.1475307517274,14.6907994406911,292.591158369765,304.942500339163,301.7410424284,14.9676190665883,111.603029149795,90.1139272529327,45.2778556505341,58.2699573910612,1.14846392823004,0,0.430942465371778,3.6104449696711,7.05684363327806,7.76056787293567,0,0,0,0,0.332469290716985,0.204169356262369,375.841404401743,349.256899002139,243.438540947816,467.644032984656,530.043296327754,298.588867114159,0,0,0,0,0,0,0,0,0,544.454556657354,641.94549568004,542.791485615079,0.257259436035947,0,1.03134418455488,0,0,0,0,0,1.7997994345628,5.93319817540185,2.8419204597844,0.299600110518405,0,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,7.04253597998612,0,0.869593466105033,3.44169550792555,0,0,0.649776417447669,0.448026887097336,16.7128859956785,0,0,0,0,0,0,0,0,0,0,18.1552368753305,340.244379112384,7.12522267511159,0.867426633830679,0.304465478312141,2.30615497256059,3.91878865436819,3.17489509266403,2.51333182659351,1.97755974187499,12.5801440520323,55.7304647728421,4.52947179852746,33.126227769059,37.8202697445473,13.0474232852686,0,0,21.9693067479389,237.59339189524,121.180351660668,153.754974758408,0.449371918214468,0.457500602818626,0.125654352112864,0,0,0.41557608911912,0,0.916554274652847,46.4038000375647,1.0108910337347,1.47309299120532,0.260240885925407,0.689706313300419,0.180062129805349,0.90422890701429,0.408218994907967,0.512454881139399,0.281105173679186,0.517406741478031,0,0.189106080167819,0.703804496655795,0.219195732427575,2.22437799380478,1.0447564995665,2.46938563689532,0.59710280045548,113.056323157431,85.1821572549707,83.8282323216998,0.621377317606506,0.703578179943289,0,0.710234206755631,1.37734962223183,0.617068451549513,0.697601834251224,0,1.16765342367169,0.822799249567402,2.79084688934462,2.59420190546738,3.36259971078264,4.39100230582101,2.95254121272818,0,0.205809224758569,11.8950761874167,5.28901133327089,0.213288250535234,0.464473343720877,0.644337306610467,1.4117846723634,0.889512175379481,1.14135375667535,2.37264530772256,2.79988223030818,4.77536896720512,4.57599885694647,4.28920991662064,9.88701349519644,3.6743468478698,6.17337947088538,0.379335801906163,0.799739588268102,0,0.407302655690628,0.387904974335251,1.40271639780637,1.7706230394792,1.77132177575523,1.8839847340965,2.34454611451421,2.66807364378434,2.16898637430922,1.57247196090562,2.24862112384854,3.04290182082754,7.47649195232492,12.2220408855082,10.64475708568,15.4028465436284,9.60964946158285,10.0637744569148,11.5363693777236,6.86482880852033,3.28352541331245,1.79397413521912,2.41221760681684,84.6169610963049,0.189491411770485,0.651859905768103,0.678980343100753,2.34690248288502,6.86775655511445,9.28370199455454,13.6593553500459,18.9162172927429,18.8244986201459,17.6994793209811,52.6001240237519,54.7411392514889,45.7091025117577,1.50791283939272,1.63171705145613,52.1270129400178,44.1498794087572,0.160550589987792,0.586058432961016,0.327869890753351,2.7771801992481,0,0,0,0,0,0,0,0,0,0.321321316421807,3.40656204499845,0.890328018336276,0.977321756121456,6.10389454998381,10.619611067197,0.485561272309963,0,0.565815239267694,1.47650946440386,0.922305443831782,3.10113951801865,2.54473610634254,2.49548164869305,6.63677191665214,4.21674434299995,2.06271086496374,1.02131881726136,0.18006109403131,0,0.214337035031592,0.177340233642274,0.178368817602071,0.658196082408484,0.304464949114599,2.81606049676452,1.69465656691056,3.08739757276947,6.10079135883476,6.13564821444441,2.41251699712623,1.79058516004705,3.44695889464629,11.3677526285642,0.370850604021019,85.0936986373306,20.8450736642855,30.3719024886327,33.7179538038397,72.4479406921433,68.8622301351633,260.236976320592,236.657905879306,253.458751957313,4.77335309007557,0.316335993581135,0.609958401380546,1.72808545314882,0.836353184057875,2.18362563746178,1.61837215661785,2.14898984885873,1.83229159388821,5.05498395837992,17.3975007664339,15.2197093444731,0.747582730219894,0.330916980914195,1.16670713006429,1.29159823477731,2.53434188236167,2.93393096614385,4.6873578543822,11.953965264531,11.5960377996483,7.4887801627045,145.365115488962,12.5689633479902,13.660557302922,24.8148771887588,32.9409120028166,50.8624268240038,99.8824185510941,92.8967125928091,86.9321134053551,72.8537071621798,109.396410873472,142.580879522258,126.999630965235,171.692169304725,1.58711268530648,0,0,0,3.28422309854724,7.69498149349846,3.6630324853453,7.07415650960917,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,1.94485373654635,0.838452650511929,2.02227859295016,2.22246727801615,1.85431551515005,1.28367683836726,1.51618327058278,2.02783439912192,2.26351609663291,1.96647165686753,1.6646539625266,2.29741875822453,1.42888107384922,2.0859178670074,2.70072908649187,1.64834360321323,2.94397840268795,1.71434626192708,2.12970967391205,2.622798089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| |||
|short_description=p1@Cytip | |||
}} |
Revision as of 00:10, 14 September 2013
Short description: | p1@Cytip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cytip_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000146545, NM_139200, uc008jsi.1, uc008jsj.1, uc008jsk.1, uc008jsm.1_5end |
EntrezGene: | Cytip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.56e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.56e-09 | 32 |
hematopoietic stem cell | 3.56e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.56e-09 | 32 |
lymphoid lineage restricted progenitor cell | 4.07e-09 | 12 |
T cell | 2.18e-08 | 11 |
pro-T cell | 2.18e-08 | 11 |
lymphocyte | 7.34e-08 | 13 |
common lymphoid progenitor | 7.34e-08 | 13 |
mature alpha-beta T cell | 2.61e-07 | 9 |
alpha-beta T cell | 2.61e-07 | 9 |
immature T cell | 2.61e-07 | 9 |
mature T cell | 2.61e-07 | 9 |
immature alpha-beta T cell | 2.61e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 8.12e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.