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FFCP PHASE1:Mm9::chr1:52856329..52856362,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=33|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:52856329..52856362,-|id=chr1:52856329..52856362,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!1.99e-10!24;UBERON:0002370!4.38e-10!23;UBERON:0000974!4.38e-10!23;UBERON:0004807!4.38e-10!23;UBERON:0005058!4.38e-10!23;UBERON:0003351!4.38e-10!23;UBERON:0009113!4.38e-10!23;UBERON:0003295!4.38e-10!23;UBERON:0009722!4.38e-10!23;UBERON:0005562!4.38e-10!23;UBERON:0007690!4.38e-10!23;UBERON:0006562!5.69e-10!24;UBERON:0001557!5.69e-10!24;UBERON:0001042!5.69e-10!24;UBERON:0008814!5.69e-10!24;UBERON:0009145!5.69e-10!24;UBERON:0004177!2.21e-09!29;UBERON:0000072!2.25e-08!27;UBERON:0002193!3.33e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.15e-24,23;UBERON:0000974,9.15e-24,23;UBERON:0004807,9.15e-24,23;UBERON:0005058,9.15e-24,23;UBERON:0003351,9.15e-24,23;UBERON:0009113,9.15e-24,23;UBERON:0003295,9.15e-24,23;UBERON:0009722,9.15e-24,23;UBERON:0005562,9.15e-24,23;UBERON:0007690,9.15e-24,23;UBERON:0006562,1.40e-22,24;UBERON:0003408,1.40e-22,24;UBERON:0001557,1.40e-22,24;UBERON:0001042,1.40e-22,24;UBERON:0008814,1.40e-22,24;UBERON:0009145,1.40e-22,24;UBERON:0004177,4.72e-20,29;UBERON:0005057,4.72e-20,29;UBERON:0000072,1.50e-19,27;UBERON:0002193,1.25e-17,48;UBERON:0002405,1.25e-17,48;UBERON:0002390,1.91e-17,45;UBERON:0003061,1.91e-17,45;UBERON:0000077,8.86e-16,35;UBERON:0007811,1.62e-13,36;UBERON:0000065,9.57e-13,41;UBERON:0001004,2.49e-12,42;UBERON:0000153,1.36e-10,43;UBERON:0003929,2.45e-08,55;UBERON:0004921,2.95e-08,114;UBERON:0001007,5.40e-08,116;UBERON:0001555,5.40e-08,116;UBERON:0007026,5.40e-08,116;UBERON:0004119,9.68e-08,118;UBERON:0000925,9.68e-08,118;UBERON:0006595,9.68e-08,118;UBERON:0002368,2.54e-07,60;UBERON:0002530,3.21e-07,65;UBERON:0003081,4.73e-07,87|phase1_expression=0,0.348975407639361,0.454999239389536,1.51232105653415,0,0.33575854382378,0.700837921786577,3.09895976259783,0.703943610758334,1.17032263160997,0.513653904676515,0.159544317990673,5.47842335779858,4.28359971853087,0.999329285446988,1.01237633694913,0,2.36596624018678,1.91960207048034,2.54633791078818,0.425216450755349,0.198581902401771,0,0.47997726838022,0.45881856213434,0.57423196411502,1.29228598847722,1.07735616342945,0.950117097281869,0.504060259519861,0.886922042621219,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,0,0,0,0.588231488031014,1.36609096991689,0.485510353031154,0.755380907853464,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0.167782606057736,3.62681071005672,0.672187598284928,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.91347103775248,1.55362730188303,0.29688427812965,0,0,0,0.301445281105245,0.352766121407114,0,0,0.433798070759735,0,0,0.220841518460394,0.484875253135222,0,0,0,2.81002760729451,0.11981512450592,0,0.381210681219194,0.149790639404823,1.83000241127451,0,0.521472960576829,1.53429274398198,1.24672826735736,0.486723789203273,0.509196819251581,0.373220911830279,0.758168275301024,0.210441855886474,0,0,0,0.150704817835715,0.408218994907967,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.350296027101508,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.658650345873152,0.671032093801859,0,0,2.97376904685418,0.793351699990633,0,0,0,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0.823494773620054,2.5133520880027,2.98434708061726,2.33956904542944,0.898819408654221,1.94524244887225,1.1948476395262,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0.358794827043824,0,1.47802552133284,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0,0.551873492609465,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,1.55056975900933,0.363533729477506,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.42366414172764,0,0.32977250588