FFCP PHASE1:Mm9::chr2:174439846..174439871,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=33|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:174439846..174439871,-|id=chr2:174439846..174439871,-|ontology_enrichment_celltype=CL:0000084!7.96e-14!11;CL:0000827!7.96e-14!11;CL:0000838!2.02e-12!12;CL:0000791!3.52e-12!9;CL:0000789!3.52e-12!9;CL:0002420!3.52e-12!9;CL:0002419!3.52e-12!9;CL:0000790!3.52e-12!9;CL:0000542!3.09e-11!13;CL:0000051!3.09e-11!13;CL:0000624!3.57e-11!8;CL:0002031!1.37e-10!25;CL:0000893!2.12e-08!6;CL:0002489!2.12e-08!6;CL:0000898!2.12e-08!6;CL:0000809!2.12e-08!6;CL:0000810!2.12e-08!6;CL:0000895!2.12e-08!6;CL:0000808!2.12e-08!6;CL:0000894!2.12e-08!6;CL:0000806!2.12e-08!6;CL:0000807!2.12e-08!6;CL:0000805!2.12e-08!6;CL:0002425!2.12e-08!6;CL:0002436!2.12e-08!6;CL:0002427!2.12e-08!6;CL:0002428!2.12e-08!6;CL:0002429!2.12e-08!6;CL:0002433!2.12e-08!6;CL:0002431!2.12e-08!6;CL:0002432!2.12e-08!6;CL:0000738!6.45e-08!17;CL:0002087!6.45e-08!17;CL:0000988!2.53e-07!32;CL:0002032!2.53e-07!32;CL:0000037!2.53e-07!32;CL:0000566!2.53e-07!32;CL:0000837!2.53e-07!32|ontology_enrichment_celltype_v019_2=CL:0000624,3.17e-12,8;CL:0000791,6.81e-11,9;CL:0000789,6.81e-11,9;CL:0002420,6.81e-11,9;CL:0002419,6.81e-11,9;CL:0000790,6.81e-11,9;CL:0000084,5.98e-09,11;CL:0000827,5.98e-09,11;CL:0000838,3.22e-08,12;CL:0000542,1.34e-07,13;CL:0000051,1.34e-07,13;CL:0000815,1.38e-07,1;CL:0000792,1.38e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.62e-29!29;UBERON:0002390!7.32e-24!45;UBERON:0003061!7.32e-24!45;UBERON:0002193!1.15e-23!48;UBERON:0002370!1.03e-22!23;UBERON:0000974!1.03e-22!23;UBERON:0004807!1.03e-22!23;UBERON:0005058!1.03e-22!23;UBERON:0003351!1.03e-22!23;UBERON:0009113!1.03e-22!23;UBERON:0003295!1.03e-22!23;UBERON:0009722!1.03e-22!23;UBERON:0005562!1.03e-22!23;UBERON:0007690!1.03e-22!23;UBERON:0006562!1.74e-21!24;UBERON:0003408!1.74e-21!24;UBERON:0001557!1.74e-21!24;UBERON:0001042!1.74e-21!24;UBERON:0008814!1.74e-21!24;UBERON:0009145!1.74e-21!24;UBERON:0005057!2.94e-19!51;UBERON:0002405!1.24e-18!70;UBERON:0000072!2.34e-18!27;UBERON:0003081!3.36e-14!88;UBERON:0000065!6.06e-14!41;UBERON:0001004!1.94e-13!42;UBERON:0001041!3.81e-13!92;UBERON:0000063!1.09e-12!35;UBERON:0002530!6.16e-12!65;UBERON:0000077!6.74e-12!97;UBERON:0002368!2.01e-11!60;UBERON:0003929!4.34e-10!55;UBERON:0005911!3.48e-09!69;UBERON:0003104!4.71e-09!131;UBERON:0009142!4.71e-09!131;UBERON:0000949!4.94e-09!72;UBERON:0004921!1.21e-08!126;UBERON:0004185!1.21e-08!126;UBERON:0001007!2.46e-08!128;UBERON:0001555!2.46e-08!128;UBERON:0007026!2.46e-08!128;UBERON:0000926!2.90e-08!193;UBERON:0004120!2.90e-08!193;UBERON:0006603!2.90e-08!193;UBERON:0004119!4.88e-08!130;UBERON:0000925!4.88e-08!130;UBERON:0006595!4.88e-08!130;UBERON:0002106!1.94e-07!6;UBERON:0004457!1.94e-07!6;UBERON:0000042!1.94e-07!6;UBERON:0004854!1.94e-07!6;UBERON:0009034!1.94e-07!6;UBERON:0002095!1.94e-07!6;UBERON:0004782!1.94e-07!6;UBERON:0003281!1.94e-07!6;UBERON:0009664!1.94e-07!6;UBERON:0002296!1.94e-07!6;UBERON:0005602!1.94e-07!6;UBERON:0001179!1.94e-07!6;UBERON:0006293!1.94e-07!6;UBERON:0001048!2.38e-07!147;UBERON:0000490!3.02e-07!66;UBERON:0003887!5.04e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.81e-30,23;UBERON:0000974,5.81e-30,23;UBERON:0004807,5.81e-30,23;UBERON:0005058,5.81e-30,23;UBERON:0003351,5.81e-30,23;UBERON:0009113,5.81e-30,23;UBERON:0003295,5.81e-30,23;UBERON:0009722,5.81e-30,23;UBERON:0005562,5.81e-30,23;UBERON:0007690,5.81e-30,23;UBERON:0006562,1.15e-28,24;UBERON:0003408,1.15e-28,24;UBERON:0001557,1.15e-28,24;UBERON:0001042,1.15e-28,24;UBERON:0008814,1.15e-28,24;UBERON:0009145,1.15e-28,24;UBERON:0004177,6.45e-28,29;UBERON:0005057,6.45e-28,29;UBERON:0000072,2.39e-25,27;UBERON:0000077,6.62e-23,35;UBERON:0002193,2.63e-19,48;UBERON:0002405,2.63e-19,48;UBERON:0007811,1.06e-18,36;UBERON:0002390,1.64e-17,45;UBERON:0003061,1.64e-17,45;UBERON:0000065,2.90e-16,41;UBERON:0001004,7.59e-16,42;UBERON:0000153,1.90e-15,43;UBERON:0003929,8.75e-12,55;UBERON:0002368,1.09e-10,60;UBERON:0002530,9.30e-10,65;UBERON:0000490,1.37e-09,66;UBERON:0001041,3.36e-09,80;UBERON:0005911,4.13e-09,69;UBERON:0000949,1.14e-08,72;UBERON:0003081,2.47e-08,87;UBERON:0000029,3.67e-07,1;UBERON:0001097,3.67e-07,1;UBERON:0003968,3.67e-07,1;UBERON:0001467,3.67e-07,1|phase1_expression=0,0,0,0,0,0,0,4.64843964389675,0.281577444303333,0.70219357896598,0.34243593645101,0.239316476986009,2.9104124088305,3.4968160967599,0,0.202475267389826,0.699561878128147,0.315462165358238,0.685572168028694,0.42438965179803,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,2.84831672011889,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.518054945597687,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,1.36696704638282,0.206386867963223,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,3.47612232690996,0.405450430580328,0.410843828659309,0.77952493786677,0.537080087002444,0.993406773906324,2.76449533895928,1.9199638532695,2.92802704849628,2.209997392995,2.72230699869469,3.50848370663109,4.04089734889384,4.9088298916259,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:174439846..174439871,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:174439846..174439871,- | |||
|id=chr2:174439846..174439871,- | |||
