FFCP PHASE1:Mm9::chr19:5069690..5069705,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:5069690..5069705,+|id=chr19:5069690..5069705,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,4.91e-10,6;CL:0000187,4.91e-10,6;CL:0000056,4.91e-10,6;CL:0000222,1.50e-08,7;CL:0000192,2.69e-08,3;CL:0000359,2.69e-08,3;CL:0002539,2.69e-08,3;CL:0000514,2.69e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.50e-08,7;UBERON:0004710,1.50e-08,7;UBERON:0005419,1.50e-08,7;UBERON:0005417,1.50e-08,7;UBERON:0005729,1.50e-08,7;UBERON:0001135,2.69e-08,3;UBERON:0004237,2.69e-08,3;UBERON:0004695,2.69e-08,3;UBERON:0002111,2.69e-08,3;UBERON:0004178,2.69e-08,3;UBERON:0010708,1.96e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.82478476195126,1.65192076945513,3.12956537739216,0,0.439372365468944,0,0.979904951377538,0,0,0,0,1.28629718017973,0.286533439938757,1.03134418455488,0.202316460859598,0,0,0.677689064138264,0,0,0,0.7104801149461,2.39680088414724,0,0.103689612308478,0,0,0,0,0,0,0.919218786610021,1.10115880999389,0,0,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0,0,0,0.427115042397309,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,1.36344258062446,2.07828803682295,1.7666978725517,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0.922461989024234,0.904335843315735,0.587943535678524,0.753999547978053,0.741584903203122,0.289198713839823,0,0.647067399789637,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,1.62942982160506,0,0,0,0.650602214813519,0,0.360124259610698,0.90422890701429,0.204109497453984,0.640568601424249,0,0.517406741478031,0.215567992932842,1.13463648100692,1.23165786914764,1.31517439456545,1.39023624612799,1.74126083261083,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.350296027101508,0.16455984991348,0.492502392237286,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0.205809224758569,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,1.25667604400135,0,0.38992817423824,0,0,0,0.948339504765408,0.571242563048644,2.25415471346161,0.610953983535943,0.581857461502877,0.420814919341911,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.486405680325106,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0,0.651859905768103,0.678980343100753,0.938760993154008,0.837531287209079,0.714130922658041,0.585400943573396,0.945810864637146,2.43611158613652,2.23236676120482,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0.551873492609465,0,0.117211686592203,2.13115428989678,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.534196811001766,1.14020871547503,0.659880491890142,0,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0,0.516856586336442,0,1.06949213515416,0,0,1.03135543248187,0,0.18006109403131,0.776152102696527,1.28602221018955,0.177340233642274,0.178368817602071,0.987294123612726,0,0.23467170806371,0,0.220528398054962,0.16488625294148,1.13025098687134,1.44751019827574,0.477489376012546,0.328281799490123,0.874442509889552,0,0.170870880797853,1.23832120777933,0.925972636848558,0.753473828018764,0,0,0,0,0,0,1.26534397432454,0,0.972048067396211,0.418176592028937,1.09181281873089,0.539457385539283,0.578574190077352,0.523511883968059,0,0.621339313086926,0,0.747582730219894,0.165458490457098,0.972255941720238,0.645799117388655,1.01373675294467,0.58678619322877,0.911430693907651,0.104859344425711,0,0.288030006257865,0.316011120628178,0.202725215290164,0.616265742988964,0.129920822977795,0.716106782669926,0.39736270956253,0,0,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,1.15913756419314,0.563047426353546,1.28206136987086,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.512200817262403,0.729320151204882,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.754505365544305,0.468207537349412,0.448176066834085,0.17230640686684,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0,1.02860775715625,0.70990322463735,0.238436189947321,0,0.282328141245992,0.676916863133412,0.73171189149109,0.526139422875686,0.407412341537585,1.12228454331548,0.593175090620871,0.29551344712669,0.409231043169689,0,0.385813221962283,0.749431733813838,0.701794825336225,1.07435527024149,0.956441660344217,0.661774257358546,0.463735671240843|short_description=p@chr19:5069690..5069705,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:5069690..5069705,+ | |||