296,0,0.180938774784468,0.238744688006273,0.492422699235184,2.33184669303881,0.18542530201051,1.53783792718067,0,0,0.565105371014073,0.410082683163076,0.228778173206523,1.01987057996313,0.69975726161829,0.552799895217695,0,0,0,0,0,0.655087691238533,0.404593039154462,0.247960367176008,0,1.16653475962614,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0.288030006257865,4.74016680942267,1.82452693761148,2.15693010046137,3.63778304337826,2.32734704367726,3.17890167650024,3.4856680360791,7.23678683155428,4.64445669761479,5.86792411243499,6.65452821903147,5.06780979846713,5.77271049841977,5.84384510907845,0.226730383615211,0.887943813496259,3.22969883794113,0.503653849092235,0.579568782096571,0.375364950902364,0.36630324853453,0,1.00314420807073,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.499621155875892,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p@chr1:52856329..52856362,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=33
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr1:52856329..52856362,-
|id=chr1:52856329..52856362,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003408!1.99e-10!24;UBERON:0002370!4.38e-10!23;UBERON:0000974!4.38e-10!23;UBERON:0004807!4.38e-10!23;UBERON:0005058!4.38e-10!23;UBERON:0003351!4.38e-10!23;UBERON:0009113!4.38e-10!23;UBERON:0003295!4.38e-10!23;UBERON:0009722!4.38e-10!23;UBERON:0005562!4.38e-10!23;UBERON:0007690!4.38e-10!23;UBERON:0006562!5.69e-10!24;UBERON:0001557!5.69e-10!24;UBERON:0001042!5.69e-10!24;UBERON:0008814!5.69e-10!24;UBERON:0009145!5.69e-10!24;UBERON:0004177!2.21e-09!29;UBERON:0000072!2.25e-08!27;UBERON:0002193!3.33e-07!48
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.15e-24,23;UBERON:0000974,9.15e-24,23;UBERON:0004807,9.15e-24,23;UBERON:0005058,9.15e-24,23;UBERON:0003351,9.15e-24,23;UBERON:0009113,9.15e-24,23;UBERON:0003295,9.15e-24,23;UBERON:0009722,9.15e-24,23;UBERON:0005562,9.15e-24,23;UBERON:0007690,9.15e-24,23;UBERON:0006562,1.40e-22,24;UBERON:0003408,1.40e-22,24;UBERON:0001557,1.40e-22,24;UBERON:0001042,1.40e-22,24;UBERON:0008814,1.40e-22,24;UBERON:0009145,1.40e-22,24;UBERON:0004177,4.72e-20,29;UBERON:0005057,4.72e-20,29;UBERON:0000072,1.50e-19,27;UBERON:0002193,1.25e-17,48;UBERON:0002405,1.25e-17,48;UBERON:0002390,1.91e-17,45;UBERON:0003061,1.91e-17,45;UBERON:0000077,8.86e-16,35;UBERON:0007811,1.62e-13,36;UBERON:0000065,9.57e-13,41;UBERON:0001004,2.49e-12,42;UBERON:0000153,1.36e-10,43;UBERON:0003929,2.45e-08,55;UBERON:0004921,2.95e-08,114;UBERON:0001007,5.40e-08,116;UBERON:0001555,5.40e-08,116;UBERON:0007026,5.40e-08,116;UBERON:0004119,9.68e-08,118;UBERON:0000925,9.68e-08,118;UBERON:0006595,9.68e-08,118;UBERON:0002368,2.54e-07,60;UBERON:0002530,3.21e-07,65;UBERON:0003081,4.73e-07,87
|phase1_expression=0,0.348975407639361,0.454999239389536,1.51232105653415,0,0.33575854382378,0.700837921786577,3.09895976259783,0.703943610758334,1.17032263160997,0.513653904676515,0.159544317990673,5.47842335779858,4.28359971853087,0.999329285446988,1.01237633694913,0,2.36596624018678,1.91960207048034,2.54633791078818,0.425216450755349,0.198581902401771,0,0.47997726838022,0.45881856213434,0.57423196411502,1.29228598847722,1.07735616342945,0.950117097281869,0.504060259519861,0.886922042621219,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,0,0,0,0.588231488031014,1.36609096991689,0.485510353031154,0.755380907853464,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0.167782606057736,3.62681071005672,0.672187598284928,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0,0.91347103775248,1.55362730188303,0.29688427812965,0,0,0,0.301445281105245,0.352766121407114,0,0,0.433798070759735,0,0,0.220841518460394,0.484875253135222,0,0,0,2.81002760729451,0.11981512450592,0,0.381210681219194,0.149790639404823,1.83000241127451,0,0.521472960576829,1.53429274398198,1.24672826735736,0.486723789