|ontology_enrichment_celltype=CL:0000084!7.96e-14!11;CL:0000827!7.96e-14!11;CL:0000838!2.02e-12!12;CL:0000791!3.52e-12!9;CL:0000789!3.52e-12!9;CL:0002420!3.52e-12!9;CL:0002419!3.52e-12!9;CL:0000790!3.52e-12!9;CL:0000542!3.09e-11!13;CL:0000051!3.09e-11!13;CL:0000624!3.57e-11!8;CL:0002031!1.37e-10!25;CL:0000893!2.12e-08!6;CL:0002489!2.12e-08!6;CL:0000898!2.12e-08!6;CL:0000809!2.12e-08!6;CL:0000810!2.12e-08!6;CL:0000895!2.12e-08!6;CL:0000808!2.12e-08!6;CL:0000894!2.12e-08!6;CL:0000806!2.12e-08!6;CL:0000807!2.12e-08!6;CL:0000805!2.12e-08!6;CL:0002425!2.12e-08!6;CL:0002436!2.12e-08!6;CL:0002427!2.12e-08!6;CL:0002428!2.12e-08!6;CL:0002429!2.12e-08!6;CL:0002433!2.12e-08!6;CL:0002431!2.12e-08!6;CL:0002432!2.12e-08!6;CL:0000738!6.45e-08!17;CL:0002087!6.45e-08!17;CL:0000988!2.53e-07!32;CL:0002032!2.53e-07!32;CL:0000037!2.53e-07!32;CL:0000566!2.53e-07!32;CL:0000837!2.53e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.17e-12,8;CL:0000791,6.81e-11,9;CL:0000789,6.81e-11,9;CL:0002420,6.81e-11,9;CL:0002419,6.81e-11,9;CL:0000790,6.81e-11,9;CL:0000084,5.98e-09,11;CL:0000827,5.98e-09,11;CL:0000838,3.22e-08,12;CL:0000542,1.34e-07,13;CL:0000051,1.34e-07,13;CL:0000815,1.38e-07,1;CL:0000792,1.38e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.62e-29!29;UBERON:0002390!7.32e-24!45;UBERON:0003061!7.32e-24!45;UBERON:0002193!1.15e-23!48;UBERON:0002370!1.03e-22!23;UBERON:0000974!1.03e-22!23;UBERON:0004807!1.03e-22!23;UBERON:0005058!1.03e-22!23;UBERON:0003351!1.03e-22!23;UBERON:0009113!1.03e-22!23;UBERON:0003295!1.03e-22!23;UBERON:0009722!1.03e-22!23;UBERON:0005562!1.03e-22!23;UBERON:0007690!1.03e-22!23;UBERON:0006562!1.74e-21!24;UBERON:0003408!1.74e-21!24;UBERON:0001557!1.74e-21!24;UBERON:0001042!1.74e-21!24;UBERON:0008814!1.74e-21!24;UBERON:0009145!1.74e-21!24;UBERON:0005057!2.94e-19!51;UBERON:0002405!1.24e-18!70;UBERON:0000072!2.34e-18!27;UBERON:0003081!3.36e-14!88;UBERON:0000065!6.06e-14!41;UBERON:0001004!1.94e-13!42;UBERON:0001041!3.81e-13!92;UBERON:0000063!1.09e-12!35;UBERON:0002530!6.16e-12!65;UBERON:0000077!6.74e-12!97;UBERON:0002368!2.01e-11!60;UBERON:0003929!4.34e-10!55;UBERON:0005911!3.48e-09!69;UBERON:0003104!4.71e-09!131;UBERON:0009142!4.71e-09!131;UBERON:0000949!4.94e-09!72;UBERON:0004921!1.21e-08!126;UBERON:0004185!1.21e-08!126;UBERON:0001007!2.46e-08!128;UBERON:0001555!2.46e-08!128;UBERON:0007026!2.46e-08!128;UBERON:0000926!2.90e-08!193;UBERON:0004120!2.90e-08!193;UBERON:0006603!2.90e-08!193;UBERON:0004119!4.88e-08!130;UBERON:0000925!4.88e-08!130;UBERON:0006595!4.88e-08!130;UBERON:0002106!1.94e-07!6;UBERON:0004457!1.94e-07!6;UBERON:0000042!1.94e-07!6;UBERON:0004854!1.94e-07!6;UBERON:0009034!1.94e-07!6;UBERON:0002095!1.94e-07!6;UBERON:0004782!1.94e-07!6;UBERON:0003281!1.94e-07!6;UBERON:0009664!1.94e-07!6;UBERON:0002296!1.94e-07!6;UBERON:0005602!1.94e-07!6;UBERON:0001179!1.94e-07!6;UBERON:0006293!1.94e-07!6;UBERON:0001048!2.38e-07!147;UBERON:0000490!3.02e-07!66;UBERON:0003887!5.04e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.81e-