|id=chr19:5069690..5069705,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.91e-10,6;CL:0000187,4.91e-10,6;CL:0000056,4.91e-10,6;CL:0000222,1.50e-08,7;CL:0000192,2.69e-08,3;CL:0000359,2.69e-08,3;CL:0002539,2.69e-08,3;CL:0000514,2.69e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,1.50e-08,7;UBERON:0004710,1.50e-08,7;UBERON:0005419,1.50e-08,7;UBERON:0005417,1.50e-08,7;UBERON:0005729,1.50e-08,7;UBERON:0001135,2.69e-08,3;UBERON:0004237,2.69e-08,3;UBERON:0004695,2.69e-08,3;UBERON:0002111,2.69e-08,3;UBERON:0004178,2.69e-08,3;UBERON:0010708,1.96e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.82478476195126,1.65192076945513,3.12956537739216,0,0.439372365468944,0,0.979904951377538,0,0,0,0,1.28629718017973,0.286533439938757,1.03134418455488,0.202316460859598,0,0,0.677689064138264,0,0,0,0.7104801149461,2.39680088414724,0,0.103689612308478,0,0,0,0,0,0,0.919218786610021,1.10115880999389,0,0,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0,0,0,0.427115042397309,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,1.36344258062446,2.07828803682295,1.7666978725517,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0.922461989024234,0.904335843315735,0.587943535678524,0.753999547978053,0.741584903203122,0.289198713839823,0,0.647067399789637,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,1.62942982160506,0,0,0,0.650602214813519,0,0.360124259610698,0.90422890701429,0.204109497453984,0.640568601424249,0,0.517406741478031,0.215567992932842,1.13463648100692,1.23165786914764,1.31517439456545,1.39023624612799,1.74126083261083,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.350296027101508,0.16455984991348,0.492502392237286,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0.205809224758569,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,1.25667604400135,0,0.38992817423824,0,0,0,0.948339504765408,0.571242563048644,2.25415471346161,0.610953983535943,0.581857461502877,0.420814919341911,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0.486405680325106,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0,0.651859905768103,0.678980343100753,0.938760993154008,0.837531287209079,0.714130922658041,0.585400943573396,0.945810864637146,2.43611158613652,2.23236676120482,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0.551873492609465,0,0.117211686592203,2.13115428989678,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0.534196811001766,1.14020871547503,0.659880491890142,0,0.728341908464944,0.302323556964751,0.565815239267694,0.295301892880773,0,0.516856586336442,0,1.06949213515416,0,0,1.03135543248187,0,0.18006109403131,0.776152102696527,1.28602221018955,0.177340233642274,0.178368817602071,0.987294123612726,0,0.23467170806371,0,0.220528398054962,0.16488625294148,1.13025098687134,1.44751019827574,0.477489376012546,0.328281799490123,0.874442509889552,0,0.170870880797853,1.23832120777933,0.925972636848558,0.753473828018764,0,0,0,0,0,0,1.26534397432454,0,0.972048067396211,0.418176592028937,1.09181281873089,0.539457385539283,0.578574190077352,0.523511883968059,0,0.621339313086926,0,0.747582730219894,0.165458490457098,0.972255941720238,0.645799117388655,1.01373675294467,0.58678619322877,0.911430693907651,0.104859344425711,0,0.288030006257865,0.316011120628178,0.202725215290164,0.616265742988964,0.129920822977795,0.716106782669926,0.39736270956253,0,0,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,1.15913756419314,0.563047426353546,1.28206136987086,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.512200817262403,0.729320151204882,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.754505365544305,0.468207537349412,0.448176066834085,0.17230640686684,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0,1.02860775715625,0.70990322463735,0.238436189947321,0,0.282328141245992,0.676916863133412,0.73171189149109,0.526139422875686,0.407412341537585,1.12228454331548,0.593175090620871,0.29551344712669,0.409231043169689,0,0.385813221962283,0.749431733813838,0.701794825336225,1.07435527024149,0.956441660344217,0.661774257358546,0.463735671240843 | |||
|short_description=p@chr19:5069690..5069705,+ | |||
}} |
Revision as of 17:59, 13 September 2013
Short description: | p@chr19:5069690..5069705, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:5069690..5069705, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.91e-10 | 6 |
muscle cell | 4.91e-10 | 6 |
myoblast | 4.91e-10 | 6 |
mesodermal cell | 1.50e-08 | 7 |
smooth muscle cell | 2.69e-08 | 3 |
vascular associated smooth muscle cell | 2.69e-08 | 3 |
aortic smooth muscle cell | 2.69e-08 | 3 |
smooth muscle myoblast | 2.69e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
forelimb | 1.50e-08 | 7 |
pectoral appendage | 1.50e-08 | 7 |
pectoral appendage bud | 1.50e-08 | 7 |
forelimb bud | 1.50e-08 | 7 |
forelimb/pectoral fin field | 1.50e-08 | 7 |
smooth muscle tissue | 2.69e-08 | 3 |
blood vessel smooth muscle | 2.69e-08 | 3 |
arterial system smooth muscle | 2.69e-08 | 3 |
artery smooth muscle tissue | 2.69e-08 | 3 |
aorta smooth muscle tissue | 2.69e-08 | 3 |
pectoral complex | 1.96e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.