203273,0.509196819251581,0.373220911830279,0.758168275301024,0.210441855886474,0,0,0,0.150704817835715,0.408218994907967,0.12811372028485,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.350296027101508,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.658650345873152,0.671032093801859,0,0,2.97376904685418,0.793351699990633,0,0,0,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0.823494773620054,2.5133520880027,2.98434708061726,2.33956904542944,0.898819408654221,1.94524244887225,1.1948476395262,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0.358794827043824,0,1.47802552133284,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0,0.551873492609465,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0.292255857911312,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,1.55056975900933,0.363533729477506,0,0.316036757935816,0,0,2.04263763452273,0.18006109403131,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.42366414172764,0,0.32977250588296,0,0.180938774784468,0.238744688006273,0.492422699235184,2.33184669303881,0.18542530201051,1.53783792718067,0,0,0.565105371014073,0.410082683163076,0.228778173206523,1.01987057996313,0.69975726161829,0.552799895217695,0,0,0,0,0,0.655087691238533,0.404593039154462,0.247960367176008,0,1.16653475962614,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0.288030006257865,4.74016680942267,1.82452693761148,2.15693010046137,3.63778304337826,2.32734704367726,3.17890167650024,3.4856680360791,7.23678683155428,4.64445669761479,5.86792411243499,6.65452821903147,5.06780979846713,5.77271049841977,5.84384510907845,0.226730383615211,0.887943813496259,3.22969883794113,0.503653849092235,0.579568782096571,0.375364950902364,0.36630324853453,0,1.00314420807073,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.499621155875892,0.233931608445408,0,0.191288332068843,0,0.231867835620421
|short_description=p@chr1:52856329..52856362,-
}}

Revision as of 20:30, 13 September 2013

Short description:p@chr1:52856329..52856362, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr1:52856329..52856362, -
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr1:52856329..52856362-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I22.16
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C77.24
thymus, neonate N06.CNhs11197.681-26C44.64
thymus, neonate N07.CNhs11211.713-19D35.87
thymus, neonate N10.CNhs11194.748-24E46.65
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G75.77
thymus, neonate N30.CNhs11132.1393-42G25.84
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thymus9.15e-2423
neck9.15e-2423
respiratory system epithelium9.15e-2423
hemolymphoid system gland9.15e-2423
pharyngeal epithelium9.15e-2423
thymic region9.15e-2423
pharyngeal gland9.15e-2423
entire pharyngeal arch endoderm9.15e-2423
thymus primordium9.15e-2423
early pharyngeal endoderm9.15e-2423
pharynx1.40e-2224
gland of gut1.40e-2224
upper respiratory tract1.40e-2224
chordate pharynx1.40e-2224
pharyngeal arch system1.40e-2224
pharyngeal region of foregut1.40e-2224
hemopoietic organ4.72e-2029
immune organ4.72e-2029
segment of respiratory tract1.50e-1927
hemolymphoid system1.25e-1748
immune system1.25e-1748
hematopoietic system1.91e-1745
blood island1.91e-1745
mixed endoderm/mesoderm-derived structure8.86e-1635
craniocervical region1.62e-1336
respiratory tract9.57e-1341
respiratory system2.49e-1242
anterior region of body1.36e-1043
gut epithelium2.45e-0855
subdivision of digestive tract2.95e-08114
digestive system5.40e-08116
digestive tract5.40e-08116
primitive gut5.40e-08116
endoderm-derived structure9.68e-08118
endoderm9.68e-08118
presumptive endoderm9.68e-08118
endocrine gland2.54e-0760
gland3.21e-0765
lateral plate mesoderm4.73e-0787







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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