30,23;UBERON:0000974,5.81e-30,23;UBERON:0004807,5.81e-30,23;UBERON:0005058,5.81e-30,23;UBERON:0003351,5.81e-30,23;UBERON:0009113,5.81e-30,23;UBERON:0003295,5.81e-30,23;UBERON:0009722,5.81e-30,23;UBERON:0005562,5.81e-30,23;UBERON:0007690,5.81e-30,23;UBERON:0006562,1.15e-28,24;UBERON:0003408,1.15e-28,24;UBERON:0001557,1.15e-28,24;UBERON:0001042,1.15e-28,24;UBERON:0008814,1.15e-28,24;UBERON:0009145,1.15e-28,24;UBERON:0004177,6.45e-28,29;UBERON:0005057,6.45e-28,29;UBERON:0000072,2.39e-25,27;UBERON:0000077,6.62e-23,35;UBERON:0002193,2.63e-19,48;UBERON:0002405,2.63e-19,48;UBERON:0007811,1.06e-18,36;UBERON:0002390,1.64e-17,45;UBERON:0003061,1.64e-17,45;UBERON:0000065,2.90e-16,41;UBERON:0001004,7.59e-16,42;UBERON:0000153,1.90e-15,43;UBERON:0003929,8.75e-12,55;UBERON:0002368,1.09e-10,60;UBERON:0002530,9.30e-10,65;UBERON:0000490,1.37e-09,66;UBERON:0001041,3.36e-09,80;UBERON:0005911,4.13e-09,69;UBERON:0000949,1.14e-08,72;UBERON:0003081,2.47e-08,87;UBERON:0000029,3.67e-07,1;UBERON:0001097,3.67e-07,1;UBERON:0003968,3.67e-07,1;UBERON:0001467,3.67e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,4.64843964389675,0.281577444303333,0.70219357896598,0.34243593645101,0.239316476986009,2.9104124088305,3.4968160967599,0,0.202475267389826,0.699561878128147,0.315462165358238,0.685572168028694,0.42438965179803,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,2.84831672011889,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0.518054945597687,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,1.36696704638282,0.206386867963223,0.185194527369712,0.565105371014073,0.410082683163076,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,3.47612232690996,0.405450430580328,0.410843828659309,0.77952493786677,0.537080087002444,0.993406773906324,2.76449533895928,1.9199638532695,2.92802704849628,2.209997392995,2.72230699869469,3.50848370663109,4.04089734889384,4.9088298916259,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:174439846..174439871,- | |||
}} |
Revision as of 23:08, 13 September 2013
Short description: | p@chr2:174439846..174439871, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:174439846..174439871, - |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.17e-12 | 8 |
mature alpha-beta T cell | 6.81e-11 | 9 |
alpha-beta T cell | 6.81e-11 | 9 |
immature T cell | 6.81e-11 | 9 |
mature T cell | 6.81e-11 | 9 |
immature alpha-beta T cell | 6.81e-11 | 9 |
T cell | 5.98e-09 | 11 |
pro-T cell | 5.98e-09 | 11 |
lymphoid lineage restricted progenitor cell | 3.22e-08 | 12 |
lymphocyte | 1.34e-07 | 13 |
common lymphoid progenitor | 1.34e-07 | 13 |
regulatory T cell | 1.38e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.38e-07 | 1 |
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